BEB

BEB
  • 文章类型: Journal Article
    这项临床研究的目的是评估非侵入性选择性蓝色过滤光致变色镜片涂层CrizalPrevencia对良性原发性眼睑痉挛(BEB)的治疗和反应的影响。
    在维也纳医科大学的门诊随机招募了24名患者,双盲,交叉研究设计。在BEB患者使用过滤眼镜片或安慰剂镜片进行干预之前和之后14天评估其眨眼频率。分别。结果参数包括六种不同条件下眨眼频率的分组分析:三种明视条件,一个休息状态,一个阅读条件,和一个视频游戏条件。
    来自24名招募的患者,15名患者可用于最终分析。将光学蓝色滤光透镜与安慰剂进行比较,在特定子测试中显示眨眼频率降低,但不能与基线相比。
    总而言之,光学过滤眼镜可能对BEB产生有益影响,并提供非侵入性治疗附加选项,除了肉毒杆菌神经毒素治疗,对于BEB患者,必须在多中心环境中进行进一步调查,导致更大的样本量,以获得有关BEB中光致变色蓝色滤光片眼镜效果的有效信息。临床试验注册:https://drks。de/search/en/trial/DRKS00032135,DRKS00032135.
    UNASSIGNED: The aim of this clinical study was to assess the impact of a non-invasive selective blue-filtering photochromic lens coating Crizal Prevencia on the treatment and response of benign essential blepharospasm (BEB).
    UNASSIGNED: Twenty-four patients were recruited in the outpatient clinic of the Medical University of Vienna in a randomized, double-blind, cross-over study design. Blink frequencies were assessed in patients with BEB before and 14 days after intervention with either a filtering ophthalmic lens or a placebo lens, respectively. Outcome parameters include sub-group analysis of a blink frequency under six different conditions: three photopic conditions, one resting condition, one reading condition, and one video game condition.
    UNASSIGNED: From 24 recruited patients, 15 patients were available for final analysis. Comparing the optical blue filtering lens to placebo, showed a reduced blink frequency in specific subtests, but not compared to baseline.
    UNASSIGNED: In conclusion, optical filtering glasses might have a beneficial effect on BEB and provide a non-invasive therapeutic add-on option, in addition to botulinum neurotoxin therapy, for patients with BEB and should necessarily be further investigated in a multicenter setting, resulting in larger sample sizes to gain valid information about the effect of photochromic blue filter glasses in BEB.Clinical trial registration: https://drks.de/search/en/trial/DRKS00032135, DRKS00032135.
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  • 文章类型: Journal Article
    对于植物病原真菌灰葡萄孢的综合基因表达分析,感染了许多植物类群,是全球农业重大损失的原因,我们开发了BEB,基于网络的B.cinerea基因表达浏览器。这种计算上便宜的基于网络的应用程序及其相关数据库包含用于灰霉病菌的手动管理的RNA-Seq数据。BEB通过提供描述转录水平的可发表热图,在不同培养条件下实现感兴趣基因的表达分析。不需要高级计算技能。BEB还提供了每个实验的详细信息以及用户定义的基因表达聚类和可视化选项。如果需要,基因表达值的表格可以下载进行进一步探索,包括,例如,差异表达基因的测定。BEB的实现是基于开源计算技术,可以部署到其他生物。在这种情况下,新的实施将仅受到纳入平台的转录组实验数量的限制。为了证明BEB的可用性和价值,我们分析了不同条件下的基因表达模式,专注于次级代谢物基因簇,全染色体基因表达,先前描述的毒力因子,和参考基因,提供了这些基因在该相关真菌植物病原体中的第一个全面表达概述。我们希望这个工具在B.cinerea研究中广泛有用,为功能测定的比较转录组学和候选基因鉴定提供基础。
    For comprehensive gene expression analyses of the phytopathogenic fungus Botrytis cinerea, which infects a number of plant taxa and is a cause of substantial agricultural losses worldwide, we developed BEB, a web-based B. cinerea gene Expression Browser. This computationally inexpensive web-based application and its associated database contain manually curated RNA-Seq data for B. cinerea. BEB enables expression analyses of genes of interest under different culture conditions by providing publication-ready heatmaps depicting transcript levels, without requiring advanced computational skills. BEB also provides details of each experiment and user-defined gene expression clustering and visualization options. If needed, tables of gene expression values can be downloaded for further exploration, including, for instance, the determination of differentially expressed genes. The BEB implementation is based on open-source computational technologies that can be deployed for other organisms. In this case, the new implementation will be limited only by the number of transcriptomic experiments that are incorporated into the platform. To demonstrate the usability and value of BEB, we analyzed gene expression patterns across different conditions, with a focus on secondary metabolite gene clusters, chromosome-wide gene expression, previously described virulence factors, and reference genes, providing the first comprehensive expression overview of these groups of genes in this relevant fungal phytopathogen. We expect this tool to be broadly useful in B. cinerea research, providing a basis for comparative transcriptomics and candidate gene identification for functional assays.
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  • 文章类型: Journal Article
    目的:我们旨在分析贝宁原发性眼睑痉挛(BEB)患者的眼泪,以探索畏光的可能的角膜结膜机制,泪液缺乏和眼痛。
    方法:使用42例诊断为BEB的患者的观察队列,我们做了Schirmer的测试,泪膜pH值的测量,泪膜蛋白电泳和结膜印模细胞学。
    结果:Schirmer的测试显示干眼症(8.4±9.7mm),其中71.3%的眼睛的Schirmer评分<10mm。令人惊讶的是,pH为碱性(8.4±0.4),接受标准治疗的患者每季度注射肉毒杆菌毒素(接受治疗的患者为8.32±0.36与未经治疗的患者为8.74±0.53;P=0.045)。一起,泪液蛋白电泳和结膜印模细胞学检查显示与BEB相关的结膜炎症。
    结论:第一次,这项研究强调角膜结膜机制来解释畏光,良性原发性眼睑痉挛的干眼症和疼痛。虽然令人鼓舞,补充研究仍有必要评估纠正泪膜pH值和炎症对眼睑痉挛患者生活质量的影响。
    OBJECTIVE: We aimed to analyze the tears of patients with Benin Essential Blepharospasm (BEB) to explore possible corneo-conjunctival mechanisms for photophobia, tear deficiency and ocular pain.
    METHODS: Using an observational cohort of 42 patients diagnosed with BEB, we performed Schirmer\'s testing, measurement of tear film pH, tear film protein electrophoresis and conjunctival impression cytology.
    RESULTS: Schirmer\'s testing showed dry eye (8.4±9.7mm) with 71.3% eyes having a Schirmer\'s score<10mm. Surprisingly, the pH was basic (8.4±0.4) and was improved in patients receiving the standard treatment of quarterly botulinum toxin injections (8.32±0.36 for treated patients vs. 8.74±0.53 for untreated patients; P=0.045). Together, tear protein electrophoresis and conjunctival impression cytology showed conjunctival inflammation associated with BEB.
    CONCLUSIONS: For the first time, this study emphasizes corneo-conjunctival mechanisms to explain the photophobia, dry eye and pain in Benign Essential Blepharospasm. While encouraging, complementary studies remain necessary to evaluate the effect of correcting tear film pH and inflammation on the quality of life of blepharospasm patients.
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  • 文章类型: Journal Article
    OBJECTIVE: Dystonia is characterised by sustained muscular contractions frequently producing repetitive, twisting and patterned movements. The primary aim of this systematic review was to establish how quality of life (QoL) is affected in idiopathic focal, multifocal and segmental dystonia. This review aimed to evaluate variations in QoL between different subtypes of dystonia, identify the determinants of QoL and assess the effects of different treatments on QoL.
    METHODS: A systematic computer-based literature search was conducted using the PubMed database to search for papers on QoL in idiopathic focal, segmental, multifocal and generalized dystonia. We identified 75 studies meeting our inclusion criteria. Information was extracted regarding prevalence, demographics and response to treatment where indicated.
    RESULTS: This review revealed QoL to be a significant yet often overlooked issue in idiopathic dystonia. Data consistently showed that dystonia has a negative effect on QoL in patients compared to healthy controls, when measured using disease-specific and generic QoL measures. The majority of studies (n = 25) involved patients with cervical dystonia, followed by benign-essential blepharospasm (n = 10). Along with the beneficial effect to the dystonia symptoms, treatment using Botulinum Toxin and Deep Brain Stimulation is also effective in improving overall QoL across the majority of subtypes.
    CONCLUSIONS: The findings demonstrate that patients\' QoL should routinely be assessed and monitored, as this may affect subsequent management. Further research will allow for more robust management of factors contributing to impaired QoL, aside from the physical defects found in dystonia.
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  • 文章类型: Journal Article
    毒液由于其强大的生理效应和动态进化而引起了极大的关注,包括用于毒液表达的同源基因的趋同募集。在这里,我们为甲壳动物高血糖激素(CHH)和节肢动物离子运输肽(ITP)超家族招募基因以在黑寡妇蜘蛛中表达毒液提供了新的证据。我们从西方黑寡妇蜘蛛(Latrodectushesperus)的毒腺cDNA中鉴定了latrodectin肽,棕色寡妇(Latrodectusgeometricus)和橱柜蜘蛛(Steatodagrossa)。这些序列与其他蜘蛛同源物的系统发育分析,蝎子和黄蜂毒液cDNA,以及CHH/ITP神经肽,将latrodectin显示为CHH/ITP超家族的衍生成员。这些分析表明,CHH/ITP同源物在蜘蛛毒液中更广泛,并招募了另外两个节肢动物谱系的毒液表达。我们还发现latrodectin2基因和几乎所有的CHH/ITP基因在同一位置包含2相内含子,支持latrodectin在CHH/ITP超家族中的放置。latrodectin的进化分析表明,沿某些序列谱系的阳性选择发作,以及特定密码子的阳性和纯化选择,支持其在寡妇毒液中的功能重要性。我们考虑这种对latrodectin进化的改进理解如何为其在黑寡妇毒液中的作用以及其在节肢动物中毒液表达的潜在趋同招募提供功能假设。
    Venoms have attracted enormous attention because of their potent physiological effects and dynamic evolution, including the convergent recruitment of homologous genes for venom expression. Here we provide novel evidence for the recruitment of genes from the Crustacean Hyperglycemic Hormone (CHH) and arthropod Ion Transport Peptide (ITP) superfamily for venom expression in black widow spiders. We characterized latrodectin peptides from venom gland cDNAs from the Western black widow spider (Latrodectus hesperus), the brown widow (Latrodectus geometricus) and cupboard spider (Steatoda grossa). Phylogenetic analyses of these sequences with homologs from other spider, scorpion and wasp venom cDNAs, as well as CHH/ITP neuropeptides, show latrodectins as derived members of the CHH/ITP superfamily. These analyses suggest that CHH/ITP homologs are more widespread in spider venoms, and were recruited for venom expression in two additional arthropod lineages. We also found that the latrodectin 2 gene and nearly all CHH/ITP genes include a phase 2 intron in the same position, supporting latrodectin\'s placement within the CHH/ITP superfamily. Evolutionary analyses of latrodectins suggest episodes of positive selection along some sequence lineages, and positive and purifying selection on specific codons, supporting its functional importance in widow venom. We consider how this improved understanding of latrodectin evolution informs functional hypotheses regarding its role in black widow venom as well as its potential convergent recruitment for venom expression across arthropods.
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  • 文章类型: Journal Article
    血管内皮生长因子(VEGF),已知在血管稳态中起重要作用,血管完整性和血管生成,对其五个成员的进化关系,尤其是基因复制和自然选择在VEGF家族进化中的作用知之甚少。在这项研究中,从NCBI的GenBank中提取了来自33种脊椎动物的75个全长cDNA序列,UniProt蛋白质数据库和Ensembl数据库。通过系统发育分析,我们调查了起源,养护,和VEGFs的进化。脊椎动物中的5个VEGF家族成员可能是由基因复制形成的。推断的进化转变将属于不同基因簇的成员分开,与功能特性的变化相关。选择分析和蛋白质结构分析相结合,以解释脊椎动物VEGF家族中位点特异性进化的关系。11个阳性选择点,在此过程中检测到一个跨膜区和活性位点。
    Vascular endothelial growth factor (VEGF), known to play an important role in vascular homeostasis, vascular integrity and angiogenesis, is little known about the evolutionary relationship of its five members especially the role of gene duplication and natural selection in the evolution of the VEGF family. In this study, seventy-five full-length cDNA sequences from 33 vertebrate species were extracted from the NCBI\'s GenBank, UniProt protein database and the Ensembl database. By phylogenetic analyses, we investigated the origin, conservation, and evolution of the VEGFs. Five VEGF family members in vertebrates might be formed by gene duplication. The inferred evolutionary transitions that separate members which belong to different gene clusters correlated with changes in functional properties. Selection analysis and protein structure analysis were combined to explain the relationship of the site-specific evolution in the vertebrate VEGF family. Eleven positive selection sites, one transmembrane region and the active sites were detected in this process.
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  • 文章类型: Journal Article
    Aquatic organisms such as cichlids, coelacanths, seals, and cetaceans are active in UV-blue color environments, but many of them mysteriously lost their abilities to detect these colors. The loss of these functions is a consequence of the pseudogenization of their short wavelength-sensitive (SWS1) opsin genes without gene duplication. We show that the SWS1 gene (BdenS1ψ) of the deep-sea fish, pearleye (Benthalbella dentata), became a pseudogene in a similar fashion about 130 million years ago (Mya) yet it is still transcribed. The rates of nucleotide substitution (~1.4 × 10(-9)/site/year) of the pseudogenes of these aquatic species as well as some prosimian and bat species are much smaller than the previous estimates for the globin and immunoglobulin pseudogenes.
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  • 文章类型: Journal Article
    Conotoxins from cone snails are valuable in physiology research and therapeutic applications. Evolutionary mechanisms of conotoxins have been investigated in several superfamilies, but there is no phylogenetic analysis on M-superfamily conotoxins. In this study, we characterized identical sequences, gene structure, novel cysteine frameworks, functions and evolutionary mechanisms of M-superfamily conotoxins. Identical M-superfamily conotoxins can be found in different Conus species from the analysis of novel 467 M-superfamily conotoxin sequences and other published M-superfamily conotoxins sequences. M-superfamily conotoxin genes consist of two introns and three exons from the results of genome walking. Eighteen cysteine frameworks were identified from the M-superfamily conotoxins, and 10 of the 18 may be generated from framework III. An analysis between diet types and phylogeny of the M-superfamily conotoxins indicate that M-superfamily conotoxins might not evolve in a concerted manner but were subject to birth-and-death evolution. Codon usage analysis shows that position-specific codon conservation is not restricted to cysteines, but also to other conserved residues. By analysing primary structures and physiological functions of M-superfamily conotoxins, we proposed a hypothesis that insertions and deletions, especially insertions in the third cysteine loop, are involved in the creation of new functions and structures of the M-superfamily conotoxins.
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