BAR

巴尔得-别德尔综合征
  • 文章类型: Journal Article
    严重发热伴血小板减少综合征(SFTS)与高死亡率相关,缺乏针对性的治疗计划。血尿素氮与白蛋白的比值,被称为BAR,是评估各种传染病前景的一种有价值的方法。这项研究的目的是评估BAR在预测SFTS个体结果方面的有效性。根据纳入和排除标准,本研究纳入了来自两个临床中心的4137例SFTS患者。分析生存组和死亡组之间SFTS患者的临床特征和测试参数。最小绝对收缩和选择算子(LASSO)回归和Cox回归表明,BAR可能作为初始阶段SFTS患者的独立预后指标(风险比=18.669,95%置信区间[CI]:8.558-40.725,p<0.001)。在AUC为0.832的SFTS患者中,BAR对临床结局具有更好的预测效果(95%CI:0.788-0.876,p<0.001),与C反应蛋白相比,截断值为0.19,灵敏度为0.812,特异性为0.726,降钙素原,血小板与淋巴细胞比值通过受试者工作特征曲线。KM(KaplanMeier)曲线表明,高水平的BAR与SFTS患者的不良生存状况有关。此外,高水平的BAR与长期住院和肾脏检查有关,肝脏,存活患者的凝血功能。所以,BAR可作为SFTS患者不良预后的早期预警生物标志物。
    Severe fever with thrombocytopenia syndrome (SFTS) is associated with a high death rate and lacks a targeted therapy plan. The ratio of blood urea nitrogen to albumin, known as BAR, is a valuable method for assessing the outlook of various infectious diseases. The objective of this research was to evaluate the effectiveness of BAR in forecasting the outcome of individuals with SFTS. Four hundred and thirty-seven patients with SFTS from two clinical centers were included in this study according to inclusion and exclusion criteria. Clinical characteristics and test parameters of SFTS patients were analyzed between survival and fatal groups. Least absolute shrinkage and selection operator (LASSO) regression and Cox regression suggested that BAR might serve as a standalone prognostic indicator for patients with SFTS in the initial phase (hazard ratio = 18.669, 95% confidence interval [CI]: 8.558-40.725, p < 0.001). And BAR had a better predictive effectiveness in clinical outcomes in patients with SFTS with an AUC of 0.832 (95% CI: 0.788-0.876, p < 0.001), a cutoff value of 0.19, a sensitivity of 0.812, and a specificity of 0.726 compared to C-reactive protein, procalcitonin, and platelet to lymphocyte ratio via receiver operating characteristic curve. KM (Kaplan Meier) curves demonstrated that high level of BAR was associated with poor survival condition in patients with SFTS. Furthermore, the high level of BAR was associated with long hospital stays and test paraments of kidney, liver, and coagulation function in survival patients. So, BAR could be used as a promising early warning biomarker of adverse outcomes in patients with SFTS.
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  • 文章类型: Journal Article
    Clathrin介导的内吞作用(CME)是所有真核生物中货物摄取的重要过程。在动物和酵母中,BAR-SH3结构域蛋白,内生蛋白和两栖蛋白,CME结束时的功能是招募囊泡分裂和脱膜的因素。拟南芥含有BAR-SH3结构域蛋白SH3P1-SH3P3,但对它们的作用知之甚少。这里,我们将SH3Ps鉴定为内皮素/两栖蛋白的功能同源物。SH3P1-SH3P3与质膜(PM)上的离散病灶结合,和SH3P2招募较晚到网格蛋白涂层凹坑的子集。SH3P2PM招聘模式与其互动者几乎相同,假定的未涂覆因素,AUXILIN-LIKE1.值得注意的是,SH3P1-SH3P3是PM的大多数AUXILIN-LIKE1招募所必需的。这表明CME的植物特异性修饰,其中BAR-SH3蛋白招募生长素样的脱衣因子,而不是脱衣磷酸酶,突触素.SH3P1-SH3P3与植物特异性内吞衔接子TPLATE复合物一起在整体CME中冗余地起作用,但不是由于其TASH3亚基中的SH3结构域。
    Clathrin-mediated endocytosis (CME) is an essential process of cargo uptake operating in all eukaryotes. In animals and yeast, BAR-SH3 domain proteins, endophilins and amphiphysins, function at the conclusion of CME to recruit factors for vesicle scission and uncoating. Arabidopsis thaliana contains the BAR-SH3 domain proteins SH3P1-SH3P3, but their role is poorly understood. Here, we identify SH3Ps as functional homologs of endophilin/amphiphysin. SH3P1-SH3P3 bind to discrete foci at the plasma membrane (PM), and SH3P2 recruits late to a subset of clathrin-coated pits. The SH3P2 PM recruitment pattern is nearly identical to its interactor, a putative uncoating factor, AUXILIN-LIKE1. Notably, SH3P1-SH3P3 are required for most of AUXILIN-LIKE1 recruitment to the PM. This indicates a plant-specific modification of CME, where BAR-SH3 proteins recruit auxilin-like uncoating factors rather than the uncoating phosphatases, synaptojanins. SH3P1-SH3P3 act redundantly in overall CME with the plant-specific endocytic adaptor TPLATE complex but not due to an SH3 domain in its TASH3 subunit.
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  • 文章类型: Journal Article
    生物滤池是饮用水中抗生素抗性基因(ARGs)和抗生素抗性细菌(ARB)的重要来源和汇。目前的研究通常从基因行为的角度将BAR在生物滤池中的流行归因于,即水平基因转移(HGT),对ARGs载体-ARB的关注很少。在这项研究中,我们提出了这样的假设,即ARB参与污染物的代谢过程并成为主导,是富集ARGs的重要途径。为了验证这一点,使用异养细菌平板计数法(HPC)对沙滤池的抗生素耐药性和细菌功能代谢途径进行了分析,高通量qPCR,IlluminaHiseq测序和PICRUSt2功能预测。结果表明,砂滤器流出物中ARB的显着泄漏,平均绝对丰度约为102-103CFU/mL。进一步的贡献分析表明,优势属,例如不动杆菌属。,气单胞菌属。,Elizabethkingiaspp.,和芽孢杆菌属。,是主要的ARGs宿主,赋予多种抗生素包括磺胺甲恶唑的耐药性,四环素和β-内酰胺。值得注意的是,这些ARGs宿主参与氮代谢,包括胞外硝酸盐/亚硝酸盐运输和亚硝酸盐还原,这对生物过滤器中的硝化和反硝化至关重要。例如,不动杆菌属。,过滤器中的优势细菌(相对丰度69.97%),贡献了大部分ARGs和53.79%的亚硝酸盐还原功能。也就是说,ARB可以通过参与氮代谢途径而占主导地位,促进ARGs的富集。这些发现从功能代谢的角度提供了对生物过滤器中ARGs稳定存在的见解,为出现的机制提供了重要的补充,维护,以及Barin饮用水的传播。
    Biofilters are the important source and sink of antibiotic resistance genes (ARGs) and antibiotic resistance bacteria (ARB) in the drinking water. Current studies generally ascribed the prevalence of BAR in biofilter from the perspective of gene behavior, i.e. horizontal gene transfer (HGT), little attentions have been paid on the ARGs carrier- ARB. In this study, we proposed the hypothesis that ARB participating in pollutant metabolism processes and becoming dominant is an important way for the enrichment of ARGs. To verify this, the antibiotic resistome and bacterial functional metabolic pathways of a sand filter was profiled using heterotrophic bacterial plate counting method (HPC), high-throughput qPCR, Illumina Hiseq sequencing and PICRUSt2 functional prediction. The results illustrated a significant leakage of ARB in the effluent of the sand filter with an average absolute abundance of approximately 102-103 CFU/mL. Further contribution analysis revealed that the dominant genera, such as Acinetobacter spp., Aeromonas spp., Elizabethkingia spp., and Bacillus spp., were primary ARGs hosts, conferring resistance to multiple antibiotics including sulfamethoxazole, tetracycline and β-lactams. Notably, these ARGs hosts were involved in nitrogen metabolism, including extracellular nitrate/nitrite transport and nitrite reduction, which are crucial in nitrification and denitrification in biofilters. For example, Acinetobacter spp., the dominant bacteria in the filter (relative abundance 69.97 %), contributed the majority of ARGs and 53.79 % of nitrite reduction function. That is, ARB can predominate by participating in the nitrogen metabolism pathways, facilitating the enrichment of ARGs. These findings provide insights into the stable presence of ARGs in biofilters from a functional metabolism perspective, offering a significant supplementary to the mechanisms of the emergence, maintenance, and transmission of BARin drinking water.
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  • 文章类型: Journal Article
    本研究旨在探讨尿素氮与血清白蛋白比值(BAR)与急性肾损伤(AKI)患者全因死亡率的关系,并评估BAR对AKI预后的影响。
    在一项回顾性队列研究中选择了在医学信息集市重症监护IV(MIMIC-IV)中入住ICU的成年AKI患者。使用初始血尿素氮(mg/dl)/血清白蛋白(g/dl)计算BAR(mg/g)。根据BAR,这些患者分为四分位数(Q1-Q4).采用Kaplan-Meier分析比较上述四组的死亡率。多因素Cox回归分析用于评估BAR与28天死亡率和365天死亡率之间的关联。绘制受试者工作特征(ROC)曲线,计算曲线下面积(AUC),亚组分析最终通过相关协变量分层。
    本研究共纳入12,125例AKI患者。28天和365天死亡率分别为23.89和39.07%,分别。Kaplan-Meier分析显示,高BAR患者的全因死亡率显著增加(Log-rankp<0.001)。多因素Cox回归分析显示,BAR是28天死亡率的独立危险因素(4.3213.03:HR2.07,95%CI1.32,p<0.001;B4.63%B93%1.64BAR预测28天死亡率和365天死亡率的AUC分别为0.649和0.662,优于血尿素氮和序贯器官衰竭的评估。此外,亚组分析显示,AKI患者的BAR与不良结局之间存在稳定的关系.
    BAR与AKI患者全因死亡率增加显著相关。这一发现表明,BAR可能有助于识别具有高死亡风险的AKI患者。
    UNASSIGNED: This study aims to investigate the relationship between blood urea nitrogen to serum albumin ratio (BAR) and all-cause mortality in patients with acute kidney injury (AKI) and evaluate the effect of BAR on the prognosis of AKI.
    UNASSIGNED: Adult patients with AKI admitted to the ICU in the Medical Information Mart for Intensive Care IV (MIMIC-IV) were selected in a retrospective cohort study. BAR (mg/g) was calculated using initial blood urea nitrogen (mg/dl)/serum albumin (g/dl). According to the BAR, these patients were divided into quartiles (Q1-Q4). Kaplan-Meier analysis was used to compare the mortality of the above four groups. Multivariate Cox regression analysis was used to evaluate the association between BAR and 28-day mortality and 365-day mortality. The receiver operating characteristic (ROC) curve was plotted and the area under the curve (AUC) was calculated, and the subgroup analysis was finally stratified by relevant covariates.
    UNASSIGNED: A total of 12,125 patients with AKI were included in this study. The 28-day and 365-day mortality rates were 23.89 and 39.07%, respectively. Kaplan-Meier analysis showed a significant increase in all-cause mortality in patients with high BAR (Log-rank p < 0.001). Multivariate Cox regression analysis showed that BAR was an independent risk factor for 28-day mortality (4.32 < BAR≤7.14: HR 1.12, 95% CI 0.97-1.30, p = 0.114; 7.14 < BAR≤13.03: HR 1.51, 95% CI 1.31-1.75, p < 0.001; BAR>13.03: HR 2.07, 95% CI 1.74-2.47, p < 0.001; Reference BAR≤4.32) and 365-day mortality (4.32 < BAR≤7.14: HR 1.22, 95% CI 1.09-1.36, p < 0.001; 7.14 < BAR≤13.03: HR 1.63, 95% CI 1.46-1.82, p < 0.001; BAR>13.03: HR 2.22, 95% CI 1.93-2.54, p < 0.001; Reference BAR ≤ 4.32) in patients with AKI. The AUC of BAR for predicting 28-day mortality and 365-day mortality was 0.649 and 0.662, respectively, which is better than that of blood urea nitrogen and sequential organ failure assessment. In addition, subgroup analysis showed a stable relationship between BAR and adverse outcomes in patients with AKI.
    UNASSIGNED: BAR is significantly associated with increased all-cause mortality in patients with AKI. This finding suggests that BAR may help identify people with AKI at high risk of mortality.
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  • 文章类型: Journal Article
    简介:胸肌稳定器通常用于漏斗胸修复中的钢筋固定。我们旨在通过回顾我们在使用双侧,单边,并且没有稳定器放置。方法:回顾性单儿科中心对2001年12月至2019年7月期间接受了漏斗胸微创酒吧放置和随后的酒吧移除术的患者进行了回顾。人口统计数据,关于手术的细节,使用的棒材和稳定器的数量,并收集了后续信息。稳定剂相关的并发症包括需要移除稳定剂的疼痛,手术部位感染(SSIs),和钢筋位移。数据以具有四分位数间距(IQR)的中位数和频率(百分比)表示。结果:共纳入561例患者。该队列主要是男性(83.1%,n=466),放置酒吧时的中位年龄为15岁(IQR12.4,16.3),中位哈勒指数为3.8(IQR3.4,4.5)。仅在双侧稳定剂组中观察到归因于需要去除的稳定剂部位的疼痛(2.5%,n=13)。与稳定器部位相关的SSI发生在1.8%(n=9)的双侧稳定器病例和2.1%(n=1)的单侧稳定器病例中。在0.6%(n=3)的双侧稳定器病例中观察到杆位移,其中2例患者也患有SSI。无稳定剂组无并发症发生。结论:随着趋势朝着单边和不使用稳定剂的方向发展,我们观察到需要移除稳定器的疼痛病例较少,而杆位移没有增加。
    Introduction: Pectus bar stabilizers are routinely used for bar fixation in the repair of pectus excavatum. We aimed to determine the optimum technique for bar fixation by reviewing our institutional experience with the use of bilateral, unilateral, and no stabilizer placement. Methods: Retrospective single pediatric center review of patients who underwent minimally invasive bar placement for pectus excavatum and subsequent bar removal between December 2001 and July 2019 was performed. Demographic data, details about the surgery, the number of bars and stabilizers used, and follow-up information were collected. Stabilizer-related complications included pain requiring stabilizer removal, surgical site infections (SSIs), and bar displacement. Data are presented as medians with interquartile ranges (IQRs) and frequencies with percentages. Results: A total of 561 patients were included. The cohort was predominantly male (83.1%, n = 466) with a median age at the time of bar placement of 15 years (IQR 12.4, 16.3) and a median Haller index of 3.8 (IQR 3.4, 4.5). Pain attributed to the stabilizer site that required removal was observed only in the bilateral stabilizer group (2.5%, n = 13). SSI related to the stabilizer site occurred in 1.8% (n = 9) of the bilateral stabilizer cases and 2.1% (n = 1) of the unilateral stabilizer cases. Bar displacement was observed in 0.6% (n = 3) of the bilateral stabilizer cases and 2 of those patients also had an SSI. There were no complications in the no stabilizer group. Conclusion: As the trend moves toward unilateral and no stabilizer use, we observe fewer cases of pain requiring stabilizer removal with no increase in bar displacements.
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  • 文章类型: Journal Article
    雌激素受体α(ERα)驱动与乳腺癌(BC)进展有关的基因的转录,依靠协同调节蛋白募集来实现其转录和生物学活性。ERα的突变及其调节蛋白的异常募集有助于肿瘤适应和耐药性。因此,了解ERα蛋白相互作用网络的动态变化对于阐明BC的耐药机制至关重要。尽管在研究ERα相关蛋白方面取得了进展,捕获亚细胞瞬时相互作用仍然具有挑战性,因此,大量的重要相互作用仍未被发现。在这项研究中,我们采用了通过抗体识别(BAR)的生物素化,一种创新的基于抗体的邻近标记(PL)方法,结合质谱来研究ERα近端蛋白质组及其与芳香化酶抑制抗性相关的变化,用于治疗ERα阳性BC的关键疗法。我们证明BAR成功检测到大多数已知的ERα相互作用物,并主要鉴定了核蛋白,使用表位标签或内源性抗体靶向ERα。我们进一步描述了与电阻相关的ERα近端蛋白质组重新布线,将BAR应用于一组临床上模拟肿瘤适应的等基因细胞系。有趣的是,我们发现ERα与抗性细胞中的一些典型辅因子相关,一些近端蛋白质组变化是由于ERα表达增加所致。抗性模型还显示雌激素调节基因的水平降低。在ERα(Y537C)中带有突变的敏感和抗性细胞显示出相似的近端蛋白质组。我们提供了一个ERα近端蛋白质网络,覆盖了几个新的ERα近端伴侣。这些包括参与高度动态过程的蛋白质,例如传统蛋白质相互作用方法难以检测的sumoylation和泛素化。总的来说,我们提出BAR作为在空间环境中研究ERα近端蛋白质组的有效方法,并证明其在不同实验条件下的应用。
    Estrogen receptor α (ERα) drives the transcription of genes involved in breast cancer (BC) progression, relying on coregulatory protein recruitment for its transcriptional and biological activities. Mutation of ERα as well as aberrant recruitment of its regulatory proteins contribute to tumor adaptation and drug resistance. Therefore, understanding the dynamic changes in ERα protein interaction networks is crucial for elucidating drug resistance mechanisms in BC. Despite progress in studying ERα-associated proteins, capturing subcellular transient interactions remains challenging and, as a result, significant number of important interactions remain undiscovered. In this study, we employed biotinylation by antibody recognition (BAR), an innovative antibody-based proximity labeling (PL) approach, coupled with mass spectrometry to investigate the ERα proximal proteome and its changes associated with resistance to aromatase inhibition, a key therapy used in the treatment of ERα-positive BC. We show that BAR successfully detected most of the known ERα interactors and mainly identified nuclear proteins, using either an epitope tag or endogenous antibody to target ERα. We further describe the ERα proximal proteome rewiring associated with resistance applying BAR to a panel of isogenic cell lines modeling tumor adaptation in the clinic. Interestingly, we find that ERα associates with some of the canonical cofactors in resistant cells and several proximal proteome changes are due to increased expression of ERα. Resistant models also show decreased levels of estrogen-regulated genes. Sensitive and resistant cells harboring a mutation in the ERα (Y537C) revealed a similar proximal proteome. We provide an ERα proximal protein network covering several novel ERα-proximal partners. These include proteins involved in highly dynamic processes such as sumoylation and ubiquitination difficult to detect with traditional protein interaction approaches. Overall, we present BAR as an effective approach to investigate the ERα proximal proteome in a spatial context and demonstrate its application in different experimental conditions.
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  • 文章类型: Journal Article
    目的:本研究的目的是比较钴铬定制棒材与不同制造工艺铸造金属棒材的配合,使用扫描电子显微镜研磨棒和3D打印棒。
    方法:制备透明环氧树脂模具。在每个模具中嵌入彼此相距14mm距离的两个平行植入物。构造了30个Co-Cr定制条,并将其平均分为三组:组(I)(Co-Crconv),组(II)碾磨棒(钴铬碾磨),和组(III)印刷棒(Co-Cr印刷)。使用扫描电子显微镜(SEM)扫描植入物-基台界面处的边缘配合。
    结果:三个研究组之间的边缘失配在植入物和制造棒之间存在显着差异,p值<0.001。Co-Cr常规组(7.95±2.21μm)的微间隙距离最高,其次是Co-Cr3D打印组(4.98±1.73),Co-Cr铣削组的微间隙距离较低(3.22±0.75)。
    结论:碾磨的边缘配合,Co-Cr合金的3D打印和常规铸造在临床上可接受的失配范围内。CAD/CAM铣削的Co-Cr棒在种植体-基台界面处显示出较好的内部配合。随后是选择性激光熔化(SLM)3D打印棒,并且显示了使用常规失蜡技术的定制棒的最小配合。
    The purpose of the invitro research was to compare the fit of Cobalt Chromium customized bar fabricated with different manufacturing processes cast metal bar, milled bar and 3D printed bar using scanning electron microscope.
    Clear epoxy resin molds were prepared. In each mold two parallel implants with a 14 mm distance from each other were embedded. Thirty Co-Cr custom bars were constructed and were divided equally into three groups: Group (I) (Co-Cr conv), group (II) milled bar (Co-Cr milled), and group (III) printed bar (Co-Cr print). The marginal fit at implant-abutment interface was scanned using scanning electron microscope (SEM).
    There was a significant difference between the three studied groups regarding marginal misfit the between implant and fabricated bars with p-value < 0.001. The highest value of micro-gap distance was found in Co-Cr conventional group (7.95 ± 2.21 μm) followed by Co-Cr 3D printed group (4.98 ± 1.73) and the lower value were found in Co-Cr milled (3.22 ± 0.75).
    The marginal fit of milled, 3D printed and conventional cast for Co-Cr alloy were within the clinically acceptable range of misfit. CAD/CAM milled Co-Cr bar revealed a superior internal fit at the implant-abutment interface. This was followed by selective laser melting (SLM) 3D printed bar and the least fit was shown for customized bar with the conventional lost wax technique.
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  • 文章类型: Journal Article
    聚合物材料显示出用于各种牙科应用的巨大前景。制造商通常基于标准化(ISO和ASTM)试样尺寸和负载条件提供挠曲强度信息。不清楚,然而,如果弯曲强度数据可以预测牙冠的临床表现。这项研究的目的是,因此,为了确定弯曲强度,通过三点弯曲(3PB)测量,将预测通过牙冠紧缩(CTC)测试评估的失效载荷。三种品牌的聚合物(Trilor,Juvora,和Pekkton)制成矩形条和完全轮廓的冠(每个聚合物品牌的10个标本,每种形状30个标本)。差示扫描量热法(DSC),傅里叶变换红外光谱(FTIR),和燃烧测试用于表征/确认材料。棒材在3PB中进行了盲目测试,以确定弯曲强度,并对牙冠进行CTC测试,以确定接触树脂基台后的破坏载荷。通过单因素方差分析(α=0.05)和皮尔逊相关系数评价检验结果的统计学意义,而回归分析用于检验3PB和CTC结果之间的相关性.使用扫描电子显微镜(SEM)表征了断裂机理和破坏表面特征。钢筋的平均冠破坏载荷(Trilor(7033N)>Juvora(5217N)>Pekkton(3023N))和平均抗弯强度(Trilor(468MPa)>Juvora(197MPa)=Pekkton(192MPa))存在显着差异(p<0.05)。材料和内含变形(Juvora)之间的牙冠断裂模式不同,韧性脆性断裂(Pekkton),以及裂纹和变形的组合(Trilor)。对于任何测试的材料,弯曲强度与相应的牙冠破坏载荷均不相关。这些结果表明,牙科医生不应该依赖三点弯曲试验报告的弯曲强度,正如制造商所宣传的那样,预测聚合物冠的性能。
    Polymeric materials show great promise for use in a variety of dental applications. Manufacturers generally provide flexural strength information based on standardized (ISO and ASTM) specimen dimensions and loading conditions. It is not clear, however, if flexural strength data are predictive of the clinical performance of dental crowns. The objectives of this study were, therefore, to determine whether flexural strengths, as measured via three-point bending (3PB), would be predictive of failure loads assessed via crunch-the-crown (CTC) tests. Three brands of polymers (Trilor, Juvora, and Pekkton) were fabricated into rectangular bars and fully contoured crowns (10 specimens of each polymer brand, 30 specimens of each shape). Differential scanning calorimetry (DSC), Fourier transform infrared spectroscopy (FTIR), and burn off tests were used to characterize/confirm the materials. Bars were tested blindly in 3PB to determine flexural strength, and crowns were CTC-tested to determine failure load after luting to resin abutments. The statistical significance of the test results was evaluated via one-way ANOVA (α = 0.05) and Pearson\'s correlation coefficient, while regression analysis was used to test for a correlation between 3PB and CTC results. The fracture mechanisms and failure surface characteristics were characterized using scanning electron microscopy (SEM). There were significant differences (p < 0.05) in the mean crown failure loads (Trilor (7033 N) > Juvora (5217 N) > Pekkton (3023 N)) and mean flexural strengths of the bars (Trilor (468 MPa) > Juvora (197 MPa) = Pekkton (192 MPa)). The mode of crown fracture was different between the materials and included deformation (Juvora), ductile-to-brittle fracture (Pekkton), and a combination of cracks and deformation (Trilor). Flexural strengths did not correlate with the corresponding crown failure loads for any of the materials tested. These results suggest that dental practitioners should not rely on the flexural strengths reported from three-point bending tests, as advertised by the manufacturer, to predict the performance of polymeric crowns.
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  • 文章类型: Journal Article
    杂草严重影响作物的产量和质量。因为人工除草费时费力,除草剂的使用成为解决田间杂草危害的有效方法。5-烯醇式丙酮酸莽草酸-3-磷酸合成酶(EPSPS)和乙酰转移酶基因(抗bialaphos,BAR)被广泛用于提高作物对除草剂的抗性。然而,棉花,作为最重要的天然纤维作物,在中国对除草剂不耐受,EPSPS和BAR家族基因尚未在棉花中得到鉴定。因此,我们探索这两个家族的基因,为研究除草剂抗性机制提供候选基因。在这项研究中,在同种四倍体陆地棉和巴巴多斯棉中鉴定出8、8、4和5个EPSPS基因和6、6、5和5个BAR基因,二倍体植物园棉和雷蒙迪棉属,分别。根据系统发育树的分布,将EPSPS和BAR家族的成员分为三个亚组,保守的图案,和基因结构。此外,EPSPS和BAR家族成员的启动子序列包括生长发育,压力,和激素相关的顺式元素。基于表达式分析,家族成员表现出组织特异性表达,并且对非生物胁迫的反应显着不同。最后,qRT-PCR分析表明,外源喷施除草剂后,GhEPSPS3,GhEPSPS4和GhBAR1的表达水平显着上调。总的来说,我们在全基因组水平上表征了棉花的EPSPS和BAR基因家族,这将为进一步研究EPSPS和BAR基因在生长发育和除草剂胁迫中的功能奠定基础。
    Weeds seriously affect the yield and quality of crops. Because manual weeding is time-consuming and laborious, the use of herbicides becomes an effective way to solve the harm caused by weeds in fields. Both 5-enolpyruvyl shikimate-3-phosphate synthetase (EPSPS) and acetyltransferase genes (bialaphos resistance, BAR) are widely used to improve crop resistance to herbicides. However, cotton, as the most important natural fiber crop, is not tolerant to herbicides in China, and the EPSPS and BAR family genes have not yet been characterized in cotton. Therefore, we explore the genes of these two families to provide candidate genes for the study of herbicide resistance mechanisms. In this study, 8, 8, 4, and 5 EPSPS genes and 6, 6, 5, and 5 BAR genes were identified in allotetraploid Gossypium hirsutum and Gossypium barbadense, diploid Gossypium arboreum and Gossypium raimondii, respectively. Members of the EPSPS and BAR families were classified into three subgroups based on the distribution of phylogenetic trees, conserved motifs, and gene structures. In addition, the promoter sequences of EPSPS and BAR family members included growth and development, stress, and hormone-related cis-elements. Based on the expression analysis, the family members showed tissue-specific expression and differed significantly in response to abiotic stresses. Finally, qRT-PCR analysis revealed that the expression levels of GhEPSPS3, GhEPSPS4, and GhBAR1 were significantly upregulated after exogenous spraying of herbicides. Overall, we characterized the EPSPS and BAR gene families of cotton at the genome-wide level, which will provide a basis for further studying the functions of EPSPS and BAR genes during growth and development and herbicide stress.
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  • 文章类型: Journal Article
    背景:血尿素氮与白蛋白比值(BAR)越来越被认为是危重患者短期预后的早期预测指标,但在危重手术患者中,BAR与长期结局的相关性仍未得到充分研究.
    方法:我们招募了2015年至2020年在台中退伍军人总医院接受外科重症监护病房(ICU)的连续患者,死亡日期从台湾的国家健康保险研究数据库中检索。除了Cox回归,我们还使用倾向评分匹配来确定变量的住院后一年死亡率的风险比(HR)和95%置信区间(CIs).
    结果:共纳入8073名合格受试者进行分析。我们发现年龄,男性,高Charlson合并症指数,高急性生理学和慢性健康评估II评分,阳性微生物培养,白细胞增多是死亡率的预测因子,而高体重指数,计划手术,高血小板计数是长期死亡的保护因素.校正上述协变量后,高BAR与住院后死亡率增加独立相关(adjHR1.258,95%CI,1.127-1.405)。值得注意的是,在女性和合并疾病较少、危重病严重程度较低的患者中,这种关联往往更强.倾向得分匹配,将受试者除以高于或低于6的BAR,显示了第1周BAR与住院后死亡率之间的一致关联(adjHR1.503,95%CI1.247-1.811).
    结论:BAR是新发现的短期结局预测因子,我们确定了长期结果相关因素,包括BAR,确定的因素可能有助于对从外科ICU出院的患者进行长期结局的风险分层。
    Blood urea nitrogen to albumin ratio (BAR) is increasingly recognized as an early predictor for short-term outcomes in critically ill patients, but the association of BAR with long-term outcomes in critically ill surgical patients remains underexplored.
    We enrolled consecutive patients who were admitted to surgical intensive care units (ICUs) at Taichung Veterans General Hospital between 2015 and 2020, and the dates of death were retrieved from Taiwan\'s National Health Insurance Research Database. In addition to Cox regression, we also used propensity score matching to determine the hazard ratios (HRs) and 95% confidence intervals (CIs) for one-year post-hospital mortality of the variables.
    A total of 8,073 eligible subjects were included for analyses. We found that age, male gender, high Charlson Comorbidity Index, high Acute Physiology and Chronic Health Evaluation II score, positive microbial culture, and leukocytosis were predictors for mortality, whereas high body mass index, scheduled surgery, and high platelet counts were protective factors against long-term mortality. The high BAR was independently associated with increased post-hospital mortality after adjustment for the aforementioned covariates (adjHR 1.258, 95% CI, 1.127-1.405). Notably, the association tended to be stronger in females and patients with fewer comorbidities and lower disease severity of critical illness. The propensity score matching, dividing subjects by BAR higher or lower than 6, showed a consistent association between week-one BAR and post-hospital mortality (adjHR 1.503, 95% CI 1.247-1.811).
    BAR is a newly identified predictor of short-term outcome, and we identified long-term outcome-relevant factors, including BAR, and the identified factors may be useful for risk stratification of long-term outcomes in patients discharged from surgical ICUs.
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