Automated patch-clamp

自动膜片钳
  • 文章类型: Journal Article
    背景:传统的“全细胞膜片钳”记录技术被广泛用于测量静息膜电位(VM)和解剖离体血管内皮细胞中潜在的膜离子电导。
    方法:这里,我们评估了自动膜片钳(APC)技术,用平面基板代替传统的贴片移液器,以允许缺乏电生理学正式培训的研究人员在相对较短的时间内生成大量数据,可用于表征血管内皮细胞的生物电活性。我们评估了Port-a-Patch平面膜片钳系统是否,被认为是市场上最小的电生理钻机,可用于测量人脑血管内皮细胞系中的VM和静息膜电流,hCMEC/D3。
    方法:我们证明了Port-a-Patch平面膜片钳系统提供的静息VM值与常规膜片钳技术提供的值相同。此外,APC技术提供的初步数据表明,hCMEC/D3细胞的静息VM主要由Cl-和Na+贡献,正如许多其他类型的内皮细胞的膜片钳技术所证明的那样。
    结论:Port-a-Patch平面膜片钳系统可成功用于测量hCMEC/D3细胞中的静息VM和基础膜离子电导。我们设想这种易于使用的APC系统对于研究可以通过化学激活的膜电流也非常有用,热,以及该细胞系以及其他类型的分离血管内皮细胞中的机械刺激。
    BACKGROUND: The conventional \"whole-cell patch-clamp\" recording technique is widely used to measure the resting membrane potential (VM) and to dissect the underlying membrane ionic conductances in isolated vascular endothelial cells.
    METHODS: Herein, we assessed whether the automated patch-clamp (APC) technology, which replaces the traditional patch-pipette with a planar substrate to permit researchers lacking formal training in electrophysiology to generate large amounts of data in a relatively short time, can be used to characterize the bioelectrical activity of vascular endothelial cells. We assessed whether the Port-a-Patch planar patch-clamp system, which is regarded as the smallest electrophysiological rig available on the market, can be used to measure the VM and resting membrane currents in the human cerebrovascular endothelial cell line, hCMEC/D3.
    METHODS: We demonstrated that the Port-a-Patch planar patch-clamp system provides the same values of the resting VM as those provided by the conventional patch-clamp technique. Furthermore, the APC technology provides preliminary data demonstrating that the resting VM of hCMEC/D3 cells is primarily contributed by Cl- and Na+, as demonstrated with the patch-clamp technique for many other endothelial cell types.
    CONCLUSIONS: The Port-a-Patch planar patch-clamp system can be successfully used to measure the resting VM and the underlying membrane ionic conductances in hCMEC/D3 cells. We envisage that this easy-to-use APC system could also be extremely useful for the investigation of the membrane currents that can be activated by chemical, thermal, optical, and mechanical stimuli in this cell line as well as in other types of isolated vascular endothelial cells.
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  • 文章类型: Journal Article
    电压门控离子通道(VGIC)是在可兴奋细胞中传输电信号至关重要的完整膜蛋白。了解这些离子通道的动力学需要使用表达单一类型离子通道基因的遗传修饰细胞系进行膜片钳实验。然而,该过程依赖于细胞系的持续维持,以确保膜片钳实验样品细胞的充足供应.自动膜片钳方法的进步使研究人员能够显着增加每个实验的膜片钳细胞数量,从几个细胞到多达384个细胞。尽管取得了这些进展,制备细胞样品的手动任务仍然是VGIC动力学筛选的重要瓶颈。在这里,我们描述了一种方法来解决这一挑战,通过产生可以冷冻并与膜片钳实验分开储存的准备记录(RTR)VGIC表达细胞。细胞样品制备过程与膜片钳实验的这种解耦提供了在手动或自动膜片钳系统上研究VGIC的简化方法。
    Voltage-gated ion channels (VGICs) are integral membrane proteins crucial for transmitting electrical signals in excitable cells. Understanding the kinetics of these ion channels requires conducting patch-clamp experiments using genetically modified cell lines that express a single type of ion channel gene. However, this process relies on the continuous maintenance of cell lines to ensure an adequate supply of sample cells for patch-clamp experiments. Advancements in automated patch-clamp methods have enabled researchers to significantly increase the number of patch-clamped cells per experiment, from just a few cells to as many as 384 cells. Despite this progress, the manual task of preparing the cell samples remains a significant bottleneck in the kinetic screening of VGICs. Here we describe a method to address this challenge by generating ready-to-record (RTR) VGIC-expressing cells that can be frozen and stored separately from patch-clamp experiments. This decoupling of the cell sample preparation process from the patch-clamp experiments offers a streamlined approach to studying VGICs on manual or an automated patch-clamp system.
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  • 文章类型: Journal Article
    大量研究报道了GABAAR亚基基因与癫痫之间的关联,饮食失调,自闭症谱系障碍,神经发育障碍,和双相情感障碍。这项研究旨在找到一些潜在的正变构调节剂,并通过将计算机模拟方法与对其实际活性的进一步体外评估相结合来进行。我们从GABAAR-地西泮复合物开始,并组装了脂质嵌入的蛋白质集合,以通过分子动力学(MD)模拟对其进行完善。然后,我们专注于α1β2γ2与某些Z药物(非苯并二氮杂化合物)的相互作用,使用诱导拟合对接(IFD)进入松弛的结合位点以生成药效团模型。用参考集验证药效团模型,并在主对接程序之前应用于减少预过滤的Enamine数据库。最后,我们成功地鉴定了一组化合物,满足对接模型的所有功能。评估这些化合物在小鼠血浆中的水溶性和稳定性。然后使用具有异源表达的人α1β2γ2GABAA受体的大鼠Purkinje神经元和CHO细胞测试了它们的生物活性。使用全细胞膜片钳记录来揭示GABA诱导的电流。我们的研究为发现GABAA受体的新型正变构调节剂提供了方便且可调的模型。对最大的可用化合物数据库的高通量虚拟筛选导致选择23种化合物。进一步的电生理测试使我们能够确定一组3种最杰出的活性化合物。考虑到前导化合物的结构特征,这项研究很快就会发展成为MedChem项目。
    Numerous studies reported an association between GABAA R subunit genes and epilepsy, eating disorders, autism spectrum disorders, neurodevelopmental disorders, and bipolar disorders. This study was aimed to find some potential positive allosteric modulators and was performed by combining the in silico approach with further in vitro evaluation of its real activity. We started from the GABAA R-diazepam complexes and assembled a lipid embedded protein ensemble to refine it via molecular dynamics (MD) simulation. Then we focused on the interaction of α1β2γ2 with some Z-drugs (non-benzodiazepine compounds) using an Induced Fit Docking (IFD) into the relaxed binding site to generate a pharmacophore model. The pharmacophore model was validated with a reference set and applied to decrease the pre-filtered Enamine database before the main docking procedure. Finally, we succeeded in identifying a set of compounds, which met all features of the docking model. The aqueous solubility and stability of these compounds in mouse plasma were assessed. Then they were tested for the biological activity using the rat Purkinje neurons and CHO cells with heterologously expressed human α1β2γ2 GABAA receptors. Whole-cell patch clamp recordings were used to reveal the GABA induced currents. Our study represents a convenient and tunable model for the discovery of novel positive allosteric modulators of GABAA receptors. A High-throughput virtual screening of the largest available database of chemical compounds resulted in the selection of 23 compounds. Further electrophysiological tests allowed us to determine a set of 3 the most outstanding active compounds. Considering the structural features of leader compounds, the study can develop into the MedChem project soon.
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  • 文章类型: Journal Article
    高通量自动化膜片钳技术的发展是Brugada综合征研究领域的最新突破。Brugada综合征是一种心脏疾病,其特征是心电图读数异常,心律失常导致心脏猝死的风险增加。各种实验模型,在动物中发展,细胞系,人体组织或计算模拟,在促进我们对这种情况的理解方面发挥着至关重要的作用,并开发有效的治疗方法。从离子通道的病理生理作用及其药理学的角度来看,自动膜片钳涉及一个机器人系统,能够同时记录多个单细胞的电活动,大大提高了数据采集的速度和效率。通过将这种方法与使用患者来源的心肌细胞相结合,研究人员对心脏病的潜在机制有了更全面的认识。这导致了针对受心血管疾病影响的患者开发更有效的治疗方法。
    The development of high-throughput automated patch-clamp technology is a recent breakthrough in the field of Brugada syndrome research. Brugada syndrome is a heart disorder marked by abnormal electrocardiographic readings and an elevated risk of sudden cardiac death due to arrhythmias. Various experimental models, developed either in animals, cell lines, human tissue or computational simulation, play a crucial role in advancing our understanding of this condition, and developing effective treatments. In the perspective of the pathophysiological role of ion channels and their pharmacology, automated patch-clamp involves a robotic system that enables the simultaneous recording of electrical activity from multiple single cells at once, greatly improving the speed and efficiency of data collection. By combining this approach with the use of patient-derived cardiomyocytes, researchers are gaining a more comprehensive view of the underlying mechanisms of heart disease. This has led to the development of more effective treatments for those affected by cardiovascular conditions.
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  • 文章类型: Journal Article
    全面的体外致心律失常试验(CiPA)促进了药物对心脏复极化作用的计算机模拟模型的使用,以改善致心律失常的风险预测。这些模型包含描述药物与hERG通道结合的药效学成分,这需要阻断动力学的体外数据。除了效力,来约束他们。迄今为止,已经使用来自手动膜片钳的数据进行了开发和验证.这种方法的大规模应用需要开发高通量,自动膜片钳(APC)实施。这里,我们对米尔恩斯的实施进行了全面的分析,或CiPA动态协议,在APC平台上,包括质量控制和数据分析。对bepridil的动力学和阻滞效力进行了评估,西沙必利,特非那定和维拉帕米的数据保留/质量控制合格率为21.8%,或高达50.4%时,只有适当的扫描长度被认为是药物具有更快的动力学。手动和APC之间的IC50和动力学的可变性与先前的APC效力研究中的位点/平台之间观察到的相当。虽然实验成功少于单独的效力筛选中观察到的,它仍然明显大于手动补丁。随着协议设计的修改,包括扫描长度,重复次数,和本研究中建议的泄漏校正,该方案可应用于APC,以获得与手动膜片钳相当的数据.
    The Comprehensive in vitro Proarrhythmic Assay (CiPA) has promoted use of in silico models of drug effects on cardiac repolarization to improve proarrhythmic risk prediction. These models contain a pharmacodynamic component describing drug binding to hERG channels that required in vitro data for kinetics of block, in addition to potency, to constrain them. To date, development and validation has been undertaken using data from manual patch-clamp. The application of this approach at scale requires the development of a high-throughput, automated patch-clamp (APC) implementation. Here, we present a comprehensive analysis of the implementation of the Milnes, or CiPA dynamic protocol, on an APC platform, including quality control and data analysis. Kinetics and potency of block were assessed for bepridil, cisapride, terfenadine and verapamil with data retention/QC pass rate of 21.8% overall, or as high as 50.4% when only appropriate sweep lengths were considered for drugs with faster kinetics. The variability in IC50 and kinetics between manual and APC was comparable to that seen between sites/platforms in previous APC studies of potency. Whilst the experimental success is less than observed in screens of potency alone, it is still significantly greater than manual patch. With the modifications to protocol design, including sweep length, number of repetitions, and leak correction recommended in this study, this protocol can be applied on APC to acquire data comparable to manual patch clamp.
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  • 文章类型: Journal Article
    大电导,钙/电压门控钾通道(BK)调节关键的身体过程,包括神经元,分泌和平滑肌(SM)功能。虽然形成BK的α亚基无处不在,辅助beta1亚基在SM中高度表达。这使得beta1成为治疗SM疾病的药物开发的有吸引力的目标,如高血压或脑血管痉挛。已鉴定出通过beta1激活BK的化合物,然而,它们表现出低效力和脱靶效应,而通过β1限制激动剂活性的拮抗剂仍未开发.Beta1依赖的基于BK配体的药效团建模和ZINC数据库搜索确定了15个市售命中。在CHO细胞中获得了BKαβ1亚基介导的电流的浓度响应曲线。一种有效的(EC50=20nM)和高效的激活剂(最大激活=×10.3对照)与一种有效的拮抗剂(KB=3.02nM)一起被鉴定,两者都依赖于beta1。我们的研究提供了第一个原理证明,即激动剂/拮抗剂对可用于控制含β1的BK活性。
    Large conductance, calcium/voltage-gated potassium channels (BK) regulate critical body processes, including neuronal, secretory and smooth muscle (SM) function. While BK-forming alpha subunits are ubiquitous, accessory beta1 subunits are highly expressed in SM. This makes beta1 an attractive target for pharmaceutical development to treat SM disorders, such as hypertension or cerebrovascular spasm. Compounds activating BK via beta1 have been identified, yet they exhibit low potency and off-target effects while antagonists that limit agonist activity via beta 1 remain unexplored. Beta1-dependent BK ligand-based pharmacophore modeling and ZINC database searches identified 15 commercially available hits. Concentration-response curves on BK alpha + beta1 subunit-mediated currents were obtained in CHO cells. One potent (EC50 = 20 nM) and highly efficacious activator (maximal activation = ×10.3 of control) was identified along with a potent antagonist (KB = 3.02 nM), both of which were dependent on beta1. Our study provides the first proof-of-principle that an agonist/antagonist pair can be used to control beta1-containing BK activity.
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  • 文章类型: Journal Article
    α-银环蛇毒素是一种很大的,含有5个二硫键的74个氨基酸毒素,最初在银环蛇的毒液中发现。像大多数大型毒素一样,α-银环蛇毒素的化学合成具有挑战性,解释为什么所有以前的报道都使用纯化或重组的α-银环蛇毒素。然而,只有化学合成允许容易插入非天然氨基酸或新的化学官能团。在这里,我们描述了一种化学合成荧光标记的α-银环蛇毒素的方法。全长肽被设计为通过添加戊炔酸接头在氨基末端包括炔烃官能团。α-银环蛇毒素的化学合成需要在连续步骤中基于酰肼的三个肽片段的偶联。氧化折叠完成后,通过点击化学将叠氮化物修饰的Cy5荧光团偶联到毒素上。接下来,我们确定了荧光标记的α-银环蛇毒素在TE671细胞中阻断乙酰胆碱(ACh)介导的电流以响应肌肉烟碱受体激活的功效.使用自动膜片钳记录,我们证明了荧光合成的α-银环蛇毒素对烟碱受体具有预期的纳摩尔亲和力。通过与模拟α-银环蛇毒素结合位点的20聚体肽孵育,可以取代荧光α-银环蛇毒素的阻断作用。此外,TE671细胞可以用荧光毒素标记,正如共聚焦显微镜所见证的那样,这种标记被20聚体竞争肽部分取代。因此,我们证明了合成的荧光标记的α-银环蛇毒素保留了与肌肉烟碱受体结合的优异特性。
    α-bungarotoxin is a large, 74 amino acid toxin containing five disulphide bridges, initially identified in the venom of Bungarus multicinctus snake. Like most large toxins, chemical synthesis of α-bungarotoxin is challenging, explaining why all previous reports use purified or recombinant α-bungarotoxin. However, only chemical synthesis allows easy insertion of non-natural amino acids or new chemical functionalities. Herein, we describe a procedure for the chemical synthesis of a fluorescent-tagged α-bungarotoxin. The full-length peptide was designed to include an alkyne function at the amino-terminus through the addition of a pentynoic acid linker. Chemical synthesis of α-bungarotoxin requires hydrazide-based coupling of three peptide fragments in successive steps. After completion of the oxidative folding, an azide-modified Cy5 fluorophore was coupled by click chemistry onto the toxin. Next, we determined the efficacy of the fluorescent-tagged α-bungarotoxin to block acetylcholine (ACh)-mediated currents in response to muscle nicotinic receptor activation in TE671 cells. Using automated patch-clamp recordings, we demonstrate that fluorescent synthetic α-bungarotoxin has the expected nanomolar affinity for the nicotinic receptor. The blocking effect of fluorescent α-bungarotoxin could be displaced by incubation with a 20-mer peptide mimicking the α-bungarotoxin binding site. In addition, TE671 cells could be labelled with fluorescent toxin, as witnessed by confocal microscopy, and this labelling was partially displaced by the 20-mer competitive peptide. We thus demonstrate that synthetic fluorescent-tagged α-bungarotoxin preserves excellent properties for binding onto muscle nicotinic receptors.
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  • 文章类型: Editorial
    暂无摘要。
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  • 文章类型: Journal Article
    Huwentoxin-IV (HwTx-IV), a peptide discovered in the venom of the Chinese bird spider Cyriopagopus schmidti, has been reported to be a potent antinociceptive compound due to its action on the genetically-validated NaV1.7 pain target. Using this peptide for antinociceptive applications in vivo suffers from one major drawback, namely its negative impact on the neuromuscular system. Although studied only recently, this effect appears to be due to an interaction between the peptide and the NaV1.6 channel subtype located at the presynaptic level. The aim of this work was to investigate how HwTx-IV could be modified in order to alter the original human (h) NaV1.7/NaV1.6 selectivity ratio of 23. Nineteen HwTx-IV analogues were chemically synthesized and tested for their blocking effects on the Na+ currents flowing through these two channel subtypes stably expressed in cell lines. Dose-response curves for these analogues were generated, thanks to the use of an automated patch-clamp system. Several key amino acid positions were targeted owing to the information provided by earlier structure-activity relationship (SAR) studies. Among the analogues tested, the potency of HwTx-IV E4K was significantly improved for hNaV1.6, leading to a decreased hNaV1.7/hNaV1.6 selectivity ratio (close to 1). Similar decreased selectivity ratios, but with increased potency for both subtypes, were observed for HwTx-IV analogues that combine a substitution at position 4 with a modification of amino acid 1 or 26 (HwTx-IV E1G/E4G and HwTx-IV E4K/R26Q). In contrast, increased selectivity ratios (>46) were obtained if the E4K mutation was combined to an additional double substitution (R 26A/Y33W) or simply by further substituting the C-terminal amidation of the peptide by a carboxylated motif, linked to a marked loss of potency on hNaV1.6 in this latter case. These results demonstrate that it is possible to significantly modulate the selectivity ratio for these two channel subtypes in order to improve the potency of a given analogue for hNaV1.6 and/or hNaV1.7 subtypes. In addition, selective analogues for hNaV1.7, possessing better safety profiles, were produced to limit neuromuscular impairments.
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  • 文章类型: Journal Article
    SCN5AR1623Q突变是胎儿和新生儿患者中与严重先天性长QT综合征3(LQT3)相关的最常见的遗传变异之一。为了研究R1623Q突变的特性,我们从一名携带杂合R1623Q突变的LQTS患者中建立了诱导多能干细胞(iPSC)心肌细胞(CM)模型.使用多电极阵列系统表征iPSC-CM的性质和药理学响应。生物物理特征分析显示R1623Q增加了钠通道的开放概率和持续电流,表明功能增益突变。在药理学研究中,美西律缩短了R1623Q-iPSC-CM中的FPDcF,表现出由Fridericia公式校正的延长的场电位持续时间(FPDcF,类似于QTcF)。同时,E4031,人类ether-a-go-go相关基因(hERG)通道的特异性抑制剂,在去极化(EAD)事件后早期,心律失常样的频率显着增加。这些特征部分反映了患者的表型。进一步分析新生儿同工型的效果,主要在胎儿期表达,关于R1623Q突变体的性质,我们将对照的成年型和新生型SCN5A和R1623Q突变SCN5A基因转染至293T细胞。全细胞自动膜片钳记录显示,R1623Q增加了持续的Na+电流,表明功能增益突变。我们的研究结果表明,携带LQT3相关R1623Q突变的iPSC-CM可用于评估对治疗药物的药理反应并提高治疗效果。此外,新生儿/成人Nav1.5亚型的发育转换可能与胎儿和新生儿严重长QT综合征的病理机制有关。
    The SCN5A R1623Q mutation is one of the most common genetic variants associated with severe congenital long QT syndrome 3 (LQT3) in fetal and neonatal patients. To investigate the properties of the R1623Q mutation, we established an induced pluripotent stem cell (iPSC) cardiomyocyte (CM) model from a patient with LQTS harboring a heterozygous R1623Q mutation. The properties and pharmacological responses of iPSC-CMs were characterized using a multi-electrode array system. The biophysical characteristic analysis revealed that R1623Q increased open probability and persistent currents of sodium channel, indicating a gain-of-function mutation. In the pharmacological study, mexiletine shortened FPDcF in R1623Q-iPSC-CMs, which exhibited prolonged field potential duration corrected by Fridericia\'s formula (FPDcF, analogous to QTcF). Meanwhile, E4031, a specific inhibitor of human ether-a-go-go-related gene (hERG) channel, significantly increased the frequency of arrhythmia-like early after depolarization (EAD) events. These characteristics partly reflect the patient phenotypes. To further analyze the effect of neonatal isoform, which is predominantly expressed in the fetal period, on the R1623Q mutant properties, we transfected adult form and neonatal isoform SCN5A of control and R1623Q mutant SCN5A genes to 293T cells. Whole-cell automated patch-clamp recordings revealed that R1623Q increased persistent Na+ currents, indicating a gain-of-function mutation. Our findings demonstrate the utility of LQT3-associated R1623Q mutation-harboring iPSC-CMs for assessing pharmacological responses to therapeutic drugs and improving treatment efficacy. Furthermore, developmental switching of neonatal/adult Nav1.5 isoforms may be involved in the pathological mechanisms underlying severe long QT syndrome in fetuses and neonates.
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