Atomic Force Microscopy

原子力显微镜
  • 文章类型: Journal Article
    集体细胞迁移是一种新兴现象,远程小区通信受各种因素的影响,包括力的传递,单个细胞的粘弹性,底物相互作用,和机械转换。我们研究了细胞-底物距离波动的变化,细胞-基质粘附,和牵引力影响由野生型(WT)MDCKII细胞或小带闭塞(ZO)-1/2耗竭的MDCKII细胞(双敲低[dKD])代表高度收缩的细胞形成的融合单层的平均速度和时空相关性。数据表明,与收缩较少的WT细胞相比,融合的dKD单层表现出降低的平均速度,并伴随着增加的底物粘附,降低牵引力,更紧凑的形状,细胞间相互作用减少,和减少细胞-底物距离波动。基础肌动蛋白和肌球蛋白的消耗进一步支持了短程细胞-底物相互作用的概念,特别是由基础肌动球蛋白驱动的波动,在较大的长度尺度上显著影响单层的迁移速度。
    Collective cell migration is an emergent phenomenon, with long-range cell-cell communication influenced by various factors, including transmission of forces, viscoelasticity of individual cells, substrate interactions, and mechanotransduction. We investigate how alterations in cell-substrate distance fluctuations, cell-substrate adhesion, and traction forces impact the average velocity and temporal-spatial correlation of confluent monolayers formed by either wild-type (WT) MDCKII cells or zonula occludens (ZO)-1/2-depleted MDCKII cells (double knockdown [dKD]) representing highly contractile cells. The data indicate that confluent dKD monolayers exhibit decreased average velocity compared to less contractile WT cells concomitant with increased substrate adhesion, reduced traction forces, a more compact shape, diminished cell-cell interactions, and reduced cell-substrate distance fluctuations. Depletion of basal actin and myosin further supports the notion that short-range cell-substrate interactions, particularly fluctuations driven by basal actomyosin, significantly influence the migration speed of the monolayer on a larger length scale.
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  • 文章类型: Journal Article
    对抗抗微生物耐药性的需求变得越来越紧迫。在这里,我们研究了一种小型阳离子剂的工作机理,N-烷基酰胺3d,通过常规和高速原子力显微镜。我们显示N-烷基酰胺3d与金黄色葡萄球菌膜相互作用,它改变了脂质结构域的组织和动力学。在这个初始步骤之后,抗菌剂的超分子结构逐渐附着在受影响的膜的顶部,完全覆盖它。这些结果表明,细菌膜中的侧向结构域可能比预期的更频繁地受到小的抗微生物剂的影响。同时,我们显示了N-烷基酰胺3d的新的双步活性,不仅破坏了侧膜组织,而且还有效地用聚集体覆盖了整个膜。这最后一步可以使膜从外部无法接近,并可能阻止活细菌的信号和废物处理。
    The need to combat antimicrobial resistance is becoming more and more pressing. Here we investigate the working mechanism of a small cationic agent, N-alkylamide 3d, by conventional and high-speed atomic force microscopy. We show that N-alkylamide 3d interacts with the membrane of Staphylococcus aureus, where it changes the organization and dynamics of lipid domains. After this initial step, supramolecular structures of the antimicrobial agent attach on top of the affected membrane gradually, covering it entirely. These results demonstrate that lateral domains in the bacterial membranes might be affected by small antimicrobial agents more often than anticipated. At the same time, we show a new dual-step activity of N-alkylamide 3d that not only destroys the lateral membrane organization but also effectively covers the whole membrane with aggregates. This final step could render the membrane inaccessible from the outside and possibly prevent signaling and waste disposal of living bacteria.
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  • 文章类型: Journal Article
    内膜,包括内皮和内皮下基质,在动脉粥样硬化的发病机制中起着至关重要的作用。血流(d流)紊乱和动脉壁变硬引起的机械应力会导致内皮功能障碍。然而,这些物理力对内膜机械环境的具体影响仍不确定。这里,我们研究了抑制胶原交联是否可以改善持续d流对内膜机械性能的不利影响。在C57BL/6J小鼠中进行左颈动脉(LCA)的部分结扎,诱导d流。右颈动脉(RCA)作为内部对照。手术后2天和2周收集颈动脉,以研究d流对内膜机械表型的急性和慢性影响。通过施用β-氨基丙腈(BAPN),d流的慢性作用与随后的动脉壁硬化无关,通过赖氨酰氧化酶(LOX)酶的胶原交联的抑制剂。原子力显微镜(AFM)用于确定面部颈动脉制剂中内皮和内皮下基质的硬度。还确定了在柔软和坚硬的水凝胶上培养的人主动脉内皮细胞(HAEC)的硬度。急性暴露于d流导致雄性小鼠的内皮硬度略有降低,但对两种性别的内皮下基质的硬度均无影响。不管性别,完整的内皮比内皮下基质软。相比之下,暴露于慢性d流导致两种性别的内皮和内皮下僵硬度大幅增加。同时施用BAPN在很大程度上防止了慢性d流的影响。此外,HAEC在柔软与柔软上培养时显示出降低的刚度硬水凝胶。我们得出的结论是,慢性d流导致动脉内膜明显变硬,可以通过抑制胶原交联来有效地防止。
    The intima, comprising the endothelium and the subendothelial matrix, plays a crucial role in atherosclerosis pathogenesis. The mechanical stress arising from disturbed blood flow (d-flow) and the stiffening of the arterial wall contributes to endothelial dysfunction. However, the specific impacts of these physical forces on the mechanical environment of the intima remain undetermined. Here, we investigated whether inhibiting collagen crosslinking could ameliorate the detrimental effects of persistent d-flow on the mechanical properties of the intima. Partial ligation of the left carotid artery (LCA) was performed in C57BL/6J mice, inducing d-flow. The right carotid artery (RCA) served as an internal control. Carotids were collected 2 days and 2 weeks after surgery to study acute and chronic effects of d-flow on the mechanical phenotype of the intima. The chronic effects of d-flow were decoupled from the ensuing arterial wall stiffening by administration of β-aminopropionitrile (BAPN), an inhibitor of collagen crosslinking by lysyl oxidase (LOX) enzymes. Atomic force microscopy (AFM) was used to determine stiffness of the endothelium and the denuded subendothelial matrix in en face carotid preparations. The stiffness of human aortic endothelial cells (HAEC) cultured on soft and stiff hydrogels was also determined. Acute exposure to d-flow caused a slight decrease in endothelial stiffness in male mice but had no effect on the stiffness of the subendothelial matrix in either sex. Regardless of sex, the intact endothelium was softer than the subendothelial matrix. In contrast, exposure to chronic d-flow led to a substantial increase in the endothelial and subendothelial stiffness in both sexes. The effects of chronic d-flow were largely prevented by concurrent BAPN administration. In addition, HAEC displayed reduced stiffness when cultured on soft vs. stiff hydrogels. We conclude that chronic d-flow results in marked stiffening of the arterial intima, which can be effectively prevented by inhibition of collagen crosslinking.
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  • 文章类型: Journal Article
    在水-油界面处组装的纳米颗粒表面活性剂可以显着降低界面张力并且可以用于稳定液体。了解并积极调整产生的膜的机械性能,其中包括纳米粒子表面活性剂,对纳米颗粒的界面行为和水净化具有重要的基本意义,药物封装,提高石油采收率,和创新的能量转换应用。这里,我们介绍了静电相互作用驱动的直径最大为0.10mm的独立式和紧密堆积的SiO2表面活性剂膜的制造。厚度为20-30nm的膜跨越直径为2μm的孔,表现出的杨氏模量范围从1.5到5.9GPa。发现制造的纳米颗粒表面活性剂膜的可控弹性特性由纳米颗粒和配体之间的相互作用强度决定,在配体和配体之间,和纳米颗粒表面活性剂之间。结果为制造和开发基于纳米表面活性剂的大面积纳米粒子提供了一种有效的方法,独立式,以及具有大规模精细可调机械性能的超薄膜。
    Nanoparticle surfactants assembled at water-oil interfaces can significantly lower the interfacial tension and can be used to stabilize liquids. Understanding and actively tuning the mechanical properties of the generated membranes, which comprise the nanoparticle surfactants, are of significant fundamental interest for the interfacial behavior of nanoparticles and of interest for water purification, drug encapsulation, enhanced oil recovery, and innovative energy transduction applications. Here, we present electrostatic interaction-driven fabrication of freestanding and close-packed SiO2 surfactant membranes with diameters up to 0.10 mm. The membranes of 20-30 nm in thickness were spanned over holes with a diameter of 2 μm, exhibiting a Young\'s modulus ranging from 1.5 to 5.9 GPa. The controllable elastic properties of the fabricated nanoparticle surfactant membranes are found to be dictated by the strength of interactions between nanoparticles and ligands, between ligands and ligands, and between the nanoparticle surfactants. The results present an efficient approach for fabricating and developing nanoparticle surfactant-based large-area, freestanding, and ultrathin membranes with finely tunable mechanical properties on a large scale.
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  • 文章类型: Journal Article
    一个新的鞘脂亚类的发现,(1-脱氧)鞘脂,缺少1-羟基,在过去的十年中引起了相当大的关注,主要是由于他们参与了疾病。它们的物理化学性质与经典(或1-羟基)鞘脂不同,并且在细胞中积累时毒性更大,诱导神经变性和其他功能障碍。(1-脱氧)神经酰胺,(1-脱氧)二氢神经酰胺,和(1-脱氧甲基)二氢神经酰胺,后两者含有饱和鞘氨醇链,在这项工作中已经使用差示扫描量热法进行了研究,共聚焦荧光和原子力显微镜,评估它们在由三种或四种脂质混合物组成的双层中的行为。与经典神经酰胺(Cer)相比,aC16:0(1-脱氧)Cer在C16:0鞘磷脂/胆固醇/XCer的混合物中显示出较低的混溶性,其中XCer是任何(1-脱氧)神经酰胺,导致液体有序相和凝胶相共存。后者类似,在热致行为和纳米机械阻力方面,C16:0鞘磷脂/胆固醇/C16:0Cer混合物的凝胶相[Busto等人。,生物群落。J.2014,106,621-630]。在纳米机械阻力方面,研究中的各种C16:0XCer之间存在差异,双层厚度和双层形貌。当在更流体的环境(基于C24:1SM的双层)中检查时,分离的凝胶相仍然存在。可能与这种横向分离有关,XCer保持膜渗透的能力,但它们的效果明显低于经典神经酰胺。此外,C24:1XCer显示出比它们的C16:0对应物显著更低的膜渗透能力。上述数据可能与某些鞘脂相关疾病的发病机制有关。包括某些神经病,糖尿病,和糖原贮积病。
    The discovery of a novel sphingolipid subclass, the (1-deoxy)sphingolipids, which lack the 1-hydroxy group, attracted considerable attention in the last decade, mainly due to their involvement in disease. They differed in their physico-chemical properties from the canonical (or 1-hydroxy) sphingolipids and they were more toxic when accumulated in cells, inducing neurodegeneration and other dysfunctions. (1-Deoxy)ceramides, (1-deoxy)dihydroceramides, and (1- deoxymethyl)dihydroceramides, the latter two containing a saturated sphingoid chain, have been studied in this work using differential scanning calorimetry, confocal fluorescence and atomic force microscopy, to evaluate their behavior in bilayers composed of mixtures of three or four lipids. When compared to canonical ceramides (Cer), a C16:0 (1-deoxy)Cer shows a lower miscibility in mixtures of the kind C16:0 sphingomyelin/cholesterol/XCer, where XCer is any (1-deoxy)ceramide, giving rise to the coexistence of a liquid-ordered phase and a gel phase. The latter resembles, in terms of thermotropic behavior and nanomechanical resistance, the gel phase of the C16:0 sphingomyelin/cholesterol/C16:0 Cer mixture [Busto et al., Biophys. J. 2014, 106, 621-630]. Differences are seen between the various C16:0 XCer under study in terms of nanomechanical resistance, bilayer thickness and bilayer topography. When examined in a more fluid environment (bilayers based on C24:1 SM), segregated gel phases are still present. Probably related to such lateral separation, XCer preserve the capacity for membrane permeation, but their effects are significantly lower than those of canonical ceramides. Moreover, C24:1 XCer show significantly lower membrane permeation capacity than their C16:0 counterparts. The above data may be relevant in the pathogenesis of certain sphingolipid-related diseases, including certain neuropathies, diabetes, and glycogen storage diseases.
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  • 文章类型: Journal Article
    电子设备的尺寸不断缩小,同时性能不断提高,使多余的散热具有挑战性。传统的热界面材料(TIM),如热脂和垫面临的限制,在导热性和稳定性,特别是当设备按比例缩小时。碳纳米管(CNT)由于其优异的导热性和机械性能而成为有希望的TIM候选物。然而,当CNT膜集成到器件中时,由于缺陷和捆扎效应,其热导率降低。本研究采用了一种新颖的横截面方法,将高真空扫描热显微镜(SThM)与光束出口横截面抛光(BEXP)相结合,以研究在低温和室温下垂直排列的CNT束的纳米级形态和热性能。使用适当的热传输模型,我们提取了垂直排列纳米管的有效热导率,并在200K下获得了4Wm-1K-1,在300K下获得了37Wm-1K-1。此外,CNT束之间不可忽视的横向热传导表明这些结构中更复杂的传热机制。这些发现为碳纳米管束中的纳米级热传输提供了独特的见解,这对于优化新的热管理策略至关重要。
    Electronic devices continue to shrink in size while increasing in performance, making excess heat dissipation challenging. Traditional thermal interface materials (TIMs) such as thermal grease and pads face limitations in thermal conductivity and stability, particularly as devices scale down. Carbon nanotubes (CNTs) have emerged as promising candidates for TIMs because of their exceptional thermal conductivity and mechanical properties. However, the thermal conductivity of CNT films decreases when integrated into devices due to defects and bundling effects. This study employs a novel cross-sectional approach combining high-vacuum scanning thermal microscopy (SThM) with beam-exit cross-sectional polishing (BEXP) to investigate the nanoscale morphology and thermal properties of vertically aligned CNT bundles at low and room temperatures. Using appropriate thermal transport models, we extracted effective thermal conductivities of the vertically aligned nanotubes and obtained 4 W m-1 K-1 at 200 K and 37 W m-1 K-1 at 300 K. Additionally, non-negligible lateral thermal conductance between CNT bundles suggests more complex heat transfer mechanisms in these structures. These findings provide unique insights into nanoscale thermal transport in CNT bundles, which is crucial for optimizing novel thermal management strategies.
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  • 文章类型: Journal Article
    真核染色体分离需要动子,在染色体着丝粒上组装并介导附着到动态纺锤体微管的多兆道尔顿蛋白质机器。Kinetochores是由许多复合体建造的,重组子组件的结构研究也取得了进展。然而,关于原生动体体系结构的结构信息有限。为了解决这个问题,我们纯化了功能,来自嗜热酵母马氏克鲁维酵母的天然动体,并通过电子显微镜(EM)对其进行了检查,低温电子断层显像(cryo-ET),和原子力显微镜(AFM)。动静脉非常大,具有与现有模型一致的特征的柔性组件。我们通过可视化它们与微管的相互作用并定位微管粘合剂来分配动粒极性,Ndc80c.这项工作表明,孤立的动车组比基于重组子组件的已知结构所预期的动态和复杂,并为在结构水平上研究动车组的整体结构和功能奠定了基础。
    Eukaryotic chromosome segregation requires kinetochores, multi-megadalton protein machines that assemble on the centromeres of chromosomes and mediate attachments to dynamic spindle microtubules. Kinetochores are built from numerous complexes, and there has been progress in structural studies on recombinant subassemblies. However, there is limited structural information on native kinetochore architecture. To address this, we purified functional, native kinetochores from the thermophilic yeast Kluyveromyces marxianus and examined them by electron microscopy (EM), cryoelectron tomography (cryo-ET), and atomic force microscopy (AFM). The kinetochores are extremely large, flexible assemblies that exhibit features consistent with prior models. We assigned kinetochore polarity by visualizing their interactions with microtubules and locating the microtubule binder, Ndc80c. This work shows that isolated kinetochores are more dynamic and complex than what might be anticipated based on the known structures of recombinant subassemblies and provides the foundation to study the global architecture and functions of kinetochores at a structural level.
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  • 文章类型: Journal Article
    纳米机械测试在评估包含纳米颗粒的表面中起着至关重要的作用。测试可验证有关其预期功能的表面性能,并检测操作标准中的任何潜在缺陷。认识到纳米结构化表面并不总是简单或均匀的是必要的。这些表面的化学组成和形态决定了终点功能。这可能需要使用彼此相反的材料的层状表面,这可能需要在纳米机械测试之后进一步修改以通过性能和质量标准。使用原子力显微镜(AFM)证明了由胶体金纳米粒子官能化的聚甲基恶唑啉膜基组成的结构化表面的纳米力学分析。AFM纳米力学测试调查了整个基底结构的地形,摩擦,附着力,和磨损参数。还讨论了其作为生物材料的潜在操作的局限性。这通过使用AFM悬臂施加各种力并破坏聚合物膜和金纳米颗粒之间的键来证明。AFM仪器提供了对低模量表面对高模量纳米粒子的行为的洞察。本文详细介绍了在施加外力时这些材料之间的结合和反应限制。对这种相互作用的应用进行了严格审查,以突出功能化表面的潜在局限性。这些发现强调了进行全面的纳米机械测试以解决与制造具有纳米结构的复杂生物材料表面相关的问题的重要性。
    Nanomechanical testing plays a crucial role in evaluating surfaces containing nanoparticles. Testing verifies surface performance concerning their intended function and detects any potential shortcomings in operational standards. Recognising that nanostructured surfaces are not always straightforward or uniform is essential. The chemical composition and morphology of these surfaces determine the end-point functionality. This can entail a layered surface using materials in contrast to each other that may require further modification after nanomechanical testing to pass performance and quality standards. Nanomechanical analysis of a structured surface consisting of a poly-methyl oxazoline film base functionalised with colloidal gold nanoparticles was demonstrated using an atomic force microscope (AFM). AFM nanomechanical testing investigated the overall substrate architecture\'s topographical, friction, adhesion, and wear parameters. Limitations towards its potential operation as a biomaterial were also addressed. This was demonstrated by using the AFM cantilever to apply various forces and break the bonds between the polymer film and gold nanoparticles. The AFM instrument offers an insight to the behaviour of low-modulus surface against a higher-modulus nanoparticle. This paper details the bonding and reaction limitations between these materials on the application of an externally applied force. The application of this interaction is highly scrutinised to highlight the potential limitations of a functionalised surface. These findings highlight the importance of conducting comprehensive nanomechanical testing to address concerns related to fabricating intricate biomaterial surfaces featuring nanostructures.
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  • 文章类型: Journal Article
    纤维状胶原蛋白分层组装成广泛而有序的超分子蛋白质原纤维对于细胞外基质功能和组织力学至关重要。尽管经过了几十年的研究,我们对纤维形成的复杂过程仍然知之甚少,特别是在观察快速形成的最早阶段,纳米级中间体挑战了大多数现有显微镜方法的空间和时间分辨率。使用视频速率扫描原子力显微镜(VRS-AFM),我们可以在溶液中的云母表面上观察到胶原蛋白原纤维形成和生长的最初几分钟的细节。纤维状胶原蛋白的定义特征是沿着原纤维的67nm周期性条带,这是由单个单体在多个长度尺度上的有序组装所驱动的。VRS-AFM视频显示了小原纤维从初始均匀高度到在几秒钟内显示典型条带的结构的同时生长和成熟。原纤维主要以单向方式生长,生长尖端的磨损末端锁住相邻的原纤维。我们发现,即使在极早的时间点,生长中的原纤维的重塑通过鸟笼中间体进行,并提出这些动力学可能提供成熟的分层组装途径。VRS-AFM提供了对在原纤维形成开始期间胶原的超分子组装的重塑的条带和途径的早期出现的独特一瞥。
    The hierarchic assembly of fibrillar collagen into an extensive and ordered supramolecular protein fibril is critical for extracellular matrix function and tissue mechanics. Despite decades of study, we still know very little about the complex process of fibrillogenesis, particularly at the earliest stages where observation of rapidly forming, nanoscale intermediates challenges the spatial and temporal resolution of most existing microscopy methods. Using video rate scanning atomic force microscopy (VRS-AFM), we can observe details of the first few minutes of collagen fibril formation and growth on a mica surface in solution. A defining feature of fibrillar collagens is a 67-nm periodic banding along the fibril driven by the organized assembly of individual monomers over multiple length scales. VRS-AFM videos show the concurrent growth and maturation of small fibrils from an initial uniform height to structures that display the canonical banding within seconds. Fibrils grow in a primarily unidirectional manner, with frayed ends of the growing tip latching onto adjacent fibrils. We find that, even at extremely early time points, remodeling of growing fibrils proceeds through bird-caging intermediates and propose that these dynamics may provide a pathway to mature hierarchic assembly. VRS-AFM provides a unique glimpse into the early emergence of banding and pathways for remodeling of the supramolecular assembly of collagen during the inception of fibrillogenesis.
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  • 文章类型: Journal Article
    最近,我们开发了一种使用扫描电子显微镜(SEM)图像定量评估球形微粒粗糙度的算法。该算法通过分析颗粒的边界来计算单个颗粒的均方根轮廓粗糙度(RMS-RQ)。然而,从单个SEM图像提取的信息仅产生来自颗粒的水平面的二维(2D)轮廓粗糙度数据。本研究提供了一种实用的程序和必要的软件工具,可通过倾斜样品(阶段)从记录在不同颗粒倾斜度的2D颗粒轮廓中获得准三维(3D)信息。这种新方法在一组聚苯乙烯核-氧化铁壳-二氧化硅壳颗粒上进行了测试,这些颗粒具有不同的(定制的)表面粗糙度,提供了验证所提出方法适用性的原理证明。通过最新版本的开发算法分析了这些颗粒的SEM图像,这允许作为常规质量控制程序来确定批次内和批次内的颗粒粗糙度分析。通过原子力显微镜(AFM)分析了一组单独的颗粒,作为集成到SEM中的强大的互补表面分析技术,并对粗糙度结果进行了比较。
    Recently, we have developed an algorithm to quantitatively evaluate the roughness of spherical microparticles using scanning electron microscopy (SEM) images. The algorithm calculates the root-mean-squared profile roughness (RMS-RQ) of a single particle by analyzing the particle\'s boundary. The information extracted from a single SEM image yields however only two-dimensional (2D) profile roughness data from the horizontal plane of a particle. The present study offers a practical procedure and the necessary software tools to gain quasi three-dimensional (3D) information from 2D particle contours recorded at different particle inclinations by tilting the sample (stage). This new approach was tested on a set of polystyrene core-iron oxide shell-silica shell particles as few micrometer-sized beads with different (tailored) surface roughness, providing the proof of principle that validates the applicability of the proposed method. SEM images of these particles were analyzed by the latest version of the developed algorithm, which allows to determine the analysis of particles in terms of roughness both within a batch and across the batches as a routine quality control procedure. A separate set of particles has been analyzed by atomic force microscopy (AFM) as a powerful complementary surface analysis technique integrated into SEM, and the roughness results have been compared.
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