Arcanobacterium

  • 文章类型: Journal Article
    皮肤溃疡在偏航流行地区很常见。尽管通常归因于梅毒螺旋体亚种。Pertenue\'和杜克雷嗜血杆菌,定量PCR强调了这些溃疡的很大一部分对两种病原体均为阴性,并且被认为是特发性的。这是一项回顾性分析,利用加纳和所罗门群岛进行的两项独立的yaws研究的现有16SrRNA测序数据。我们对38个样本中的细菌多样性进行了表征,以鉴定特发性皮肤溃疡的潜在病原体。我们发现了不同的细菌特征,包括溶血性弧菌,弯曲杆菌,白喉棒杆菌,葡萄球菌属。和化脓性链球菌,与以前皮肤溃疡微生物组研究的结果一致。在所有样品中没有普遍存在单一细菌物种。最普遍的细菌,溶脲弯曲杆菌,出现在42%的样本中,提示雅典病流行地区皮肤溃疡的多因素病因。这项研究强调需要对潜在的致病因素进行细致的了解。这些发现促使进一步探索导致特发性偏航样溃疡的复杂微生物相互作用,指导未来研究走向全面的诊断和治疗策略。
    Cutaneous ulcers are common in yaws-endemic areas. Although often attributed to \'Treponema pallidum subsp. pertenue\' and Haemophilus ducreyi, quantitative PCR has highlighted a significant proportion of these ulcers are negative for both pathogens and are considered idiopathic. This is a retrospective analysis utilising existing 16S rRNA sequencing data from two independent yaws studies that took place in Ghana and the Solomon Islands. We characterized bacterial diversity in 38 samples to identify potential causative agents for idiopathic cutaneous ulcers. We identified a diverse bacterial profile, including Arcanobacterium haemolyticum, Campylobacter concisus, Corynebacterium diphtheriae, Staphylococcus spp. and Streptococcus pyogenes, consistent with findings from previous cutaneous ulcer microbiome studies. No single bacterial species was universally present across all samples. The most prevalent bacterium, Campylobacter ureolyticus, appeared in 42% of samples, suggesting a multifactorial aetiology for cutaneous ulcers in yaws-endemic areas. This study emphasizes the need for a nuanced understanding of potential causative agents. The findings prompt further exploration into the intricate microbial interactions contributing to idiopathic yaw-like ulcers, guiding future research toward comprehensive diagnostic and therapeutic strategies.
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  • 文章类型: Review
    背景:化脓性Trueperella(T.化脓性)是一种细菌,定植于各种家畜和野生动物的皮肤和粘膜表面。它很少导致人类感染,文献中只有很少的描述。
    方法:一位71岁的瑞士农民,有复发的基底细胞癌和转移的胰腺神经内分泌肿瘤的病史,经过三天的全身无力的病史后出现脓毒症的迹象,不适和发烧。临床和超声心动图检查结果,以及持续性菌血症与化脓性T.pyogenes引起的二尖瓣心内膜炎一致。经哌拉西林/他唑巴坦(脓毒症经验性治疗)抗生素治疗后,患者病情逐渐好转,以及后来基于耐药性测试的青霉素G。13天后出院,继续门诊抗生素治疗头孢曲松,导致抗生素治疗总持续时间为六周。这是人类化脓性T.心内膜炎的第一篇文献综述。在9例化脓性弧菌心内膜炎中,3例患者曾与农场动物有过接触,5例患者有免疫系统受损的潜在疾病.虽然化脓杆菌的抗生素耐药性是一个新兴的问题,对β-内酰胺类抗生素的易感性似乎持续存在.文献中描述的化脓性弧菌心内膜炎的死亡率很高,66%的患者无法存活。
    结论:T.化脓性是人类感染性心内膜炎的罕见病原体,描述主要限于病例报告。在我们的文献综述中,我们发现,免疫系统受损和与农场动物接触都可能是危险因素。在常规分析中,血液培养物中化脓性产脓毒菌的生长不太可能被遗漏,因为它在血琼脂培养板上显示出明显的β-溶血,这通常导致细菌的进一步表征。对青霉素的易感性,头孢曲松,大环内酯类药物似乎被保留,少数化脓性弧菌心内膜炎患者的死亡率很高。
    BACKGROUND: Trueperella pyogenes (T. pyogenes) is a bacterium that colonizes the skin and mucosal surfaces of various domestic and wild animals. It rarely leads to infections in humans, with only a few descriptions available in the literature.
    METHODS: A 71-year-old Swiss farmer with a history of recurring basal cell carcinoma and metastasized pancreatic neuroendocrine tumor presented with signs of sepsis after a three-day history of general weakness, malaise and fever. Clinical and echocardiographic findings, as well as persistent bacteremia were consistent with mitral valve endocarditis caused by T. pyogenes. The patient\'s condition gradually improved under antibiotic treatment with piperacillin/tazobactam (empiric therapy of sepsis), and later penicillin G based on resistance testing. He was discharged after 13 days and continued outpatient antibiotic therapy with ceftriaxone, resulting in a total antibiotic treatment duration of six weeks. This is the first literature review of T. pyogenes endocarditis in humans. Among nine cases of T. pyogenes endocarditis, three patients had documented contact with farm animals and five had an underlying condition that compromised the immune system. While antibiotic resistance of T. pyogenes is an emerging concern, susceptibility to beta-lactam antibiotics seems to persist. The mortality of T. pyogenes endocarditis described in the literature was high, with 66% of patients not surviving the disease.
    CONCLUSIONS: T. pyogenes is a rare causative organism of infectious endocarditis in humans and descriptions are mainly restricted to case reports. In our review of the literature, we found that both an impaired immune system and contact with farm animals might be risk factors. Growth of T. pyogenes in blood cultures is unlikely to be missed during routine analysis, as it shows marked beta-hemolysis on blood agar culture plates, which generally leads to further characterization of the bacteria. Susceptibility to penicillin, ceftriaxone, and macrolides seems to be retained and the reported mortality in the few patients with T. pyogenes endocarditis is high.
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  • 文章类型: Journal Article
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  • 文章类型: Journal Article
    对从死去的雄性海豹的肛门拭子中分离出的未鉴定的先前描述的Arcanobacterium样革兰氏阳性菌株2701T进行了多相分类学研究。比较16SrRNA测序表明,该细菌属于弧菌科中的弧菌属。该菌株的基因组序列由Borowiak等人获得。[1].基因组具有49mol%的G+C含量和1.94Mb的总长度。主要的甲萘醌MK-9(H4)的存在支持了该分离株与弧菌属的隶属关系。极性脂质分布由二磷脂酰甘油和一种未知的磷脂作为主要成分和两种未知的脂质组成,另一种身份不明的磷脂,两种未知的磷酸糖脂以及磷脂酰甘油。主要脂肪酸为C16:0、C18:1和C18:0。生化和系统发育分析清楚地将分离物与弧菌属的其他成员和密切相关的其他物种区分开。基于这些结果,建议未知的弧菌。菌株2701T应归类为代表新物种,名称为Arcanobacteriumbuesumensesp。11月。菌株类型为2701T(=DSM112952T=LMG32446T)。
    A polyphasic taxonomic study was performed on an unidentified previously described Arcanobacterium-like Gram-positive strain 2701T isolated from an anal swab of a dead male harbour seal. Comparative 16S rRNA sequencing showed that the bacterium belonged to the genus Arcanobacterium in the family Arcanobacteriaceae. The genome sequence of the strain was obtained by Borowiak et al. [1]. The genome had a G+C content of 49 mol% and a total length of 1.94 Mb. The presence of the major menaquinone MK-9(H4) supported the affiliation of the isolate with the genus Arcanobacterium. The polar lipid profile consisted of diphosphatidylglycerol and an unidentified phospholipid as major components and two unidentified lipids, a further unidentified phospholipid, two unidentified phosphoglycolipids as well as phosphatidylglycerol. The major fatty acids were C16 : 0, C18 : 1 and C18 : 0. Biochemical and phylogenetic analyses clearly distinguished the isolate from other members of the genus Arcanobacterium and closely related other species. Based on these results, it is proposed that the unknown Arcanobacterium sp. strain 2701T should be classified as representing a novel species with the name Arcanobacterium buesumense sp. nov. The type strain is 2701T (=DSM 112952T=LMG 32446T).
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  • 文章类型: Journal Article
    Trueperella(T.)由Azuma及其同事于2009年在日本提出了堕胎。在目前的研究中,通过基于甘油醛3-磷酸脱氢酶(GAPDH)编码基因缺口的新开发的环介导等温扩增(LAMP)测定,鉴定了8株流产螺旋藻菌株。在英国,从7个月大的公猪的包皮包皮和合并的胎儿胃内容物中获得了两种流产螺旋杆菌菌株,而其他6种流产T.abortisuis菌株是从德国一个农场的6头猪的流产胎儿材料中回收的。开发的LAMP测定显示22pgμL-1T的分析灵敏度。流产的DNA.流产T.DSM19515T和田间菌株流产T.P504054/19/1在人工污染的阴道拭子中可直接检测到,每个拭子浓度为980CFU和770CFU,分别。与代表Trueperella属的6种和密切相关的Arcanobacterium属和Schaalia(放线菌)hyovinalis属的6种对照菌株没有交叉反应性。需要进一步的现场研究来确定设计的LAMP测定法用于鉴定从各种来源的猪和直接在农场水平获得的测试样品中分离的流产丝菌的有用性。
    The first description of Trueperella (T.) abortisuis was presented in Japan in 2009 by Azuma and colleagues. In the current study, eight T. abortisuis strains were identified by a newly developed loop-mediated isothermal amplification (LAMP) assay based on the glyceraldehyde 3-phosphate dehydrogenase (GAPDH) encoding gene gap. Two T. abortisuis strains were obtained from prepuce of a seven-month-old boar and pooled foetal stomach contents in the United Kingdom, while the other six T. abortisuis strains were recovered from aborted foetal material of six pigs from a single farm in Germany. The developed LAMP assay showed an analytical sensitivity of 22 pg μL-1T. abortisuis DNA. T. abortisuis DSM 19515T and field strain T. abortisuis P504054/19/1 were directly detectable in artificially contaminated vaginal swabs up to concentrations of 980 CFU and 770 CFU per swab, respectively. There was no cross reactivity with control strains representing six species of genus Trueperella and six species of the closely related genus Arcanobacterium and Schaalia (Actinomyces) hyovaginalis. Further field research is required to determine the usefulness of the designed LAMP assay for identifying T. abortisuis isolated from pigs of various origins and from test samples directly obtained at farm level.
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  • 文章类型: Journal Article
    背景:溶血弧菌可引起儿童和年轻人的咽扁桃体炎。它很少在咽拭子中分离,因为测试它不是常规的。有关并发症的数据,管理,和抗生素敏感性测试是有限的。我们试图回顾有关该年龄段的溶血性咽炎的表现和治疗的现有文献。
    方法:对有资格的研究进行了系统评价,这些研究报告了儿童和年轻人由溶血性弧菌引起的咽炎和相关并发症。来自病例报告的文献,案例系列,并编制了可用的队列。数据采用描述性统计分析。
    结果:最初的数据库搜索产生了63篇文章,在应用排除标准后,纳入了17项研究.191名患者的中位年龄为16.5岁。最常见的表现是在93.7%的患者中报告的咽喉疼痛。扁桃体分泌物,超过一半的病例在就诊时出现发热和皮疹。诊断是通过收集的98.8%的拭子在咽拭子上的阳性培养物确定的。所描述的并发症包括扁桃体周围脓肿,Lemierre综合征,肺炎,还有败血症.81%的患者使用青霉素作为一线抗生素,19例患者使用大环内酯类药物(18%)。
    结论:A.溶血病发生在儿童和年轻人中,并可能导致并发症。我们的评论支持其对青霉素的易感性。我们建议一种诊断和管理算法,以指导临床医生进行有针对性的测试,并帮助做出有关及时和适当的抗生素治疗的决策。以减轻其并发症的负担。
    BACKGROUND: Arcanobacterium haemolyticum causes pharyngotonsillitis in children and young adults. It is rarely isolated in pharyngeal swabs as testing for it is not routine. Data on complications, management, and antibiotic susceptibility testing is limited. We sought to review the available literature on the presentation and management of A. haemolyticum pharyngotonsillitis in this age group.
    METHODS: A systematic review of eligible studies reporting pharyngotonsillitis and related complications in children and young adults caused by A. haemolyticum was conducted. Literature from case reports, case series, and available cohorts was compiled. Data were analyzed using descriptive statistics.
    RESULTS: The initial database search yielded 63 articles, after applying exclusion criteria 17 studies were included. 191 patients were identified with a median age of 16.5 years. The most common presentation was throat pain reported in 93.7% of patients. Tonsillar exudates, fever at presentation and rash were present in more than half of the reviewed cases. The diagnosis was established by a positive culture on a pharyngeal swab in 98.8% of swabs collected. Complications described included peritonsillar abscesses, Lemierre\'s syndrome, pneumonia, and sepsis. Penicillin was the first line antibiotic in 81% of patients followed by macrolides in 19 patients (18%).
    CONCLUSIONS: A. haemolyticum occurs in children and young adults and may result in complications. Our review supports its susceptibility to penicillin. We suggest a diagnostic and management algorithm to guide clinicians in targeted testing and aid with decision making regarding timely and appropriate antibiotic therapy, in an effort to reduce the burden of its complications.
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  • 文章类型: Case Reports
    We report the case of a 90-year-old female who was admitted to our hospital due to a three-day history of right abdominal pain and fever of 39 °C (102 °F). The patient\'s blood pressure was low, with good blood perfusion and no jaundice, and her abdomen was soft and tender in the right hypochondriac and lateral region, with no guarding. Laboratory tests showed: blood glucose level of 201 mg/dl, 362 U/l AST, 237 U/l ALT, 2.5 mg/dl bilirubin, 237 U/l alkaline phosphatase and leukocytosis associated with a left shift. An abdominal ultrasound scan showed a collection of echogenic material and a shadow suggestive of air in hepatic segment 3. Meropenem and metronidazole treatment was started after taking blood cultures, which were negative. A computed tomography (CT) scan confirmed the presence of a liver abscess in segment 3, containing a high-density linear image.
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  • 文章类型: Journal Article
    A polyphasic taxonomic study was performed on an unidentified Arcanobacterium-like Gram-stain-positive bacterium designated strain C605018/01/1T isolated from a milk sample collected from the udder of a cow at post mortem. Comparative 16S rRNA gene sequencing showed that the bacterium belonged to the genus Arcanobacterium and was most closely related to the type strain of Arcanobacterium pluranimalium (99.76 %); sequence similarities to all other Arcanobacterium species were below 97 %. The wet-lab DNA-DNA hybridization values among strain C605018/01/1T and A. pluranimalium DSM 13483ᵀ were low, 16.9 % (reciprocal, 49.8 %). Pertaining to the whole genome sequence with a total length of 2.02 Mb and 1654 protein counts, the novel strain C605018/01/01T displayed a G+C content of 51.6 % mol%. The presence of the major menaquinone MK-9(H4) supported the affiliation of this strain to the genus Arcanobacterium. The polar lipid profile consisted of the major components diphosphatidylglycerol, phosphatidylcholine, phosphatidylinositol, phosphatidylinositol-mannoside and unidentified glycolipid and aminophospholipids. Based on these results it is proposed that strain C605018/01/1T should be classified as representing a novel species, Arcanbacterium bovis sp. nov. The type strain C605018/01/1T (CCUG 45425T=DSM 107286T=BCCM/LMG 30783T).
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  • 文章类型: Journal Article
    BACKGROUND: Aging and comorbidities such as diabetes and vascular problems contribute to the increasing occurrence of chronic wounds. From the beginning of 2016, a marked increase in Arcanobacterium haemolyticum (ARH) in chronic wound cultures was noted among patients visiting a wound expertise centre in The Netherlands.
    OBJECTIVE: To report the outbreak investigation of ARH cultured from chronic wounds and describe the implemented infection prevention measures.
    METHODS: In total, 50 ARH isolates were sent to a reference laboratory for molecular typing. Samples for bacterial culture and ARH polymerase chain reaction were taken from care workers, the environment and items used for wound care. Infection prevention measures were implemented in a bundled approach, involving education, better aseptic wound care conditions and hygienic precautions. Before and after the implementation of infection prevention measures, two screening rounds of ARH testing were performed among all patients receiving home care.
    RESULTS: ARH isolates from wound care patients were found to be identical by core genome multi-locus sequence typing. No definite outbreak source could be determined by culture. However, three pairs of forceps, used by two nurses on multiple patients, were found to be ARH positive by polymerase chain reaction. In the two screening rounds before and after the implementation of infection prevention measures, the proportion of ARH-positive patients decreased significantly from 20% (20/99) to 3% (3/104). Subsequently, no new cases occurred.
    CONCLUSIONS: This first ARH outbreak was likely caused by re-using contaminated instruments. Through the implementation of improved infection prevention measures and re-education of all employees involved, the outbreak was controlled. With the current trend of care transition, infection control must be a major concern.
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  • 文章类型: Journal Article
    The present study was designed to identify nine Arcanobacterium phocae strains isolated from cases of mink dermatitis of a single farm in Finland and characterize the strains for epidemiological relationships. All nine strains and previously described A. phocae used for comparative purposes were identified and further characterized phenotypically, by matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS), by Fourier Transform Infrared Spectroscopy (FT-IR) and genotypically by detection of phocaelysin encoding gene phl with a previously developed loop-mediated isothermal amplification (LAMP) assay and by sequencing 16S rRNA gene and gene phl, the elongation factor tu encoding gene tuf and the β subunit of bacterial RNA polymerase encoding gene rpoB. Genetic relatedness among isolates was determined using whole-genome single nucleotide polymorphism (wgSNP) analysis. The wgSNP results, partly the MALDI-TOF MS and FT-IR analyses and sequencing of the genes, revealed that the nine A. phocae strains recovered from a single farm showed close sequence similarities among each other and differed from previously investigated A. phocae strains isolated from other farms and animals in Finland and from the A. phocae type strain. This indicated a close epidemiological relationship of the A. phocae strains isolated from a single farm and that the nine A. phocae strains of the present study might have developed from a common ancestor.
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