Antibacterial mechanism

抗菌机制
  • 文章类型: Journal Article
    近年来,如何提高食品包装材料的功能性能日益受到重视。一种常见的无机材料,纳米氧化锌(ZnO-NPs),由于其优异的抗菌性能和敏感性,已经引起了极大的关注。因此,ZnO-NP基功能包装材料在食品工业中发展迅速。然而,目前对ZnO-NPs作为功能性填料在食品包装中的应用缺乏全面系统的综述。在这次审查中,介绍了ZnO-NPs的特性和抗菌机理,并关注了影响ZnO-NPs抗菌活性的因素。此外,系统分析了含ZnO-NPs的智能包装和抗菌包装在食品工业中的应用。同时,本文还深入研究了ZnO-NPs对各种性能的影响,包括厚度,防潮性,水蒸气屏障,机械性能,光学性质,食品包装材料的热性能和微观结构。最后,讨论了ZnO-NPs在包装材料中的迁移和安全性。ZnO-NP是安全的,迁移率可以忽略不计,同时,它们的敏感性和抗菌性能可用于检测食品在储存过程中的质量变化并延长其保质期。
    In recent years, how to improve the functional performance of food packaging materials has received increasing attention. One common inorganic material, nanometer zinc oxide (ZnO-NPs), has garnered significant attention due to its excellent antibacterial properties and sensitivity. Consequently, ZnO-NP-based functional packaging materials are rapidly developing in the food industry. However, there is currently a lack of comprehensive and systematic reviews on the use of ZnO-NPs as functional fillers in food packaging. In this review, we introduced the characteristics and antibacterial mechanism of ZnO-NPs, and paid attention to the factors affecting the antibacterial activity of ZnO-NPs. Furthermore, we systematically analyzed the application of intelligent packaging and antibacterial packaging containing ZnO-NPs in the food industry. At the same time, this paper also thoroughly investigated the impact of ZnO-NPs on various properties including thickness, moisture resistance, water vapor barrier, mechanical properties, optical properties, thermal properties and microstructure of food packaging materials. Finally, we discussed the migration and safety of ZnO-NPs in packaging materials. ZnO-NPs are safe and have negligible migration rates, simultaneously their sensitivity and antibacterial properties can be used to detect the quality changes of food during storage and extend its shelf life.
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  • 文章类型: Journal Article
    该研究旨在从山西老陈醋微生物组中挖掘和表征新型抗菌肽(AMPs)。利用机器学习技术,AlphaFold2结构预测和分子动力学模拟,基于宏基因组数据,从98,539个肽中创新性地开采了6个新的AMP,其中一种由乳杆菌分泌的肽(名为La-AMP)经实验验证对金黄色葡萄球菌具有显着的杀菌作用(S.金黄色葡萄球菌)和大肠杆菌(E.coli)稳定性高,无溶血活性。扫描电镜显示La-AMP对金黄色葡萄球菌和大肠杆菌的细胞膜造成不可逆的损伤,钙黄绿素-AM/碘化丙啶染色进一步证实了这一发现。此外,La-AMP诱导细菌细胞中的核酸泄漏和活性氧积累。发现它通过盐桥与DNA促旋酶结合,氢键,和疏水相互作用,最终诱导细胞凋亡。因此,La-AMP作为开发天然防腐剂的有价值的生物活性成分表现出令人鼓舞的前景。
    The study aimed to mine and characterize novel antimicrobial peptides (AMPs) from the Shanxi aged vinegar microbiome. Utilizing machine learning techniques, AlphaFold2 structure prediction and molecular dynamics simulations, six novel AMPs were innovatively mined from 98,539 peptides based on metagenomic data, of which one peptide secreted by Lactobacillus (named La-AMP) was experimentally validated to have remarkable bactericidal effects against Staphylococcus aureus (S. aureus) and Escherichia coli (E. coli) with high stability and no hemolytic activity. Scanning electron microscopy revealed that La-AMP caused irreversible damage to cell membranes of S. aureus and E. coli, a finding further confirmed by calcein-AM/propidium iodide staining. Additionally, La-AMP induced nucleic acid leakage and reactive oxygen species accumulation in bacterial cells. It was found to bind to DNA gyrase through salt bridges, hydrogen bonds, and hydrophobic interactions, ultimately inducing apoptosis. Thus, La-AMP exhibited encouraging promise as a valuable bioactive component for the development of natural preservatives.
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  • 文章类型: Journal Article
    双甲无菌科(Ehrh。)W.库尔布。是一种在中国具有食用和药用用途的地衣。我们先前的研究表明,流形Thamnoliasuguleformis(METS)的甲醇提取物对食源性病原体具有广泛的抗菌活性和稳定性。本研究利用非靶向代谢组学研究METS对金黄色葡萄球菌的抗菌机制,关注细胞壁和细胞膜损伤。结果表明,METS的最小抑菌浓度(MIC)为0.625mg·mL-1,在该浓度下METS具有良好的生物安全性。METS对细胞壁和膜完整性造成了重大损害,基于电子显微镜的形态学观察和碱性磷酸酶的渗漏,蛋白质,和细胞培养物中的核酸。用MIC的METS处理破坏了金黄色葡萄球菌的脂质代谢,导致细胞膜中各种磷脂和鞘脂的代谢减少,饱和脂肪酸与不饱和脂肪酸的比例增加。此外,它影响细胞内氨基酸和能量代谢。这些结果阐明了METS对金黄色葡萄球菌的抗菌机制,同时也为进一步开发衍生自沙门菌的天然抗菌化合物提供了参考。
    Thamnolia subuliformis (Ehrh.) W. Culb is a species of lichen with edible and medicinal applications in China. Our previous studies demonstrated that the methanol extract of Thamnolia subuliformis (METS) exhibits broad antibacterial activity and stability against foodborne pathogens. This study aimed to investigate the antibacterial mechanism of METS against Staphylococcus aureus using nontargeted metabolomics, focusing on cell wall and membrane damage. The results revealed that the minimum inhibitory concentration (MIC) was 0.625 mg ml-1 and that METS had good biosafety at this concentration. METS caused significant damage to the cell wall and membrane integrity, based on both morphological observation by electron microscopy and the leakage of alkaline phosphatase, protein, and nucleic acid in the cell cultures. Treatment with METS at the MIC disrupted the lipid metabolism of S. aureus, causing a decrease in the metabolism of various phospholipids and sphingolipids in the cell membrane and an increase in the ratio of saturated fatty acids to unsaturated fatty acids. Moreover, it influenced intracellular amino acid and energy metabolism. These results shed light on the antibacterial mechanism of METS against S. aureus while also serving as a reference for the further development of natural antibacterial compounds derived from Thamnolia subuliformis.
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  • 文章类型: Journal Article
    嗜水气单胞菌是大口鲈鱼中最常见的致病菌之一。使用抗生素抑制嗜水气单胞菌对鱼类和环境安全构成重大威胁。velezensis,一种具有益生菌和抗菌特性的安全细菌,是拮抗嗜水气单胞菌的理想候选者。本研究探讨了VelezensisFLU-1在体内和体外对嗜水气单胞菌的拮抗作用。此外,我们探索了菌株FLU-1产生的抗菌肽(AMP),并阐明了潜在的抗菌机制。结果表明,菌株FLU-1能抑制多种鱼类病原菌,包括嗜水虫。攻毒试验表明,饲粮中添加维氏芽孢杆菌FLU-1显著提高了大嘴鲈鱼的存活率,降低了肝脏中的细菌负荷。随后,该AMP-LCI分离自维氏芽孢杆菌FLU-1,并且发现其在体外和体内对嗜水气单胞菌有效。转录组学分析显示,LCI下调了与嗜水曲霉鞭毛组装和肽聚糖合成相关的基因。表型检测结果表明,LCI破坏了膜的完整性,显著降低了生物膜生物量并降低了嗜水菌的游泳运动。此外,结果表明,LCI与嗜水曲霉的基因组DNA结合并破坏了DNA结构。总的来说,这些发现阐明了LCI在表型和生理水平上对嗜水气单胞菌的作用机制。这项研究表明,维氏芽孢杆菌FLU-1及其AMPLCI可以作为控制水产养殖病原体的抗生素替代品。
    Aeromonas hydrophila is one of the most prevalent pathogenic bacteria in largemouth bass. The use of antibiotics to inhibit A. hydrophila poses a significant threat to fish and environmental safety. Bacillus velezensis, a safe bacterium with probiotic and antibacterial characteristics, is an ideal candidate for antagonizing A. hydrophila. This study explored the antagonistic effects of B. velezensis FLU-1 on A. hydrophila in vivo and in vitro. In addition, we explored the antimicrobial peptides (AMPs) produced by strain FLU-1 and clarified the underlying antibacterial mechanisms. The results showed that strain FLU-1 could inhibit a variety of fish pathogens, including A. hydrophila. The challenge test showed that dietary supplementation with B. velezensis FLU-1 significantly improved the survival rate of largemouth bass and reduced the bacterial load in liver. Subsequently, the AMP LCI was isolated from B. velezensis FLU-1 and was found to be effective against A. hydrophila in vitro and in vivo. Transcriptomic analysis revealed that LCI downregulated the genes associated with flagellar assembly and peptidoglycan synthesis in A. hydrophila. Phenotypic test results showed that LCI disrupted the membrane integrity, markedly reduced the biofilm biomass and diminished the swimming motility of A. hydrophila. Furthermore, the results showed that LCI bound to the genomic DNA of A. hydrophila and destroyed the DNA structures. Overall, these findings elucidated the mechanism of action of LCI against A. hydrophila at the phenotypic and physiological levels. This study suggests that B. velezensis FLU-1 and its AMP LCI could serve as antibiotic alternatives for controlling pathogens in aquaculture.
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  • 文章类型: Journal Article
    直接势垒放电(DBD)等离子体是控制尖孢镰刀菌(F.尖孢)在食品工业中。本研究旨在探讨DBD血浆对尖孢酵母的抑制作用及其作用机制。抑菌效果曲线的结果表明,DBD血浆对尖孢酵母具有良好的灭活效果。DBD等离子体处理严重破坏了细胞膜结构,并导致细胞内成分的泄漏。此外,流式细胞术观察细胞内活性氧(ROS)水平和线粒体膜电位,人们发现,等离子体处理后,细胞内ROS积累和线粒体损伤伴随着抗氧化酶活性的降低。游离脂肪酸代谢结果表明,饱和脂肪酸含量增加,不饱和脂肪酸含量降低。总的来说,DBD等离子体处理导致不饱和脂肪酸的氧化,改变细胞膜脂肪酸含量,从而诱导细胞膜损伤。同时,DBD血浆诱导的ROS穿透细胞膜并在细胞内积累,导致抗氧化系统崩溃,最终导致细胞死亡。本研究揭示了DBD处理对尖孢的杀菌作用及机理,这为尖孢酵母的控制提供了可能的策略。
    Direct barrier discharge (DBD) plasma is a potential antibacterial strategy for controlling Fusarium oxysporum (F. oxysporum) in the food industry. The aim of this study was to investigate the inhibitory effect and mechanism of action of DBD plasma on F. oxysporum. The result of the antibacterial effect curve shows that DBD plasma has a good inactivation effect on F. oxysporum. The DBD plasma treatment severely disrupted the cell membrane structure and resulted in the leakage of intracellular components. In addition, flow cytometry was used to observe intracellular reactive oxygen species (ROS) levels and mitochondrial membrane potential, and it was found that, after plasma treatment, intracellular ROS accumulation and mitochondrial damage were accompanied by a decrease in antioxidant enzyme activity. The results of free fatty acid metabolism indicate that the saturated fatty acid content increased and unsaturated fatty acid content decreased. Overall, the DBD plasma treatment led to the oxidation of unsaturated fatty acids, which altered the cell membrane fatty acid content, thereby inducing cell membrane damage. Meanwhile, DBD plasma-induced ROS penetrated the cell membrane and accumulated intracellularly, leading to the collapse of the antioxidant system and ultimately causing cell death. This study reveals the bactericidal effect and mechanism of the DBD treatment on F. oxysporum, which provides a possible strategy for the control of F. oxysporum.
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  • 文章类型: Journal Article
    在这项研究中,植物乳杆菌SCB2505(MLpSCB2505)的代谢产物对布鲁氏假单胞菌的抗菌机制(P。lundenis)SCB2605进行了调查,以及它们对干龄牛肉的防腐效果的评估。结果表明,MLpSCB2505对P.lundensis的生长和生物膜合成具有有效的抑制作用。用MLpSCB2505处理导致膜完整性受损,细胞内ATP含量降低证明了这一点,细胞外AKPase增加,K+和蛋白质含量,以及破坏的细胞形态。进一步的代谢组学分析显示MLpSCB2505干扰了氨基酸代谢,核苷酸代谢,辅因子和维生素代谢,Lundenis的脂质代谢和呼吸链,最终导致细菌生命活动中断甚至死亡。此外,MLpSCB2505能有效抑制干龄牛肉中假单胞菌的生长,延缓变质。这些发现提出了MLpSCB2505作为抗菌剂在肉制品中的潜在应用。
    In this study, the antibacterial mechanism of metabolites of Lactobacillus plantarum SCB2505 (MLp SCB2505) against Pseudomonas lundensis (P. lundensis) SCB2605 was investigated, along with evaluation of their preservative effects on dry-aged beef. The results demonstrated the effective inhibition of MLp SCB2505 on the growth and biofilm synthesis of P. lundensis. The treatment with MLp SCB2505 led to the compromised membrane integrity, as evidenced by reduced intracellular ATP content, increased extracellular AKPase, K+ and protein content, as well as disrupted cell morphology. Further metabolomics analysis revealed that MLp SCB2505 interfered amino acid metabolism, nucleotide metabolism, cofactor and vitamin metabolism, lipid metabolism and respiratory chain in P. lundensis, ultimately leading to the interrupted life activities and even death of the bacteria. Besides, MLp SCB2505 could effectively inhibit the growth of Pseudomonas in dry-aged beef and delay spoilage. These findings propose the potential application of MLp SCB2505 as an antibacterial agent in meat products.
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  • 文章类型: Journal Article
    本研究论文利用融合的计算机方法以及生物活性评估来鉴定用于药物发现的活性FtsZ抑制剂。最初,采用ROC引导的机器学习从三个库中获得近13182种化合物。在进行虚拟筛选以评估2621种获得的化合物的亲和力后,聚类分析和键合模型分析导致发现了5种命中化合物。此外,抗菌活性测定和时间杀伤动力学表明,T3995可以消除金黄色葡萄球菌ATCC6538和枯草芽孢杆菌ATCC9732,MIC值为32和2μg/mL。进一步的形态学和FtsZ聚合试验表明,T3995可以通过靶向FtsZ蛋白而成为抗微生物抑制剂。此外,溶血毒性评估表明,T3995在16ug/mL浓度或以下是安全的。此外,键合模型分析解释了化合物T3995如何通过靶向FtsZ蛋白来显示抗菌活性。总之,这项研究提出了一种有前途的FtsZ抑制剂,该抑制剂是通过融合计算机方法和生物活性评估发现的。
    This research paper utilizes a fused-in-silico approach alongside bioactivity evaluation to identify active FtsZ inhibitors for drug discovery. Initially, ROC-guided machine learning was employed to obtain almost 13182 compounds from three libraries. After conducting virtual screening to assess the affinity of 2621 acquired compounds, cluster analysis and bonding model analysis led to the discovery of five hit compounds. Additionally, antibacterial activity assays and time-killing kinetics revealed that T3995 could eliminate Staphylococcus aureus ATCC6538 and Bacillus subtilis ATCC9732, with MIC values of 32 and 2 μg/mL. Further morphology and FtsZ polymerization assays indicated that T3995 could be an antimicrobial inhibitor by targeting FtsZ protein. Moreover, hemolytic toxicity evaluation demonstrated that T3995 is safe at or below 16 ug/mL concentration. Additionally, bonding model analysis explained how the compound T3995 can display antimicrobial activity by targeting the FtsZ protein. In conclusion, this study presents a promising FtsZ inhibitor that was discovered through a fused computer method and bioactivity evaluation.
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  • 文章类型: Journal Article
    最近,氯过氧化物酶(CPO)介导的酶动态疗法(EDT)通过产生高活性印戒氧(1O2)来模拟中性粒细胞的抗病原体功能,在生物医学应用中引起了极大的兴趣。然而,EDT的治疗效率在很大程度上受到低CPO递送效率和过氧化氢(H2O2)供应不足的限制。在目前的工作中,具有高CPO递送效率的MGBC的中性粒细胞模拟纳米酶,H2O2自供,和酶级联催化特性设计用于高效治疗耐甲氧西林金黄色葡萄球菌(MRSA)感染。在感染微环境中,MGBC可以有效地催化葡萄糖自我供应大量的H2O2,这使得能够通过CPO介导的催化反应持久地产生1O2。同时,MGBC还可以催化H2O2持续释放NO用于气体治疗(GT),协同增强EDT的治疗效果。因此,MGBC显示出有效的MRSA杀伤和MSRA生物膜根除特性,通过发挥协同的双峰EDT/GT治疗作用,可以有效治疗MRSA感染的全层切除伤口和皮下MRSA感染。深入的机制研究表明,MGBC的协同EDT/GT抗菌作用可以通过显著下调群体感应来减弱MRSA的耐药性和毒性。多药外排,毒力,和生物膜形成相关基因。
    Recently, chloroperoxidase (CPO)-mediated enzyme dynamic therapy (EDT) by mimicking the antipathogen function of neutrophils via generating highly active signet oxygen (1O2) has attracted great interest in biomedical applications. However, the therapeutic efficiency of EDT is largely restricted by the low CPO delivery efficiency and insufficient hydrogen peroxide (H2O2) supply. In the present work, a neutrophil-mimicking nanozyme of MGBC with high CPO delivery efficiency, H2O2 self-supply, and enzyme-cascade catalytic properties is designed for high-efficient treatment of methicillin-resistant Staphylococcus aureus (MRSA) infections. In the infection microenvironment, MGBC can effectively catalyze glucose to self-supply substantial H2O2, which enables long-lasting 1O2 generation via the CPO-mediated catalytic reaction. At the meantime, MGBC can also catalyze H2O2 to sustainably release NO for gas therapy (GT), which synergistically strengthens the therapeutic effect of EDT. As a result, MGBC displayed effective MRSA-killing and MSRA biofilms-eradicating properties, and high efficiency in treating both MRSA infected full-thickness excision wounds and subcutaneous MRSA infection by exerting the synergistic bimodal EDT/GT therapeutic effects. In-depth mechanism study revealed that the synergistic EDT/GT antibacterial effects of MGBC can attenuate the drug resistance and toxicity of MRSA by significantly downregulating quorum sensing, multidrug efflux, virulence, and biofilm formation-related genes.
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  • 文章类型: Journal Article
    目前,微生物污染问题已经在全球范围内给人类和动物带来了巨大的健康威胁。具体而言,包括细菌和病毒在内的微生物对水生生物表现出持久的生态毒性和各种疾病。在过去的十年里,光催化微生物灭活技术因其绿色,低成本,和可持续的过程。背景技术多种光催化剂已经用于杀死自然环境中的微生物。然而,目前的光催化消毒系统仍然存在两个主要的缺点,包括光催化剂的低活性和水特性的不同影响。到目前为止,各种策略来提高光催化剂的固有活性。除了光催化剂的改性,还对水体环境进行了优化,以增强微生物的灭活作用。在这个小型审查中,我们概述了微生物光催化杀菌的最新进展。同时,详细阐述了光催化剂改性的相关方法以及水体特性对消毒能力的影响。更重要的是,建立先进的光催化微生物灭活系统的策略与性能改善之间的关系。最后,提出了光催化消毒的前景和挑战。我们衷心希望这一重要的小型评论可以启发设计先进的光催化消毒系统的一些新概念和想法。
    Currently, microbial contamination issues have globally brought out a huge health threat to human beings and animals. To be specific, microorganisms including bacteria and viruses display durable ecological toxicity and various diseases to aquatic organisms. In the past decade, the photocatalytic microorganism inactivation technique has attracted more and more concern owing to its green, low-cost, and sustainable process. A variety kinds of photocatalysts have been employed for killing microorganisms in the natural environment. However, two predominant shortcomings including low activity of photocatalysts and diverse impacts of water characteristics are still displayed in the current photocatalytic disinfection system. So far, various strategies to improve the inherent activity of photocatalysts. Other than the modification of photocatalysts, the optimization of environments of water bodies has been also conducted to enhance microorganisms inactivation. In this mini-review, we outlined the recent progress in photocatalytic sterilization of microorganisms. Meanwhile, the relevant methods of photocatalyst modification and the influences of water body characteristics on disinfection ability were thoroughly elaborated. More importantly, the relationships between strategies for constructing advanced photocatalytic microorganism inactivation systems and improved performance were correlated. Finally, the perspectives on the prospects and challenges of photocatalytic disinfection were presented. We sincerely hope that this critical mini-review can inspire some new concepts and ideas in designing advanced photocatalytic disinfection systems.
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  • 文章类型: Journal Article
    抗微生物肽LRGG(LLRLLRGGRRLLRLLRLL-NH2)是在Jia等人进行的研究中设计和化学合成的。发现革兰氏阴性菌对LRGG敏感,并表现出高治疗指数。采用基因工程方法制备原核融合表达载体pQE-GFP-LRGG,随后表达并纯化得到的相应融合蛋白GFP-LRGG。然后通过TEV蛋白水解去除前体GFP,在另一轮纯化和去除内毒素后获得纯的LRGG。原核表达的抗菌肽LRGG对革兰氏阴性菌具有广谱抗菌作用,其对大肠杆菌的最低抑菌活性(MIC)可达2μg/mL。与化学合成的LRGG相比,原核表达的LRGG表现出相似的温度,pH值,盐离子,血清稳定性,和细胞选择性。此外,原核表达的LRGG在细胞选择性感染模型和无胚胎毒性的Galleriamellonella感染模型中均显示出出色的治疗效果。发现LRGG引起细菌死亡的机制是革兰氏阴性细胞膜的破坏。
    The antimicrobial peptide LRGG (LLRLLRRGGRRLLRLL-NH2) was designed and chemically synthesized in a study conducted by Jia et al. Gram-negative bacteria were found to be sensitive to LRGG and exhibited a high therapeutic index. Genetic engineering methods were used to create the prokaryotic fusion expression vector pQE-GFP-LRGG, and the resulting corresponding fusion protein GFP-LRGG was subsequently expressed and purified. The precursor GFP was then removed by TEV proteolysis, and pure LRGG was obtained after another round of purification and endotoxin removal. The prokaryotic-expressed antimicrobial peptide LRGG displays a broad-spectrum antibacterial effect on Gram-negative bacteria, and its minimum inhibitory activity (MIC) against Escherichia coli can reach 2 μg/mL. Compared to the chemically synthesized LRGG, the prokaryotic-expressed LRGG exhibits similar temperature, pH, salt ion, serum stability, and cell selectivity. Furthermore, prokaryotic-expressed LRGG showed excellent therapeutic effects in both the infection model of cell selectivity and no embryotoxicity in a Galleria mellonella infection model. The mechanism by which LRGG causes bacterial death was found to be the disruption of the Gram-negative cell membrane.
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