ATM mutation

  • 文章类型: Case Reports
    乳头状肾细胞癌(pRCC)是一种罕见的肾癌,治疗选择有限,转移时预后较差。我们介绍了一例42岁的男性,患有转移性pRCC,患有体性共济失调-毛细血管扩张症突变(ATM)突变,在我们机构接受了治疗。在ipilimumab/nivolumab的疾病进展(POD)后,其次是卡博替尼的POD,患者接受放射治疗,转移性颈淋巴结病至60Gy分15次,腹膜后淋巴结病至36Gy分9次,由于不宽容而被削减。随后是聚(ADP-核糖)聚合酶(PARP)抑制剂和派姆单抗的序贯全身治疗,也因不良反应而停药。尽管10个月没有接受任何治疗,他的病情保持稳定。我们认为,该ATM突变转移性pRCC患者的无进展生存期延长可能是由于ATM丢失导致肿瘤对放射治疗的敏感性增强。
    Papillary renal cell carcinoma (pRCC) is a rare kidney cancer with limited treatment options and poor outcomes when metastatic. We present a case of a 42-year-old male with metastatic pRCC harboring a somatic ataxia-telangiectasia mutated (ATM) mutation who was treated at our institution. After progression of disease (POD) on ipilimumab/nivolumab, followed by POD on cabozantinib, the patient was treated with radiation therapy to metastatic cervical lymphadenopathy to 60 Gy in 15 fractions as well as retroperitoneal lymphadenopathy to 36 Gy in 9 fractions, which was curtailed due to intolerance. This was followed by sequential systemic therapy with a poly (ADP-ribose) polymerase (PARP) inhibitor and pembrolizumab, which was also discontinued due to adverse effects. Despite not receiving any treatment for 10 months, his disease remains stable. We believe that the prolonged progression-free survival of this patient with ATM-mutation metastatic pRCC is likely due to the enhanced sensitivity of the tumor to radiation therapy due to ATM loss.
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  • 文章类型: Journal Article
    背景:共济失调毛细血管扩张症突变(ATM),顶端DNA损伤反应基因,是肿瘤中常见的突变基因,其突变可以增强肿瘤的免疫原性并改变PD-L1的表达,这可能有助于免疫检查点抑制剂(ICIs)的治疗。
    方法:本文综合分析了ATM突变的特点及其与ICIs治疗临床预后的关系。在癌症基因组图谱(TCGA)队列中,已发现ATM突变的总频率为4%(554/10953)。
    结果:有ATM突变的患者的TMB和MSI水平均明显高于无突变的患者(P<0.0001)。TMB中位数与ATM突变频率呈正相关(r=0.54,P=0.003)。在TCGA队列中,具有ATM突变的患者在总生存期方面具有更好的临床益处(OS,危险比(HR)=0.736,95%CI=0.623-0.869),无进展生存期(PFS,HR=0.761,95%CI=0.652-0.889),和无病生存率(DFS,HR=0.686,95%CI=0.512-0.919)]比无ATM突变的患者。随后,验证结果显示,在ICIs治疗的患者中,ATM突变与较长的OS显著相关(HR=0.710,95%CI=0.544~0.928).进一步研究表明,ATM突变与抗肿瘤免疫调节显著相关(P<0.05)。
    结论:我们的研究结果强调了ATM突变作为预测多种肿瘤ICIs治疗的一个有前景的生物标志物的价值。
    Ataxia telangiectasia mutated (ATM), an apical DNA damage response gene, is a commonly mutated gene in tumors, and its mutation could strengthen tumor immunogenicity and alter the expression of PD-L1, which potentially contributes to immune checkpoint inhibitors (ICIs) therapy.
    The characteristics of ATM mutation and its relationship with the ICIs-treated clinical prognosis have been analyzed comprehensively in this paper. The overall frequency of ATM mutations has been found to be 4% (554/10953) in the cancer genome atlas (TCGA) cohort.
    Both the TMB and MSI levels in patients with ATM mutations were significantly higher than those in patients without mutations (P < 0.0001). The median TMB was positively correlated with the frequency of ATM mutations (r = 0.54, P = 0.003). In the TCGA cohort, patients with ATM mutations had better clinical benefits in terms of overall survival (OS, hazard ratio (HR) = 0.736, 95% CI = 0.623 - 0.869), progression-free survival (PFS, HR = 0.761, 95% CI = 0.652 - 0.889), and disease-free survival (DFS, HR = 0.686, 95% CI = 0.512 - 0.919)] than patients without ATM mutations. Subsequently, the verification results showed ATM mutations to be significantly correlated with longer OS in ICIs-treated patients (HR = 0.710, 95% CI = 0.544 - 0.928). Further exploration indicated ATM mutation to be significantly associated with regulated anti-tumor immunity (P < 0.05).
    Our findings highlight the value of ATM mutation as a promising biomarker to predict ICIs therapy in multiple tumors.
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  • 文章类型: Case Reports
    随着体细胞肿瘤RNA测序在临床实践中的使用和整合,子宫内膜癌的治疗正在迅速发展。鉴于同源重组基因的突变很少见,有关子宫内膜癌中PARP抑制的数据很少。目前还没有FDA批准。一名50岁的gravida1para1女性,诊断为IVB期子宫内膜样低分化子宫内膜样腺癌,并提交给我们的综合癌症中心。手术分期后,她接受了卡铂/紫杉醇的辅助化疗,由于身体功能状态差和并发症而多次接受化疗.辅助化疗第3周期后腹部和骨盆的CT扫描显示复发性进行性疾病。她接受了一个周期的脂质体阿霉素,但由于严重的皮肤毒性而停止了治疗。根据鉴定的BRIP1突变,患者于2020年1月接受了Olaparib的体恤治疗.在此监测期间的影像学显示肝脏显着减少,腹膜,和腹膜外转移,最终患者在一年内获得了临床完全缓解。2022年12月的最新CTA/P显示腹部或骨盆中没有活动性复发或转移性疾病的部位。我们介绍了一例复发IVB期子宫内膜样腺癌患者的独特病例,该患者具有包括BRIP1在内的多个体细胞基因突变,在同情使用Olaparib3年后具有病理完全缓解。据我们所知,这是报道的首例对PARP抑制剂有病理完全缓解的高级别子宫内膜样子宫内膜癌病例.
    Treatment for endometrial cancer is rapidly evolving with the increased use and integration of somatic tumor RNA sequencing in clinical practice. There is a paucity of data regarding PARP inhibition in endometrial cancer given that mutations in homologous recombination genes are rare, and currently no FDA approval exists. A 50-year-old gravida 1 para 1 woman with a diagnosis of stage IVB poorly differentiated endometrioid endometrial adenocarcinoma presented to our comprehensive cancer center. Following surgical staging, she was placed on adjuvant chemotherapy with carboplatin/paclitaxel which was held multiple times due to poor performance status and complications. CT scan of the abdomen and pelvis following cycles 3 of adjuvant chemotherapy showed recurrent progressive disease. She received one cycle of liposomal doxorubicin but discontinued it due to severe cutaneous toxicity. Based on the BRIP1 mutation identified, the patient was placed on compassionate use of Olaparib in January 2020. Imaging during this surveillance period showed a significant decrease in hepatic, peritoneal, and extraperitoneal metastases, and eventually the patient had a clinical complete response in a year. The most recent CT A/P in December 2022 showed no sites of active recurrent or metastatic disease in the abdomen or pelvis. We present a unique case of a patient with recurrent stage IVB poorly differentiated endometrioid endometrial adenocarcinoma with multiple somatic gene mutations including BRIP1, who had a pathologic complete response following compassionate use of Olaparib for 3 years. To our knowledge, this is the first reported case of high grade endometrioid endometrial cancer that has shown a pathologic complete response to a PARP inhibitor.
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  • 文章类型: Case Reports
    共济失调毛细血管扩张突变(ATM)基因中的种系突变与辐射敏感性增加有关。目前文献对杂合种系ATM突变的患者在接受放射治疗(RT)治疗时是否有更大的放射相关毒性风险缺乏共识。很少有数据考虑更现代和适形的RT技术,如立体定向放射外科(SRS)。我们的报告介绍了两例使用SRS治疗脑转移的杂合种系ATM突变患者。1例患者发生3级放射性坏死(RN)的放射16.3cm3切除腔,但在接受SRS治疗的点状脑转移的其他部位未出现RN。同样,第二份报告描述了一名患者,该患者在31个亚厘米(均≤5mm)脑转移的照射部位均未出现RN.所描述的病例表明,一些具有种系ATM变异的患者可以安全地接受SRS治疗较小的脑转移;然而,对于靶点较大或既往有放射毒性史的患者,应考虑临床谨慎.鉴于这些发现以及围绕ATM变体的放射敏感性程度的挥之不去的不确定性,需要进一步的研究来确定在放疗敏感人群中治疗较大的脑转移时,更保守的剂量-体积限制是否有可能降低RN的风险.
    Germline mutations in the ataxia telangiectasia mutated (ATM) gene are associated with increased radiation sensitivity. Present literature lacks consensus on whether patients with heterozygous germline ATM mutations may be at greater risk of radiation-associated toxicities when treated with radiation therapy (RT), and there is little data considering more modern and conformal RT techniques such as stereotactic radiosurgery (SRS). Our report presents two cases of patients with heterozygous germline ATM mutations treated with SRS for brain metastases. One patient developed grade 3 radiation necrosis (RN) of an irradiated 16.3 cm3 resection cavity, but did not develop RN at other sites of punctate brain metastases treated with SRS. Similarly, the second report describes a patient who did not develop RN at any of the 31 irradiated sites of sub-centimeter (all ≤5 mm) brain metastases. The described cases demonstrate that some patients with germline ATM variants can safely undergo SRS for smaller brain metastases; however, clinical caution should be considered for patients with larger targets or a history of prior radiation toxicity. Given these findings and the lingering uncertainty surrounding the degree of radiosensitivity across ATM variants, future research is needed to determine whether more conservative dose-volume limits would potentially mitigate the risk of RN when treating larger brain metastases in this radiosensitive population.
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  • 文章类型: Case Reports
    子宫腺肉瘤是一种罕见的妇科恶性肿瘤,10-25%的病例表现出临床攻击行为。尽管TP53突变经常在子宫的高级别腺肉瘤中被发现,在子宫腺肉瘤中尚未发现确定的基因改变。具体来说,没有报道描述子宫腺肉瘤中同源重组缺陷相关基因的突变。本研究提供了一例子宫腺肉瘤,无肉瘤过度生长,但TP53突变表现出临床攻击行为。病人有ATM突变,这是一个与同源重组缺陷相关的基因,并表现出对铂类化学疗法的良好反应和聚(ADP-核糖)聚合酶抑制剂的可能治疗靶标。
    Uterine adenosarcoma is a rare gynecologic malignancy, and 10-25% of the cases exhibit clinically aggressive behaviors. Although TP53 mutations are frequently identified in high-grade adenosarcomas of the uterus, definitive gene alterations have not been identified in uterine adenosarcomas. Specifically, no reports have described mutations in homologous recombination deficiency-related genes in uterine adenosarcomas. This study presents a case of uterine adenosarcoma without sarcomatous overgrowth but with TP53 mutation that exhibited clinically aggressive behaviors. The patient had an ATM mutation, which is a gene associated with homologous recombination deficiency, and exhibited a good response against platinum-based chemotherapy and possible therapeutic target by poly(ADP-ribose) polymerase inhibitors.
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  • 文章类型: Case Reports
    共济失调毛细血管扩张突变(ATM)蛋白是一种传感器和信号转换器,可将DNA损伤的信号进一步放大并传达给细胞周期停滞的介质,凋亡,和衰老(p16,p19,p21,BAX等。),这是通过细胞应力的强度而改变的。由于它们的激酶活性,它们能够充当识别和信号蛋白。典型的共济失调毛细血管扩张与ATM基因的纯合突变有关,完全不存在其激酶活性和/或有害的ATM基因突变,如截断/无义突变,功能缺失突变,非保守替代,移码,和删除。另一方面,变体共济失调-毛细血管扩张症(A-T)与残余激酶活性的存在有关。我们报告了一名6岁的男性患者,他向我们提出了异常的颈部运动作为他的最初投诉。ATM基因剖析显示ATM基因的罕见致病变异。该变体是ATM基因外显子2中的纯合无义突变,导致终止密码子的形成和外显子2密码子23处蛋白质的过早截短(p。Arg23Ter)。总之,我们报告了一个典型的A-T。对于患有运动障碍的儿科患者,我们应该进行长期随访,并保持较低的家谱分析和基因检测门槛。在资源有限的情况下,患者无法普遍使用激酶测定,基于网络的突变预测工具可能有利于预测突变的有害影响。
    The ataxia telangiectasia mutant (ATM) protein is a sensor and signal transducer that amplifies and communicates signals of DNA damage further to the mediators of cell cycle arrest, apoptosis, and senescence (p16, p19, p21, BAX etc.) which is modified by the strength of the cellular stress. They are able to act as recognition and signaling proteins because of their kinase activity. Classic ataxia telangiectasia is associated with homozygous mutations of the ATM gene, the complete absence of its kinase activity and/or deleterious ATM gene mutations such as truncation/nonsense mutations, loss of function mutation, non-conservative substitutions, frameshift, and deletions. On the other hand, variant ataxia-telangiectasia (A-T) is associated with the presence of residual kinase activity. We report a six-year-old male patient who presented to us with abnormal neck movements as his initial complaint. ATM gene analysis showed a rare pathogenic variant of the ATM gene. The variant was a homozygous nonsense mutation in exon 2 of the ATM gene that resulted in the formation of a stop codon and premature truncation of the protein at codon 23 in exon 2 (p.Arg23Ter). In conclusion, we report a case of an unusual presentation of classic A-T. We should pursue a long-term follow-up and maintain a low threshold for performing pedigree analysis and genetic testing in pediatric patients with movement disorders. In resource-limited settings where kinase enzyme assays are not universally available to patients, web-based mutation prediction tools may be beneficial to predict the deleterious effects of the mutation.
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  • 文章类型: Case Reports
    小细胞食管癌(SCEC)是一种罕见的,未分化类型的癌症,恶性程度较高,早期全身转移。放化疗和手术已被用作SCEC的主要治疗策略。但两者都会导致预后不良.需要开发针对该疾病的最佳标准治疗以改善预后并限制相关死亡率。在这项研究中,我们描述了ATM中驱动突变的鉴定,参与同源重组缺陷(HRD)途径的基因,对SCEC患者的原发灶和外周血进行下一代测序,切除和放化疗后复发。此外,我们给病人服用奥拉帕利,PARP抑制剂,用于治疗HRD肿瘤并获得部分缓解。这是奥拉帕尼成功治疗具有ATM突变的SCEC的第一个证据。研究结果表明,使用奥拉帕尼靶向HRD基因突变或使用相应药物可操作的基因突变,可能是SCEC的有效治疗选择,尽管这需要进一步调查。
    Small cell esophageal carcinoma (SCEC) is a rare, undifferential type of cancer, with a high degree of malignancy and early systemic metastasis. Radio-chemotherapy and surgery have been used as the primary treatment strategies for SCEC, but they both result in poor prognosis. There is need to develop an optimal standard treatment for the disease to improve prognosis and limit the related mortality. In this study, we described identification of driver mutations in ATM, a gene involved in homologous recombination deficiency (HRD) pathway, using next-generation sequencing on primary lesion and peripheral blood of a SCEC patient, who experienced recurrence after resection and radio-chemotherapy. In addition, we subjected the patient to olaparib, a PARP inhibitor, for the treatment of tumor with HRD and obtained a partial response. This is the first evidence implicating olaparib in successful treatment of SCEC with ATM mutation. The findings suggest that targeting mutations in HRD genes using olaparib or actionable genetic mutations using corresponding drugs, may be an effective therapeutic option for SCEC, although this requires further investigation.
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  • 文章类型: Case Reports
    聚ADP核糖聚合酶(PARP)抑制剂在各种肿瘤中用作抗癌治疗的适应症不断增加。其中大多数与BRCA缺乏症有关。临床前数据支持PARP抑制剂在其他表现为“BRCAness”或同源重组缺陷(HRD)的肿瘤中作为单一疗法以及与化疗联合使用的研究。在当前的报告中,我们介绍了一个经过大量预处理的55岁男性患者,诊断为IV期ATM缺陷CRC。在用尽所有可用的治疗选择后,使用标签外的奥拉帕利-伊立替康组合有效治疗;此外,我们讨论了现有数据,这些数据为在ATM缺陷型CRC中使用PARP抑制剂提供了证据,并鼓励在没有其他可用治疗方案的患者中实施下一代测序(NGS).
    Poly-ADP ribose polymerase (PARP) inhibitors are constantly increasing in their indications for use as anti-cancer treatment in various neoplasms, the majority of which are linked with BRCA deficiency. Preclinical data support the investigation of PARP inhibitors in other neoplasms exhibiting \"BRCAness\" or homologous recombination deficiency (HRD) as monotherapy as well as in combination with chemotherapy. With the current report we present the case of a heavily pretreated 55-year-old male patient diagnosed with stage IV ATM-deficient CRC, who was effectively treated with an off-label olaparib-irinotecan combination after exhaustion of all available treatment choices; furthermore, we discuss the existing data providing evidence for the use of PARP inhibitors in ATM-deficient CRC and encourage the implementation of next-generation sequencing (NGS) in patients with no other available treatment options.
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  • 文章类型: Journal Article
    背景:ATM蛋白是p53上游信号转导途径的重要组成部分,在诱导DNA双链断裂(DSB)后激活,并导致转录前凋亡基因激活,使DNA修复同步。
    目的:多项研究评估了慢性淋巴细胞白血病(CLL)患者ATM突变与临床预后之间的关系。然而,其预后价值尚未完全阐明.因此,本meta分析旨在探讨ATM突变对CLL患者预后的影响.
    方法:选定的临床研究是从各种电子数据库中提取的,例如PubMed,EMBASE,Cochrane图书馆,和WebofScience。在我们的荟萃分析中,选择总生存期(OS)的危险比(HR)和95%置信区间(CI)来估计ATM突变的预后影响,并将ATM突变与野生型突变进行比较。
    结果:共收集了来自7项研究的1299名患者。合并的OSHR建议CLL患者预后较差,HR=1.24(95%CI:0.97-1.59)。在CLL患者中发现ATM突变的发生率为15.8%。Begg和Egger的测试在研究之间没有显示出任何明显的偏差。
    结论:结论:这项荟萃分析显示,ATM突变与CLL患者的不良预后效应显著相关.然而,需要对大量具有不同类型ATM突变的患者进行随机对照前瞻性研究,以证明这些结果.
    BACKGROUND: The ATM protein acts as an essential part of the signal transduction pathway upstream of p53 which activates following induction of DNA double-strand breaks (DSBs) and leads to transcriptional proapoptotic genes activation that synchronizes DNA repair.
    OBJECTIVE: Several studies have assessed the relationship between ATM mutations and the clinical prognosis in patients with chronic lymphocytic leukemia (CLL). However, its prognostic value has not yet been fully clarified. Hence, we aimed this meta-analysis to investigate the prognostic effect of ATM mutations in patients with CLL.
    METHODS: The selected clinical studies were extracted from various electronic databases such as PubMed, EMBASE, the Cochrane Library, and Web of Science. In our meta-analysis, Hazard Ratio (HRs) and 95 % confidence interval (CI) for overall survival (OS) were chosen to estimate the prognostic impact of ATM mutations and to compare ATM mutations to those with wild-type.
    RESULTS: A total of 1299 patients from seven studies were collected. The pooled HRs for OS recommended that patients with CLL had a poorer prognosis HR = 1.24 (95 % CI: 0.97-1.59). The incidence of ATM mutations was found 15.8 % in patients with CLL. Begg\'s and Egger\'s tests did not show any significant bias between studies.
    CONCLUSIONS: In conclusion, this meta-analysis indicated that ATM mutations were significantly associated with adverse prognostic effect in patients with CLL. However, a randomized controlled prospective study with a large number of patients with different types of ATM mutations is required to assert these results.
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  • 文章类型: Case Reports
    报告一例侵袭性婴儿眼眶胚胎性横纹肌肉瘤,如下一代测序和个性化治疗的潜在应用所揭示的,具有种系ATM突变和2个体细胞突变。
    一名7个月大的男性由于眼眶内肿块大,在6周内出现了快速进行性的左眼球突出。活检显示胚胎性横纹肌肉瘤。第一个周期化疗后,再显像显示肿瘤间期增大伴颅内扩展。开颅手术,结合眼眶切除术,已执行。将肿瘤样本和血液样本用于596个基因DNA测序面板,其中RNA测序专注于可操作的突变以及基因融合检测。测序显示3个临床相关突变:种系ATM功能丧失(LOF)突变,体细胞PIK3CA功能获得突变,和体细胞BCORLOF突变。未检测到染色体易位。转移的检查对骨髓受累呈阳性。尽管标准的高剂量辅助化疗联合放射治疗,患者10个月后死于转移性疾病.
    该病例突出了婴儿眼眶中一种侵袭性的胚胎性横纹肌肉瘤。种系突变的存在可以解释化疗耐药增加和不良预后。并且可以用作基因组定向治疗的靶标。
    UNASSIGNED: To report a case of aggressive infantile orbital embryonal rhabdomyosarcoma harboring germline ATM mutation and 2 somatic mutations as revealed by next-generation sequencing and the potential application for personalized therapy.
    UNASSIGNED: A 7-month-old male developed a rapidly progressive left proptosis over 6 weeks due to a large medial orbital mass. Biopsy revealed embryonal rhabdomyosarcoma. After the first cycle of chemotherapy, re-imaging showed interval tumor enlargement with intracranial extension. Craniotomy, combined with orbital exenteration, was performed. Tumor specimens and blood samples were sent for 596 gene DNA sequencing panels with RNA-sequencing focused on actionable mutations as well as gene fusion detection. Sequencing revealed 3 clinically relevant mutations: a germline ATM loss-of-function (LOF) mutation, a somatic PIK3CA gain-of-function mutation, and a somatic BCOR LOF mutation. No chromosomal translocation was detected. Workup for metastasis was positive for bone marrow involvement. Despite standard high-dose adjuvant chemotherapy in combination with radiation therapy, the patient died 10 months later with metastatic diseases.
    UNASSIGNED: This case highlights an aggressive form of embryonal rhabdomyosarcoma in an infantile orbit. The presence of germline mutation may explain the increased chemo-resistance and adverse prognosis, and may be used as the target for genomic-directed therapy.
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