3D registration

  • 文章类型: Journal Article
    计算机视觉的研究小组,图形,机器学习已经将大量的注意力集中在3D对象重建领域,增强,和注册。深度学习是人工智能中用于解决计算机视觉挑战的主要方法。然而,三维数据的深度学习存在明显的障碍,现在正处于起步阶段。特别是针对三维数据的深度学习取得了重大进展,提供一系列解决这些问题的方法。本研究全面考察了深度学习方法的最新进展。我们检查了许多用于3D对象配准任务的基准模型,增强,和重建。我们彻底分析他们的架构,优势,和约束。总之,本报告全面概述了三维深度学习的最新进展,并强调了未来需要解决的尚未解决的研究领域。
    The research groups in computer vision, graphics, and machine learning have dedicated a substantial amount of attention to the areas of 3D object reconstruction, augmentation, and registration. Deep learning is the predominant method used in artificial intelligence for addressing computer vision challenges. However, deep learning on three-dimensional data presents distinct obstacles and is now in its nascent phase. There have been significant advancements in deep learning specifically for three-dimensional data, offering a range of ways to address these issues. This study offers a comprehensive examination of the latest advancements in deep learning methodologies. We examine many benchmark models for the tasks of 3D object registration, augmentation, and reconstruction. We thoroughly analyse their architectures, advantages, and constraints. In summary, this report provides a comprehensive overview of recent advancements in three-dimensional deep learning and highlights unresolved research areas that will need to be addressed in the future.
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  • 文章类型: Journal Article
    在当代实践中,口内扫描和锥形束计算机断层扫描(CBCT)是广泛采用的技术,用于牙齿定位和获取全面的三维模型。尽管他们的效用,每个数据集都有固有的优点和局限性,促使人们追求一个合并的优化解决方案。因此,这项研究引入了一种新颖的3D配准方法,旨在协调这些不同的数据集以提供整体视角。在预处理阶段,重新训练的Mask-RCNN被部署在矢状和全景投影上,以从包含的CBCT原始数据中划分上牙和下牙。同时,提出了一种彩色分类模型,用于在口内扫描数据中从牙齿结构中分离牙龈组织。随后,分离的数据集基于牙冠对齐,采用稳健的RANSAC和ICP算法。为了评估拟议方法的有效性,对应点之间的欧氏距离进行统计评估。此外,牙科专家,包括两名正畸医生和一名经验丰富的普通牙医,通过测量牙齿表面标志之间的距离来评估临床潜力。利用所提出的技术,在自动配准的数据集中,口内扫描数据和CBCT数据之间的对应点距离的计算误差被量化为0.234±0.019mm,显著低于0.3mmCBCT体素尺寸。此外,专家确定的地标之间的平均测量差异范围为0.368至1.079毫米,强调了所提出方法的承诺。
    In contemporary practice, intraoral scans and cone-beam computed tomography (CBCT) are widely adopted techniques for tooth localization and the acquisition of comprehensive three-dimensional models. Despite their utility, each dataset presents inherent merits and limitations, prompting the pursuit of an amalgamated solution for optimization. Thus, this research introduces a novel 3D registration approach aimed at harmonizing these distinct datasets to offer a holistic perspective. In the pre-processing phase, a retrained Mask-RCNN is deployed on both sagittal and panoramic projections to partition upper and lower teeth from the encompassing CBCT raw data. Simultaneously, a chromatic classification model is proposed for segregating gingival tissue from tooth structures in intraoral scan data. Subsequently, the segregated datasets are aligned based on dental crowns, employing the robust RANSAC and ICP algorithms. To assess the proposed methodology\'s efficacy, the Euclidean distance between corresponding points is statistically evaluated. Additionally, dental experts, including two orthodontists and an experienced general dentist, evaluate the clinical potential by measuring distances between landmarks on tooth surfaces. The computed error in corresponding point distances between intraoral scan data and CBCT data in the automatically registered datasets utilizing the proposed technique is quantified at 0.234 ± 0.019 mm, which is significantly below the 0.3 mm CBCT voxel size. Moreover, the average measurement discrepancy among expert-identified landmarks ranges from 0.368 to 1.079 mm, underscoring the promise of the proposed method.
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  • 文章类型: Journal Article
    目的:由于骨骼暴露有限,关节成形术可能具有挑战性。然而,例如在肩关节成形术中,关节盂的良好定位对于降低翻修手术的风险至关重要.为了改善程序的结果,混合现实可以用作一个指导系统依赖于基本的配准步骤之间的病人的骨骼和其相应的3D模型。
    方法:我们介绍了使用Hololens2头戴式显示器进行肩关节成形术的完整注册工作流程。我们依靠我们基于标记的跟踪系统进行的收购,一种改进的迭代最近点算法和验证步骤。我们的精度目标是关节盂导丝进入点在前后轴和超下轴上的1.5±1.5毫米,倾斜度和版本见1.5±1[公式:见正文]。整个过程必须持续少于5分钟。
    结果:我们对所有类型的13个3D打印关节盂骨的队列进行了评估,对于进入点,前后轴的平均精度为0.84±0.58mm,而下轴的平均精度为0.49±0.41mm。至于倾斜度和版本,我们有0.89±0.6[公式:见正文]和0.97±0.8[公式:见正文],分别。平均处理时间约为1分钟24秒。
    结论:我们开发了一个完整的,嵌入式注册工作流程和验证协议,以评估我们的准确性。我们的结果对于改善关节盂导丝的放置是有希望的。此外,一切都是在外科医生的视野中进行的,这让他们完全专注于手术部位。
    OBJECTIVE: Arthroplasty surgery can be challenging because of limited exposure of the bones. However, in shoulder arthroplasty for example, a good positioning of the glenoid component is essential to mitigate risks of revision surgeries. To improve the procedure\'s outcomes, mixed reality can be used as a guidance system relying on a fundamental registration step between the patient\'s bone and its corresponding 3D model.
    METHODS: We present a complete registration workflow for shoulder arthroplasty using Hololens 2 Head Mounted Display. We rely on acquisitions made thanks to our marker-based tracking system, an improved Iterative Closest Point algorithm and verification steps. Our accuracy targets are 1.5 ± 1.5 mm for the glenoid guidewire entry point on both antero-posterior and supero-inferior axes, and 1.5 ± 1[Formula: see text] for inclination and version. The overall process must last less than 5 min.
    RESULTS: We have evaluated our process on a cohort of 13 3D printed glenoid bones of all types, showing an average accuracy of 0.84 ± 0.58 mm on the antero-posterior axis and 0.49 ± 0.41 mm on the supero-inferior one for the entry point. As for inclination and version, we have 0.89 ± 0.6[Formula: see text] and 0.97 ± 0.8[Formula: see text], respectively. The mean process time is about 1 min 24 s.
    CONCLUSIONS: We have developed a complete, embedded registration workflow and a verification protocol to evaluate our accuracy. Our results are promising for the improvement of the glenoid guidewire placement. Moreover, everything is performed in the field of view of the surgeon, which allows them to fully concentrate on the surgical site.
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  • 文章类型: Journal Article
    随着“隐喻”概念的普及,增强现实(AR)技术作为其底层技术支持,正逐渐被应用到人们的日常生活中。近年来,室内家具的快速三维重建成为满足AR购物需求的一种新方法。在本文中,设计了一个虚拟家居环境系统,并对系统中的相关核心技术进行了研究。对包含复杂背景的家具图像进行背景去除和实例分割,在传统前景背景分离技术的基础上,提出了贝叶斯分类器和GrabCut(BCGC)算法。重构部分以经典的占用网络重构算法为网络基础,提出了一种精确的占用网络(PONET)算法,可以重建家具图像的结构细节,提高了模型精度。由于传统的三维配准模型容易出现模型位置偏移和与场景匹配不准确的问题,改进了基于AKAZE的跟踪配准算法,提出了一种基于AKAZE的多重滤波AKAZE(MF-AKAZE)算法来去除匹配点。通过在进一步筛选匹配结果的基础上改进RANSAC滤波误匹配算法来提高匹配精度。最后,验证了该系统实现了AR可视化家具模型的功能,能较好地完成重建以及配准效果。
    With the popularization of the concept of \"metaverse\", Augmented Reality (AR) technology is slowly being applied to people\'s daily life as its underlying technology support. In recent years, rapid 3D reconstruction of interior furniture to meet AR shopping needs has become a new method. In this paper, a virtual home environment system is designed and the related core technologies in the system are studied. Background removal and instance segmentation are performed for furniture images containing complex backgrounds, and a Bayesian Classifier and GrabCut (BCGC) algorithm is proposed to improve on the traditional foreground background separation technique. The reconstruction part takes the classical occupancy network reconstruction algorithm as the network basis and proposes a precise occupancy network (PONet) algorithm, which can reconstruct the structural details of furniture images, and the model accuracy is improved. Because the traditional 3D registration model is prone to the problems of model position shift and inaccurate matching with the scene, the AKAZE-based tracking registration algorithm is improved, and a Multiple Filtering-AKAZE (MF-AKAZE) based on AKAZE is proposed to remove the matching points. The matching accuracy is increased by improving the RANSAC filtering mis-matching algorithm based on further screening of the matching results. Finally, the system is verified to realize the function of the AR visualization furniture model, which can better complete the reconstruction as well as registration effect.
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  • 文章类型: Journal Article
    目的:创伤后腓骨畸形改变踝关节生物力学并可能导致疼痛,刚度,和过早的骨关节炎。准确的修复是重建手术成功的关键。这项研究的目的是分析使用对侧解剖结构的不同节段恢复腓骨远端的新型三维(3D)配准算法的准确性。
    方法:根据96对小腿的计算机断层摄影数据重建了三角形3D表面模型。定义了四个节段:25%胫骨,50%胫骨,75%腓骨,75%的腓骨和胫骨.使用表面配准算法将镜像对侧模型叠加在原始模型上。测量腓骨远端修复的准确性。
    结果:中值旋转误差,3D距离(欧几里得距离),使用远端25%胫骨段进行配准的3D角度(欧拉角度)为0.8°(-1.7-4.8),2.1mm(1.4-2.9),和2.9°(1.9-5.4),分别。使用75%腓骨段(旋转误差3.2°(0.1-8.3);欧几里得距离4.2mm(3.1-5.8);欧拉角5.8°(3.4-9.2)),修复显示出最高的误差。翻译误差在片段之间没有显著差异。
    结论:对侧胫骨和腓骨的3D配准可靠地接近了腓骨远端的病前解剖结构。25%的胫骨远端登记,包括腓骨切迹和踝丘的独特解剖标志,以越来越高的准确性恢复了解剖结构,最小化旋转和平移误差。这种评估错误复位的新方法可以降低踝关节骨折患者的发病率。
    方法:IV.
    OBJECTIVE: Posttraumatic fibular malunion alters ankle joint biomechanics and may lead to pain, stiffness, and premature osteoarthritis. The accurate restoration is key for success of reconstructive surgeries. The aim of this study was to analyze the accuracy of a novel three-dimensional (3D) registration algorithm using different segments of the contralateral anatomy to restore the distal fibula.
    METHODS: Triangular 3D surface models were reconstructed from computed tomographic data of 96 paired lower legs. Four segments were defined: 25% tibia, 50% tibia, 75% fibula, and 75% fibula and tibia. A surface registration algorithm was used to superimpose the mirrored contralateral model on the original model. The accuracy of distal fibula restoration was measured.
    RESULTS: The median rotation error, 3D distance (Euclidean distance), and 3D angle (Euler\'s angle) using the distal 25% tibia segment for the registration were 0.8° (- 1.7-4.8), 2.1 mm (1.4-2.9), and 2.9° (1.9-5.4), respectively. The restoration showed the highest errors using the 75% fibula segment (rotation error 3.2° (0.1-8.3); Euclidean distance 4.2 mm (3.1-5.8); Euler\'s angle 5.8° (3.4-9.2)). The translation error did not differ significantly between segments.
    CONCLUSIONS: 3D registration of the contralateral tibia and fibula reliably approximated the premorbid anatomy of the distal fibula. Registration of the 25% distal tibia, including distinct anatomical landmarks of the fibular notch and malleolar colliculi, restored the anatomy with increasing accuracy, minimizing both rotational and translational errors. This new method of evaluating malreductions could reduce morbidity in patients with ankle fractures.
    METHODS: IV.
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  • 文章类型: Journal Article
    本文提出了一种新技术,用于在使用3D(维度)关节集校准多视图RGB-D相机后执行3D静态点云配准。校准多视角相机需要一致的特征点,精确的特征点是获得高精度校准结果所必需的。总的来说,一个特殊的工具,比如棋盘,用于校准多视图摄像机。然而,本文使用人体骨骼上的关节作为校准多视点相机的特征点,无需特殊工具即可有效地进行校准。我们提出了一种基于RGB-D的校准算法,该算法使用通过姿态估计获得的3D关节集的关节坐标作为特征点。由于多视角相机捕获的人体信息可能不完整,基于由此获得的图像信息预测的联合集可能是不完整的。在有效地将多个不完整的关节集集成到一个关节集中之后,多视点相机可以通过使用组合的联合集来获得外部矩阵来校准。为了提高校准的准确性,多个联合集用于通过时间迭代进行优化。我们通过实验证明,可以使用大量不完整的关节集校准多视图相机。
    This paper proposes a new technique for performing 3D static-point cloud registration after calibrating a multi-view RGB-D camera using a 3D (dimensional) joint set. Consistent feature points are required to calibrate a multi-view camera, and accurate feature points are necessary to obtain high-accuracy calibration results. In general, a special tool, such as a chessboard, is used to calibrate a multi-view camera. However, this paper uses joints on a human skeleton as feature points for calibrating a multi-view camera to perform calibration efficiently without special tools. We propose an RGB-D-based calibration algorithm that uses the joint coordinates of the 3D joint set obtained through pose estimation as feature points. Since human body information captured by the multi-view camera may be incomplete, a joint set predicted based on image information obtained through this may be incomplete. After efficiently integrating a plurality of incomplete joint sets into one joint set, multi-view cameras can be calibrated by using the combined joint set to obtain extrinsic matrices. To increase the accuracy of calibration, multiple joint sets are used for optimization through temporal iteration. We prove through experiments that it is possible to calibrate a multi-view camera using a large number of incomplete joint sets.
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  • 文章类型: Journal Article
    我们提供了一个数据库,旨在实时定量分析三维重建和对齐方法,包含来自10个受试者/物体的3140个点云。这些场景是用高分辨率3D扫描仪获取的。它包含深度图,产生平均超过500k点的点云。该数据集可用于开发新的模型和对齐策略,以根据光学扫描仪或基准测试目的获取的数据自动重建3D场景。
    We provide a database aimed at real-time quantitative analysis of 3D reconstruction and alignment methods, containing 3140 point clouds from 10 subjects/objects. These scenes are acquired with a high-resolution 3D scanner. It contains depth maps that produce point clouds with more than 500k points on average. This dataset is useful to develop new models and alignment strategies to automatically reconstruct 3D scenes from data acquired with optical scanners or benchmarking purposes.
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  • 文章类型: Journal Article
    血管内超声(IVUS)成像可提供准确的横截面血管信息。为此,记录在两个时间点获得的瞬时IVUS回撤可以帮助临床医生准确评估血管的病理生理变化。疾病进展和治疗干预的效果。在本文中,我们提出了一种新颖的两阶段配准框架,用于对齐纵向和轴向IVUS回撤对。最初,我们使用基于动态时间规整(DTW)的算法以时间方式对齐回调。随后,一种基于强度的配准方法,利用Harmony搜索优化器的变体通过最大化它们的互信息来注册每个匹配的回调对,是应用的。所提出的方法是完全自动化的,只需要两个单一的基于全局图像的测量,与其他需要提取基于形态学的特征的方法不同。使用的数据包括42个合成生成的回调对,实现每次回调0.1853帧的对准误差,旋转误差为0.93°,平移误差为0.0161mm。此外,它还在11基线和随访中进行了测试,以及来自两个临床中心的10个基线和支架部署后真实IVUS回撤对,纵向配准的对准误差为4.3±3.9,距离和旋转误差为0.56±0.323mm和12.4°±10.5°,分别,轴向配准。尽管所提出的方法的性能与最先进的方法不匹配,我们的方法依赖于计算较轻的计算步骤,这在实时应用中至关重要。另一方面,在考虑轴向配准时,所提出的方法的性能甚至更好。结果表明,所提出的方法可以支持基于顺序成像检查的临床决策和诊断。
    Intravascular ultrasound (IVUS) imaging offers accurate cross-sectional vessel information. To this end, registering temporal IVUS pullbacks acquired at two time points can assist the clinicians to accurately assess pathophysiological changes in the vessels, disease progression and the effect of the treatment intervention. In this paper, we present a novel two-stage registration framework for aligning pairs of longitudinal and axial IVUS pullbacks. Initially, we use a Dynamic Time Warping (DTW)-based algorithm to align the pullbacks in a temporal fashion. Subsequently, an intensity-based registration method, that utilizes a variant of the Harmony Search optimizer to register each matched pair of the pullbacks by maximizing their Mutual Information, is applied. The presented method is fully automated and only required two single global image-based measurements, unlike other methods that require extraction of morphology-based features. The data used includes 42 synthetically generated pullback pairs, achieving an alignment error of 0.1853 frames per pullback, a rotation error 0.93° and a translation error of 0.0161 mm. In addition, it was also tested on 11 baseline and follow-up, and 10 baseline and post-stent deployment real IVUS pullback pairs from two clinical centres, achieving an alignment error of 4.3±3.9 for the longitudinal registration, and a distance and a rotational error of 0.56±0.323 mm and 12.4°±10.5°, respectively, for the axial registration. Although the performance of the proposed method does not match that of the state-of-the-art, our method relies on computationally lighter steps for its computations, which is crucial in real-time applications. On the other hand, the proposed method performs even or better that the state-of-the-art when considering the axial registration. The results indicate that the proposed method can support clinical decision making and diagnosis based on sequential imaging examinations.
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  • 文章类型: Journal Article
    局部表面的三维特征描述是三维计算机视觉的核心技术。由于噪声,现有的描述符在独特性和鲁棒性方面表现不佳,网格抽取,杂乱,和真实场景中的遮挡。在本文中,我们提出了使用点对变换特征直方图(PPTFHs)来解决这些挑战的3D局部表面描述符。PPTFH描述符的生成过程由三个步骤组成。首先,引入了一种简单而有效的策略,将局部表面上的点对集划分为四个子集。然后,通过点对变换特征生成对应于每个点对子集的三个特征直方图,它们是使用建议的Darboux框架计算的。最后,将四个子集的所有特征直方图连接成一个向量以生成总体PPTFH描述符。在几个流行的基准数据集上评估PPTFH描述符的性能,并且结果表明,与最先进的算法相比,PPTFH描述符在描述性和鲁棒性方面实现了卓越的性能。从五个基准数据集获得的结果证明了PPTFH描述符用于3D表面匹配的优势。
    Three-dimensional feature description for a local surface is a core technology in 3D computer vision. Existing descriptors perform poorly in terms of distinctiveness and robustness owing to noise, mesh decimation, clutter, and occlusion in real scenes. In this paper, we propose a 3D local surface descriptor using point-pair transformation feature histograms (PPTFHs) to address these challenges. The generation process of the PPTFH descriptor consists of three steps. First, a simple but efficient strategy is introduced to partition the point-pair sets on the local surface into four subsets. Then, three feature histograms corresponding to each point-pair subset are generated by the point-pair transformation features, which are computed using the proposed Darboux frame. Finally, all the feature histograms of the four subsets are concatenated into a vector to generate the overall PPTFH descriptor. The performance of the PPTFH descriptor is evaluated on several popular benchmark datasets, and the results demonstrate that the PPTFH descriptor achieves superior performance in terms of descriptiveness and robustness compared with state-of-the-art algorithms. The benefits of the PPTFH descriptor for 3D surface matching are demonstrated by the results obtained from five benchmark datasets.
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  • 文章类型: Journal Article
    背景:在光学相干断层扫描血管造影(OCTA)的临床应用中,重复扫描和平均方法可以提供更好的对比度,并减少最终结果中的斑点噪声,这对于高精度地可视化和量化血管成分是有用的,再现性,和可靠性。然而,不可避免的患者运动对这种方法提出了挑战。这项研究的目的是通过引入3D配准方法来配准光学相干断层扫描(OCT)/OCTA扫描,以对多个扫描进行精确的体积平均,从而改善信噪比(SNR)并提高量化精度,从而应对这一挑战。
    方法:所提出的方法利用了刚性仿射变换和非刚性B样条变换,其中通过OCT结构图像上的平均随机梯度下降来优化和计算它们的参数。此外,我们还引入了多级分辨率方法,以进一步提高我们提出的方法的鲁棒性和计算速度。在人体皮肤和眼睛的体内成像上测试了成像性能,并通过SNR进行了评估。峰值信噪比(PSNR)和归一化相关系数(NCC)。
    结果:本研究招募了5名受试者以获得皮肤和视网膜的体内图像。所提出的配准和平均方法在血管连通性和信噪比方面提供了成像性能的实质性改进。平均中重复体积数的增加改善了所有评估的指标,即,SNR,PSNR和NCC。在10次重复的体积平均之后,实现了SNR从10到40dB的改善。
    结论:所提出的3D配准和平均方法在减少斑点噪声和抑制运动伪影方面是有效的,从而提高SNR,最终平均图像的PSNR和NCC度量。预计所提出的算法将在更好的可视化和更可靠的体内OCT和OCTA数据的量化方面实用。这将有利于OCT的临床应用。
    BACKGROUND: In the clinical applications of optical coherence tomography angiography (OCTA), the repeated scanning and averaging method can provide better contrast with reduced speckle noises in the final results, which are useful for visualizing and quantifying vascular components with high accuracy, reproducibility, and reliability. However, the inevitable patient motion presents a challenge to this method. The objective of this study is to meet this challenge by introducing a 3D registration method to register optical coherence tomography (OCT)/OCTA scans for precise volume averaging of multiple scans to improve the signal-to-noise ratio (SNR) and increase quantification accuracy.
    METHODS: The proposed method utilized both rigid affine transformation and non-rigid B-spline transformation in which their parameters were optimized and calculated by the average stochastic gradient descent on OCT structural images. In addition, we also introduced a multi-level resolution approach to further improve the robustness and computational speed of our proposed method. The imaging performance was tested on in vivo imaging of human skin and eye and assessed by SNR, peak signal-to-noise ratio (PSNR) and normalized correlation coefficient (NCC).
    RESULTS: Five subjects were enrolled in this study for obtaining in vivo images of skin and retina. The proposed registration and averaging method provided substantial improvements of the imaging performance in terms of vessel connectivity and signal to noise ratio. The increase of repeated volume numbers in the averaging improves all the metrics assessed, i.e., SNR, PSNR and NCC. An improvement of the SNR from 10 to 40 dB after 10 repeated volumetric averaging was achieved.
    CONCLUSIONS: The proposed 3D registration and averaging method is effective in reducing speckle noises and suppressing motion artifacts, thereby improving SNR, PSNR and NCC metrics for final averaged images. It is expected that the proposed algorithm would be practically useful in better visualization and more reliable quantification of in vivo OCT and OCTA data, which would be beneficial to OCT clinical applications.
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