3-dimensional models

3 维模型
  • 文章类型: Journal Article
    背景:术后对准是全踝关节置换术(TAA)成功的最关键指标。踝关节旋转不良与聚乙烯磨损和内侧沟疼痛的风险增加有关。目前,对于测量胫骨和距骨组件在轴向平面中的旋转对齐的正确方法没有共识。在目前的研究中,术后分析系统采用负重计算机断层扫描和三维(3D)模型进行评估.该研究的目的是评估该系统的观察者之间和观察者之间的协议。
    方法:由两个评估者在两个单独的读数中独立地测量了四个角度:胫骨后部组件旋转角度(PTIRA),距骨后部旋转角度(PTARA),胫骨距骨部件轴向角(TTAM),和胫骨组件到第二跖骨角(TMRA)。协议分析根据类间系数进行量化。
    结果:对60名患者的60名TAA进行了评估。在测量PTIRA时,良好的观察者间协议和观察者内协议,PTARA,在测量TMRA角度时,观察到TTAM角度以及出色的观察者间一致性和观察者内一致性。
    结论:结论:当前基于3D模型的测量系统表现出良好的内部和内部一致性。根据这些结果,3D建模可以可靠地用于测量和评估TAA部件的轴向旋转。
    方法:3级回顾性研究。
    BACKGROUND: Post-operative alignment is the most critical indicator for a successful total ankle arthroplasty (TAA). Total ankle malrotation is associated with an increased risk for polyethylene wear and medial gutter pain. Currently, there is no consensus on the correct way to measure the alignment of the tibial and talar component rotations in the axial plane. In the current study, the post-operative analysis system was assessed using weight-bearing computer tomography and a three-dimensional (3D) model. The purpose of the study was to assess the inter-observer and intra-observer agreement of this system.
    METHODS: Four angles were measured by two raters independently in two separate readings: posterior tibial component rotation angle (PTIRA), posterior talar component rotation angle (PTARA), tibia talar component axial angle (TTAM), and tibial component to the second metatarsal angle (TMRA). Agreement analysis was quantified according to the interclass coefficient.
    RESULTS: Sixty TAAs across 60 patients were evaluated. A good inter-observer agreement and intra-observer agreement when measuring the PTIRA, PTARA, and TTAM angles was observed along with an excellent inter-observer agreement and intra-observer agreement when measuring the TMRA angle.
    CONCLUSIONS: In conclusion, the current 3D model-based measurement system demonstrates good to excellent inter and intra-agreement. According to these results, 3D modelling can be reliably used to measure and assess the axial rotation of TAA components.
    METHODS: Level 3 retrospective study.
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  • 文章类型: Journal Article
    短串联重复序列(STR)在遗传疾病中起着至关重要的作用。然而,经典的疾病模型,如近交小鼠,在公共领域缺乏这样的全基因组数据。对存在于蛋白质编码区中的STR等位基因(称为蛋白质串联重复或PTR)的检查可以提供表型规则的额外功能层。出于这个动机,我们分析了来自71个不同小鼠品系的全基因组测序数据,并鉴定了562个基因编码区内存在的STR等位基因。利用最近制定的蛋白质模型,我们还证明了这些等位基因在蛋白质三维空间中的存在,会影响蛋白质的折叠。总的来说,我们从大量小鼠品系中鉴定出了新的等位基因,并证明考虑到小鼠基因组中蛋白质结构的完整性和功能性,这些等位基因是令人感兴趣的.我们得出结论,PTR等位基因有可能通过影响蛋白质结构折叠和完整性来影响蛋白质功能。
    Short tandem repeats (STRs) play a crucial role in genetic diseases. However, classic disease models such as inbred mice lack such genome wide data in public domain. The examination of STR alleles present in the protein coding regions (are known as protein tandem repeats or PTR) can provide additional functional layer of phenotype regulars. Motivated with this, we analysed the whole genome sequencing data from 71 different mouse strains and identified STR alleles present within the coding regions of 562 genes. Taking advantage of recently formulated protein models, we also showed that the presence of these alleles within protein 3-dimensional space, could impact the protein folding. Overall, we identified novel alleles from a large number of mouse strains and demonstrated that these alleles are of interest considering protein structure integrity and functionality within the mouse genomes. We conclude that PTR alleles have potential to influence protein functions through impacting protein structural folding and integrity.
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  • 文章类型: Journal Article
    肾病性胱氨酸病是一种由CTNS基因破坏引起的罕见且严重的疾病。胱抑素病以溶酶体胱氨酸积累为特征,囊泡运输损害,氧化应激,和凋亡。此外,囊肿患者表现出肾单位近端管状节段的减弱和渗漏,在生命早期导致肾性范可尼综合征和肾衰竭。目前的体外膀胱囊肿模型无法概括该疾病的所有临床特征,这限制了其翻译价值。因此,小说的发展,复杂的体外模型可以更好地模拟疾病并表现出与二维细胞培养不相容的特征,这对于新疗法的开发至关重要。在这项研究中,我们通过在中空纤维膜(HFM)上培养有条件永生化的近端小管上皮细胞(ciPTEC),建立了肾病性膀胱炎的3维生物工程模型。囊肿性肾小管显示溶酶体胱氨酸积聚,自噬增加和囊泡运输恶化,几种代谢途径的损害,与对照肾小管相比,上皮单层紧密度的破坏。特别是,单层组织的丧失和渗漏可以通过使用囊肿性肾小管来模仿,这在以前是不可能的,使用标准的二维细胞培养。总的来说,生物工程制囊性肾小管在分子上更好地概括了肾病表型,结构,与二维细胞培养物相比,功能近端小管水平。
    Nephropathic cystinosis is a rare and severe disease caused by disruptions in the CTNS gene. Cystinosis is characterized by lysosomal cystine accumulation, vesicle trafficking impairment, oxidative stress, and apoptosis. Additionally, cystinotic patients exhibit weakening and leakage of the proximal tubular segment of the nephrons, leading to renal Fanconi syndrome and kidney failure early in life. Current in vitro cystinotic models cannot recapitulate all clinical features of the disease which limits their translational value. Therefore, the development of novel, complex in vitro models that better mimic the disease and exhibit characteristics not compatible with 2-dimensional cell culture is of crucial importance for novel therapies development. In this study, we developed a 3-dimensional bioengineered model of nephropathic cystinosis by culturing conditionally immortalized proximal tubule epithelial cells (ciPTECs) on hollow fiber membranes (HFM). Cystinotic kidney tubules showed lysosomal cystine accumulation, increased autophagy and vesicle trafficking deterioration, the impairment of several metabolic pathways, and the disruption of the epithelial monolayer tightness as compared to control kidney tubules. In particular, the loss of monolayer organization and leakage could be mimicked with the use of the cystinotic kidney tubules, which has not been possible before, using the standard 2-dimensional cell culture. Overall, bioengineered cystinotic kidney tubules recapitulate better the nephropathic phenotype at a molecular, structural, and functional proximal tubule level compared to 2-dimensional cell cultures.
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  • 文章类型: Journal Article
    近年来,在三维(3D)牙齿图像的使用中已经有了显著的扩展。在法医牙齿学领域,自动3D牙科识别系统可以增强识别过程。本研究提出了一种通过利用牙齿识别场景使用3D数字牙齿数据进行自动人类牙齿识别的新方法。总研究样本分为两组:A组(120个牙科模型)和B组(120个口腔内扫描-IOS)。A组数据由正畸治疗后患者的3D扫描牙齿模型(30个上颌和30个下颌)组成。该数据被认为是AM数字数据。要生成相同的样本,检索相同患者的牙模(60)并进行激光扫描。这些模型被认为是PM数字数据。B组数据(IOS)来自30名研究参与者。为了重建牙齿识别方案,从30名参与者中获得了30个上颌和30个下颌IOS,并将其视为IOS-AM。一年后,另一组IOS(60)来自相同参与者,被认为是IOS-PM.结果表明,AutoIDD(牙科数据自动识别)软件的准确性是一致的;能够通过3D图像叠加区分“正确匹配”(高匹配百分比)和“非匹配”(非常低的百分比)。上颌和下颌IOS的匹配百分比范围为64至100%和81-100%,平均距离(mm)分别为0.094和0.093。这项研究证明了通过新的自动化软件-数字取证中的AutoIDD使用3D扫描的可行性,以协助法医专家从可用的AM牙科记录中确认死者的身份。
    There has been a significant expansion in the use of 3-dimensional (3D) dental images in recent years. In the field of forensic odontology, an automated 3D dental identification system could enhance the identification process. This study presents a novel method for automated human dental identification using 3D digital dental data by utilising a dental identification scenario. The total study sample was divided into two groups: Group A (120 dental models) and Group B (120 Intra-oral scans-IOS). Group A data was composed of 3D scanned dental models of post-orthodontic treated patients (30 maxillary and 30 mandibular). This data was considered as AM digital data. To generate an identical sample, the dental casts (60) of the same patients were retrieved and laser scanned. These models were considered as PM digital data. Group B data (IOS) was obtained from 30 study participants. To reconstruct a dental identification scenario 30 maxillary and 30 mandibular IOS were obtained from 30 participants and were considered as IOS-AM. After one year, another set of IOS (60) were acquired from the same participants and were considered as IOS-PM. The results showed that the AutoIDD (Automated Identification from Dental Data) software was consistent in accuracy; capable of differentiating \"correct matches\" (high match percentage) from \"non-matches\" (very low percentage) by 3D image superimposition. The match percentage of the maxillary and mandibular IOS ranged from 64 to 100% and 81-100 %, with a mean distance (mm) of 0.094 and 0.093 respectively. This study demonstrated the feasibility of using 3D scans through a new automated software - AutoIDD in digital forensics to assist the forensic expert in confirming the identity of a deceased individual from the available AM dental records.
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