2,2,4-triamino-5(2H)-oxazolone (Oz)

  • 文章类型: Journal Article
    基因组——生命之源和进化平台——不断暴露于有害因素,细胞外和细胞内。它们的活动会导致不同类型的DNA损伤,到目前为止,已经确定了大约80种不同类型的病变。在本文中,研究了含有咪唑酮(Iz)或恶唑酮(Oz)和7,8-二氢-8-氧代-2'-脱氧鸟苷(OXOdG)的簇状DNA损伤位点对通过双螺旋的电荷转移及其电子性质的影响。为此,oligo-Iz的结构,d[A1Iz2A3OXOG4A5]*d[T5C4T3C2T1],和寡核苷酸-Oz,d[A1Oz2A3OXOG4A5]*d[T5C4T3C2T1],使用ONIOM方法在水相中的理论的M06-2X/6-D95**/M06-2X/sto-3G水平下进行了优化;所有讨论的能量均在理论的M06-2X/6-31G**水平下获得。考虑了非平衡和平衡的溶剂-溶质相互作用。发现以下结果:(A)在所有讨论的情况下,OXOdG显示出更高的自由基阳离子形成倾向,和B)朝向Iz和Oz的过量电子迁移是优选的。然而,在oligo-Oz的情况下,在垂直绝热阴离子弛豫过程中,注意到从Oz2到互补C4的电子转移,而对于oligo-Iz,它只固定在Iz2部分上。上述内容反映在电荷转移速率常数中,垂直/绝热电离电势,和电子亲和能量值,以及电荷和自旋分布。可以推测,CDLds-oligo结构中咪唑酮部分的形成及其向恶唑酮的转化可以显着影响电荷迁移过程,取决于C2碳杂交sp2或sp3。以上可以混淆单个DNA损伤识别和去除过程,导致诱变增加,并损害抗癌治疗的有效性。
    The genome-the source of life and platform of evolution-is continuously exposed to harmful factors, both extra- and intra-cellular. Their activity causes different types of DNA damage, with approximately 80 different types of lesions having been identified so far. In this paper, the influence of a clustered DNA damage site containing imidazolone (Iz) or oxazolone (Oz) and 7,8-dihydro-8-oxo-2\'-deoxyguanosine (OXOdG) on the charge transfer through the double helix as well as their electronic properties were investigated. To this end, the structures of oligo-Iz, d[A1Iz2A3OXOG4A5]*d[T5C4T3C2T1], and oligo-Oz, d[A1Oz2A3OXOG4A5]*d[T5C4T3C2T1], were optimized at the M06-2X/6-D95**//M06-2X/sto-3G level of theory in the aqueous phase using the ONIOM methodology; all the discussed energies were obtained at the M06-2X/6-31++G** level of theory. The non-equilibrated and equilibrated solvent-solute interactions were taken into consideration. The following results were found: (A) In all the discussed cases, OXOdG showed a higher predisposition to radical cation formation, and B) the excess electron migration toward Iz and Oz was preferred. However, in the case of oligo-Oz, the electron transfer from Oz2 to complementary C4 was noted during vertical to adiabatic anion relaxation, while for oligo-Iz, it was settled exclusively on the Iz2 moiety. The above was reflected in the charge transfer rate constant, vertical/adiabatic ionization potential, and electron affinity energy values, as well as the charge and spin distribution. It can be postulated that imidazolone moiety formation within the CDL ds-oligo structure and its conversion to oxazolone can significantly influence the charge migration process, depending on the C2 carbon hybridization sp2 or sp3. The above can confuse the single DNA damage recognition and removal processes, cause an increase in mutagenesis, and harm the effectiveness of anticancer therapy.
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  • 文章类型: Journal Article
    鸟嘌呤是四种DNA碱基中最容易被氧化的,和鸟嘌呤氧化产物通过DNA复制引起G:C-T:A和G:C-C:G转化。8-氧代-7,8-二氢鸟嘌呤(8-oxoG)引起G:C-T:A转化,而不是G:C-C:G转化,比鸟嘌呤更容易被氧化。这篇综述涵盖了四个主要发现。(i)2,2,4-三氨基-5(2H)-恶唑酮(Oz)由鸟嘌呤和8-氧代G在各种氧化条件下产生。鸟嘌呤通过DNA聚合酶掺入Oz对面,除了REV1。(ii)几种酶对Oz表现出切口活性。(iii)由于GG的氧化还原电位低于G的氧化还原电位,连续的GG序列比单个鸟嘌呤更容易被单电子氧化剂氧化,和OzOz由GG在双链DNA中产生。不像大多数DNA聚合酶,DNA聚合酶ζ有效地将引物延伸到整个OzOz的全长。(iv)在四链体DNA中,3'-鸟嘌呤主要被四链体DNA中的单电子氧化损伤,这种损害取决于最高占据分子轨道(HOMO)。四链体DNA中的氧化产物不同于单链或双链DNA中的氧化产物。
    Guanine is the most readily oxidized of the four DNA bases, and guanine oxidation products cause G:C-T:A and G:C-C:G transversions through DNA replication. 8-Oxo-7,8-dihydroguanine (8-oxoG) causes G:C-T:A transversions but not G:C-C:G transversions, and is more readily oxidized than guanine. This review covers four major findings. (i) 2,2,4-Triamino-5(2H)-oxazolone (Oz) is produced from guanine and 8-oxoG under various oxidative conditions. Guanine is incorporated opposite Oz by DNA polymerases, except REV1. (ii) Several enzymes exhibit incision activity towards Oz. (iii) Since the redox potential of GG is lower than that of G, contiguous GG sequences are more readily oxidized by a one-electron oxidant than a single guanine, and OzOz is produced from GG in double-stranded DNA. Unlike most DNA polymerases, DNA polymerase ζ efficiently extends the primer up to full-length across OzOz. (iv) In quadruplex DNA, 3\'-guanine is mainly damaged by one-electron oxidation in quadruplex DNA, and this damage depends on the highest occupied molecular orbital (HOMO). The oxidation products in quadruplex DNA are different from those in single-stranded or double-stranded DNA.
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