mycobacterium abscessus

脓肿分枝杆菌
  • 文章类型: Journal Article
    脓肿分枝杆菌日益增加的临床意义归因于其先天的高水平,对抗生素的广谱抗性,因此作为一种重要的人类病原体迅速进化。这保证了用于帮助发现治疗脓肿分枝杆菌感染的新药物或药物组合的新靶标的鉴定。这项研究受到MAB_1915中具有转座子插入的突变脓肿分枝杆菌(U14)的药物超敏反应谱的启发。我们通过在MAB_1915中构建无选择标记的框内缺失,并用相同或扩展版本的基因补充突变体,然后进行药物敏感性测试,验证了MAB_1915在脓肿分枝杆菌固有耐药性中的作用。根据MAB_1915的假定功能,通过溴化乙锭积累试验和对染料和洗涤剂的敏感性测试研究了细胞包膜的渗透性。在这项研究中,我们建立了MAB_1915在利福平的内在抗性中的作用的遗传证据,rifabutin,利奈唑胺,克拉霉素,万古霉素,还有bedaquiline.还观察到MAB_1915的破坏导致脓肿分枝杆菌中细胞包膜通透性的显著增加。观察到抗性的恢复取决于MAB_1915的编码DNA序列上游的至少27个碱基对。因此,MAB_1915可能与细胞包膜通透性相关,因此,它在脓肿分枝杆菌对多种药物的内在耐药性中的作用,这表明它作为一个新的目标,为未来开发有效的抗菌药物,以克服固有的耐药在脓肿。
    目的:本研究报告了推定的fadD(MAB_1915)在脓肿分枝杆菌对多种药物的先天耐药性中的作用,因此确定MAB_1915为有价值的靶标,并为进一步的机理研究和开发有效的抗微生物剂提供基线,以检查该病原体的高水平内在抗性。
    The increasing clinical significance of Mycobacterium abscessus is owed to its innate high-level, broad-spectrum resistance to antibiotics and therefore rapidly evolves as an important human pathogen. This warrants the identification of novel targets for aiding the discovery of new drugs or drug combinations to treat M. abscessus infections. This study is inspired by the drug-hypersensitive profile of a mutant M. abscessus (U14) with transposon insertion in MAB_1915. We validated the role of MAB_1915 in intrinsic drug resistance in M. abscessus by constructing a selectable marker-free in-frame deletion in MAB_1915 and complementing the mutant with the same or extended version of the gene and then followed by drug susceptibility testing. Judging by the putative function of MAB_1915, cell envelope permeability was studied by ethidium bromide accumulation assay and susceptibility testing against dyes and detergents. In this study, we established genetic evidence of the role of MAB_1915 in intrinsic resistance to rifampicin, rifabutin, linezolid, clarithromycin, vancomycin, and bedaquiline. Disruption of MAB_1915 has also been observed to cause a significant increase in cell envelope permeability in M. abscessus. Restoration of resistance is observed to depend on at least 27 base pairs upstream of the coding DNA sequence of MAB_1915. MAB_1915 could therefore be associated with cell envelope permeability, and hence its role in intrinsic resistance to multiple drugs in M. abscessus, which presents it as a novel target for future development of effective antimicrobials to overcome intrinsic drug resistance in M. abscessus.
    OBJECTIVE: This study reports the role of a putative fadD (MAB_1915) in innate resistance to multiple drugs by M. abscessus, hence identifying MAB_1915 as a valuable target and providing a baseline for further mechanistic studies and development of effective antimicrobials to check the high level of intrinsic resistance in this pathogen.
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  • 文章类型: Journal Article
    Introduction.脓肿分枝杆菌(MABS)是一种可引起严重肺部感染的致病菌,特别是在患有囊性纤维化的个体中。MABS菌落可以表现出光滑(S)或粗糙(R)形态,受其表面是否存在糖肽脂(GPL)的影响,分别。尽管这些形态类型具有临床意义,GPL水平之间的关系,形态类型和MABS感染的发病机制仍然知之甚少。差距声明。临床MABS感染中GPL产生和形态类型的机制和意义尚不清楚。在理解它们与传染性和致病性的相关性方面存在差距,特别是在患有潜在肺部疾病的患者中。瞄准.本研究的目的是探讨MABS形态学之间的相关性,通过分析囊性纤维化患者痰标本的菌株,GPL和传染性。方法论。MABS从患者痰液样本中分离出来,并按形态分类,巨噬细胞中的GPL谱和复制率。使用THP-1细胞的高含量离体感染模型评估了临床和实验室菌株的感染性。结果。我们的发现表明,大约50%的分离株表现出混合形态。GPL分析证实了GPL含量与形态类型之间的一致关系,仅在光滑分离株中发现。在形态类型组中,在体外没有观察到差异,然而在THP-1感染模型中观察到临床R菌株以更高的水平复制.此外,在感染后72小时,临床R株中感染的巨噬细胞比例明显高于S株.与实验室菌株相比,临床变体也以显着更高的速率感染THP-1细胞,强调实验室菌株感染数据对临床环境的可翻译性有限。结论。我们的研究证实了光滑菌株中形态型和GPL水平之间的一般相关性,但揭示了形态型组中比以前认识到的更多的变异性,特别是在细胞内感染期间。由于R形态型是临床上最关注的问题,这些发现有助于扩大围绕MABS感染的知识库,提供可以指导诊断方法和治疗方法的见解。
    Introduction. Mycobacterium abscessus (MABS) is a pathogenic bacterium that can cause severe lung infections, particularly in individuals with cystic fibrosis. MABS colonies can exhibit either a smooth (S) or rough (R) morphotype, influenced by the presence or absence of glycopeptidolipids (GPLs) on their surface, respectively. Despite the clinical significance of these morphotypes, the relationship between GPL levels, morphotype and the pathogenesis of MABS infections remains poorly understood.Gap statement. The mechanisms and implications of GPL production and morphotypes in clinical MABS infections are unclear. There is a gap in understanding their correlation with infectivity and pathogenicity, particularly in patients with underlying lung disease.Aim. This study aimed to investigate the correlation between MABS morphology, GPL and infectivity by analysing strains from cystic fibrosis patients\' sputum samples.Methodology. MABS was isolated from patient sputum samples and categorized by morphotype, GPL profile and replication rate in macrophages. A high-content ex vivo infection model using THP-1 cells assessed the infectivity of both clinical and laboratory strains.Results. Our findings revealed that around 50 % of isolates displayed mixed morphologies. GPL analysis confirmed a consistent relationship between GPL content and morphotype that was only found in smooth isolates. Across morphotype groups, no differences were observed in vitro, yet clinical R strains were observed to replicate at higher levels in the THP-1 infection model. Moreover, the proportion of infected macrophages was notably higher among clinical R strains compared to their S counterparts at 72 h post-infection. Clinical variants also infected THP-1 cells at significantly higher rates compared to laboratory strains, highlighting the limited translatability of lab strain infection data to clinical contexts.Conclusion. Our study confirmed the general correlation between morphotype and GPL levels in smooth strains yet unveiled more variability within morphotype groups than previously recognized, particularly during intracellular infection. As the R morphotype is the highest clinical concern, these findings contribute to the expanding knowledge base surrounding MABS infections, offering insights that can steer diagnostic methodologies and treatment approaches.
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  • 文章类型: Case Reports
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  • 文章类型: Journal Article
    为了调查脓肿分枝杆菌复合体(MABC)的患病率,耐药特性,重庆地区克拉霉素(CLA)易感性与MABC基因型的关系,中国。
    在2018年10月至2019年10月之间共收集了434株NTM患者分离株。测试了被证实为非结核分枝杆菌(NTM)的分离株的最低抑菌浓度的抗微生物剂。此外,rrl和erm(41)基因序列用于分析获得的大环内酯抗性和诱导型大环内酯抗性。
    总的来说,检测到17种不同的NTM物种,其中M.脓肿(22.6%,91/403)是最普遍的。阿米卡星,CLA,阿奇霉素和头孢西丁对MABC生物表现出有效的活性,但脓肿分枝杆菌和马氏分枝杆菌的耐药率差异无统计学意义(P>0.05)。在文化的第三天,对CLA的获得性耐药率为7.4%(9/121)。在41株具有诱导型CLA抗性的MABC分离株中,95.1%(39/41)的分离株属于erm(41)T28序列,而其余4.9%(2/41)具有M.massiliense基因型。所有erm(41)C28序列分离株在培养的第3天和第14天对CLA敏感。同时,在具有获得性抗性的5erm(41)T28分离株中,都拥有rrl2058/2059突变,包括3个A2058C突变的分离株和2个A2059G突变的分离株。而具有获得性抗性的4个M.massiliense分离株中的2个具有A2059G突变,一个分离株具有A2058G突变。
    Erm(41)和rrl基因可作为预测MABC复合分离株大环内酯敏感性的有用标记。
    UNASSIGNED: To investigate the prevalence of Mycobacterium abscessus complex (MABC), drug resistance characteristics, and the relationship between clarithromycin (CLA) susceptibility and MABC genotype in Chongqing, China.
    UNASSIGNED: A total of 434 NTM patient isolates were collected between October 2018 and October 2019. Isolates confirmed to be non-tuberculous mycobacteria (NTM) were tested for minimal inhibitory concentrations of antimicrobial agents. In addition, rrl and erm(41) gene sequences were used to analyze the acquired macrolide resistance and inducible macrolide resistance.
    UNASSIGNED: Overall, 17 different NTM species were detected, of which M. abscessus (22.6 %, 91/403) was most prevalent. Amikacin, CLA, azithromycin and cefoxitin exhibited potent activities against MABC organisms, but no significant differences were observed in drug resistance rates between M. abscessus and M. massiliense (P > 0.05). On day 3 of culture, the acquired resistance rate against CLA was 7.4 % (9/121). Of 41 MABC isolates with inducible CLA resistant, 95.1 % (39/41) isolates belonged to the erm(41) T28 sequevar, while the remaining 4.9 % (2/41) possessed the M. massiliense genotype. All erm(41) C28 sequevar isolates were sensitive to CLA on day3 and day 14 of culture. Meanwhile, of the 5 erm(41) T28 isolates with acquired resistance, all possessed rrl 2058/2059 mutations, including 3 isolates with A2058C mutation and 2 isolates with A2059G mutation. While 2 of the 4 M. massiliense isolates with acquired resistance possessed the A2059G mutation, and one isolate possessed the A2058G mutation.
    UNASSIGNED: Erm(41) and rrl gene could serve as useful markers for predicting macrolide susceptibility of MABC complex isolates.
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  • 文章类型: Journal Article
    这项研究评估了异帕米星(ISP)组合对脓肿分枝杆菌(MABS)的抗菌效力。从临床样品中分离出34个临床MABS菌株。其中,11例(32.4%)为脓肿分枝杆菌。脓肿(Mab),22例(64.7%)为脓肿分枝杆菌。massiliense(mma),其中一个(2.9%)是脓肿分枝杆菌。bolletii(Mbo)。我们比较了西他沙星(STFX)-ISP和克拉霉素(CLR)-ISP组合与单独使用抗菌药物的敏感性,当用STFX-ISP和CLR-ISP处理时,观察到了41.2%和17.6%的协同作用。通过层次聚类分析,分离株分为治疗敏感组和治疗耐药组。非Mma或粗糙菌落分离株很可能属于治疗敏感组(分别为p=0.024,p<0.001)。这些结果表明,含ISP的组合可能是MABS的新治疗策略,特别是在非MMA的情况下:治疗难治性亚种,和粗糙形态型:高毒力形态型。
    This study evaluated the antimicrobial potency of the combination of isepamicin (ISP) for Mycobacterium abscessus species (MABS). 34 clinical MABS strains were isolated from clinical samples. Of them, 11 (32.4 %) were M. abscessus subsp. abscessus (Mab), 22 (64.7 %) were M. abscessus subsp. massiliense (Mma), and one (2.9 %) was M. abscessus subsp. bolletii (Mbo). We compared susceptibility to sitafloxacin (STFX)-ISP and clarithromycin (CLR)-ISP combinations with those of the antimicrobial agents alone, and synergistic effects were observed in 41.2 % and 17.6 % when treated with STFX-ISP and CLR-ISP. By hierarchical cluster analysis, the isolates divided into treatment-sensitive and treatment-resistant groups. Non-Mma or rough colony isolates were significantly likely to belong to the treatment-sensitive group (p = 0.024, p < 0.001, respectively). These results suggest that the ISP-containing combination could be a new therapeutic strategy for MABS, especially in cases of non-Mma: treatment-refractory subspecies, and rough morphotypes: high-virulence morphotypes.
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  • 文章类型: English Abstract
    The Mycobacterium chelonae species and the M. avium and M. abscessus complexes are emerging pathogens that cause mycobacteriosis. Treatment depends on the species and subspecies identified. The drugs of choice are macrolides and aminoglycosides. However, due to the resistance identified to these drugs, determining the microbe’s sensitivity profile will allow clinicians to improve the understanding of the prognosis and evolution of these pathologies.
    To describe the macrolide and aminoglycoside susceptibility profile of cultures identified by Colombia’s Laboratorio Nacional de Referencia de Mycobacteria from 2018 to 2022, as Mycobacterium avium complex, M. abscessus complex, and M. chelonae. Materials and methods. This descriptive study exposes the susceptibility profile to macrolides and aminoglycosides of cultures identified as M. avium complex, M. abscessus complex, and M. chelonae using the GenoType® NTM-DR method.
    This descriptive study exposes the susceptibility profile to macrolides and aminoglycosides of cultures identified as M. avium complex, M. abscessus complex, and M. chelonae using the GenoType® NTM-DR method.
    We identified 159 (47.3 %) cultures as M. avium complex, of which 154 (96.9 %) were sensitive to macrolides, and 5 (3.1 %) were resistant; all were sensitive to aminoglycosides. From the 125 (37.2 %) cultures identified as M. abscessus complex, 68 (54.4 %) were sensitive to macrolides, 57 (45.6 %) were resistant to aminoglycosides, and just one (0.8 %) showed resistance to aminoglycosides. The 52 cultures (15.5 %) identified as M. chelonae were sensitive to macrolides and aminoglycosides.
    The three studied species of mycobacteria have the least resistance to Amikacin. Subspecies identification and their susceptibility profiles allow the establishment of appropriate treatment schemes, especially against M. abscessus.
    Introducción. Mycobacterium chelonae y los complejos Mycobacterium avium y M. abscessus, son agentes patógenos emergentes causantes de micobacteriosis. El tratamiento de esta infección depende de la especie y la subespecie identificadas. Los fármacos de elección son los macrólidos y aminoglucósidos, contra los cuales se ha reportado resistencia; por esta razón, el determinar el perfil de sensibilidad le permite al médico tratante comprender mejor el pronóstico y la evolución de estas infecciones. Objetivo. Describir los perfiles de sensibilidad ante macrólidos y aminoglucósidos, de los cultivos identificados como complejo Mycobacterium avium, complejo M. abscessus o especie M. chelonae, en el Laboratorio Nacional de Referencia de Micobacterias durante los años 2018 a 2022. Materiales y métodos. Se llevó a cabo un estudio descriptivo del perfil de sensibilidad a macrólidos y aminoglucósidos, de los cultivos identificados como complejo M. avium, complejo M. abscessus o M. chelonae, mediante la metodología GenoType® NTM-DR. Resultados. Los cultivos del complejo M. avium fueron 159 (47,3 %), de los cuales, 154 (96,9 %) fueron sensibles y 5 (3,1 %) resistentes a los macrólidos; todos fueron sensibles a los aminoglucósidos. Del complejo M. abscessus se estudiaron 125 (37,2 %) cultivos, 68 (54,4 %) resultaron sensibles y 57 (45,6 %) resistentes a los macrólidos; solo un cultivo (0,8 %) fue resistente a los aminoglucósidos. De M. chelonae se analizaron 52 cultivos (15,5 %), todos sensibles a los macrólidos y aminoglucósidos. Conclusiones. En las tres especies de micobacterias estudiadas, la resistencia contra la amikacina fue la menos frecuente. La identificación de las subespecies y los perfiles de sensibilidad permiten instaurar esquemas de tratamiento adecuados, especialmente en las micobacteriosis causadas por M. abscessus.
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  • 文章类型: Journal Article
    目的:在全球范围内,囊性纤维化和慢性阻塞性肺疾病患者的肺部感染率正在上升。脓肿分枝杆菌与这些人群的慢性肺部恶化有关。脓肿分枝杆菌对大多数常规抗生素的内在抗性危及治疗成功率。迄今为止,尚未开发出专门针对脓肿分枝杆菌的单一药物。我们的目标是表征吡啶硫酮核心药物样小分子,称为VOMG,是一种针对脓肿分枝杆菌和其他病原体具有活性的新化合物。
    方法:我们使用了多学科方法,包括微生物学,化学,生化和转录组学程序,以验证VOMG作为一种有前途的抗M。脓肿候选药物。
    结果:我们首次报道了VOMG对脓肿分枝杆菌和其他病原体的体外和体内杀菌活性。除了对脓肿分枝杆菌生物膜有活性,该化合物表现出良好的药理学(ADME-Tox)特征.抗性研究的频率无法分离抗性突变体。VOMG抑制细胞分裂,特别是FtsZ酶。
    结论:VOMG是针对脓肿分枝杆菌发现的抑制细胞分裂的新型药物样分子,对其他微生物病原体具有广谱活性。
    OBJECTIVE: The incidence of lung infections is increasing worldwide in individuals suffering from cystic fibrosis and chronic obstructive pulmonary diseases. Mycobacterium abscessus is associated to chronic lung deterioration in these populations. The intrinsic resistance of M. abscessus to most conventional antibiotics jeopardizes treatment success rates. To date no single drug has been developed targeting specifically M. abscessus. Our objective was to characterize the pyrithione-core drug-like small molecule named VOMG as a new compound active against M. abscessus and other pathogens.
    METHODS: We used a multidisciplinary approach including microbiological, chemical, biochemical and transcriptomics procedures to validate VOMG as a promising anti-M. abscessus drug candidate.
    RESULTS: We report for the first time the in vitro and in vivo bactericidal activity of VOMG against M. abscessus and other pathogens. Besides being active against M. abscessus biofilm, the compound showed a favourable pharmacology (ADME-Tox) profile. Frequency of resistance studies were unable to isolate resistant mutants. VOMG inhibits cell division, particularly the FtsZ enzyme.
    CONCLUSIONS: VOMG is a new drug-like molecule discovered against M. abscessus inhibiting cell division with broad spectrum activity against other microbial pathogens.
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  • 文章类型: Journal Article
    发现了新的基于2-吡咯并苯并噻唑的分枝杆菌DNA促旋酶抑制剂。其中,化合物49和51对结核分枝杆菌和脓肿分枝杆菌显示出优异的抗菌活性,对分枝杆菌具有显著的偏好。两种化合物都可以穿透感染的巨噬细胞并减少细胞内结核分枝杆菌负荷。化合物51是DNA促旋酶的有效抑制剂(M.结核DNA促旋酶IC50=4.1nM,大肠杆菌DNA促旋酶IC50<10nM),对细菌拓扑异构酶具有选择性。它显示低MIC90值(M.结核:0.63μM;脓肿分枝杆菌:2.5μM),显示对分枝杆菌的特异性,没有明显的毒性。化合物49不仅显示出有效的抗分枝杆菌活性(结核分枝杆菌的MIC90值为2.5μM,脓肿分枝杆菌为0.63μM)和对分枝杆菌的选择性,而且还显示出有利的溶解度(动力学溶解度=55μM)和血浆蛋白结合(人的未结合分数为2.9%,小鼠的未结合分数为4.7%)。这些发现强调了微调分子特性以开发特异性靶向分枝杆菌化学空间的DNA促旋酶B抑制剂的潜力。降低非靶标病原体产生耐药性的风险,并将对微生物组的伤害降至最低。
    New 2-pyrrolamidobenzothiazole-based inhibitors of mycobacterial DNA gyrase were discovered. Among these, compounds 49 and 51, show excellent antibacterial activity against Mycobacterium tuberculosis and Mycobacterium abscessus with a notable preference for mycobacteria. Both compounds can penetrate infected macrophages and reduce intracellular M. tuberculosis load. Compound 51 is a potent inhibitor of DNA gyrase (M. tuberculosis DNA gyrase IC50 = 4.1 nM, Escherichia coli DNA gyrase IC50 of <10 nM), selective for bacterial topoisomerases. It displays low MIC90 values (M. tuberculosis: 0.63 μM; M. abscessus: 2.5 μM), showing specificity for mycobacteria, and no apparent toxicity. Compound 49 not only displays potent antimycobacterial activity (MIC90 values of 2.5 μM for M. tuberculosis and 0.63 μM for M. abscessus) and selectivity for mycobacteria but also exhibits favorable solubility (kinetic solubility = 55 μM) and plasma protein binding (with a fraction unbound of 2.9 % for human and 4.7 % for mouse). These findings underscore the potential of fine-tuning molecular properties to develop DNA gyrase B inhibitors that specifically target the mycobacterial chemical space, mitigating the risk of resistance development in non-target pathogens and minimizing harm to the microbiome.
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  • 文章类型: Journal Article
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  • 文章类型: Journal Article
    抗生素的最小杀菌浓度(MBC)是药物根除细菌的效力的重要参数,也是候选药物在研究和开发中潜力的重要量度。我们已经建立了一种基于荧光的显微镜方法,用于测定针对非结核分枝杆菌脓肿分枝杆菌(分枝杆菌脓肿)的MBCs,以简化和加速MBC测定的性能,与计算琼脂上的菌落形成单位相比。用海藻糖偶联的染料3HC-2-Tre标记细菌并在96孔板中分析。新方法的结果与在琼脂上平板接种测定MBC的结果一致。该方法用于评价抗生素利福布汀的细菌性。莫西沙星,阿米卡星,克拉霉素和贝达奎林。观察到对脓肿分枝杆菌的杀菌作用,与文献数据一致。
    The minimum bactericidal concentration (MBC) of antibiotics is an important parameter for the potency of a drug in eradicating a bacterium as well as an important measure of the potential of a drug candidate in research and development. We have established a fluorescence-based microscopy method for the determination of MBCs against the non-tuberculous mycobacterium Mycobacterium abscessus (Mycobacteroides abscessus) to simplify and accelerate the performance of MBC determination compared to counting colony forming units on agar. Bacteria are labelled with the trehalose-coupled dye 3HC-2-Tre and analysed in a 96-well plate. The results of the new method are consistent with MBC determination by plating on agar. The method was used to evaluate the bactericidality of the antibiotics rifabutin, moxifloxacin, amikacin, clarithromycin and bedaquiline. Bactericidal effects against M. abscessus were observed, which are consistent with literature data.
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