mutualism

互惠主义
  • 文章类型: Journal Article
    虽然大多数开花植物与传粉者进行互动,Arisaema物种采用独特的,看似敌对的策略,通过监禁和导致传粉者在他们的巢穴中灭亡。最近的研究表明,Arisaemathunbergii主要依靠真菌gat,Leiaishitanii,有些人可能会在产卵后逃离女性的西班牙。我们调查了urashima与其授粉真菌gnats之间的相互作用,鉴于A.urashima与A.thunbergii密切相关。具体来说,我们测试了腐烂的urashima是否可以作为某些传粉者的育苗场所,以及这些传粉者是否可以逃脱看似致命的花卉陷阱。我们取回了A.urashimaspathes以及被困在spathes中的成年昆虫尸体,并孵化了spathes以查看是否出现了同种昆虫。此外,在实验室条件下,我们观察了横山猫的逃生行为,他们的下一代成年人最常出现在腐烂的菌种中。我们的发现表明,S.yokoyamai在使用花序作为苗圃时,在产卵后几乎总是从雌性spa逃脱。相比之下,urashima的其他授粉者,包括嗜酸性粒细胞。,仍然被困在火种中。这项研究表明,urashimaSpathes既可以作为致命的陷阱,也可以作为互助的托儿所,传粉者物种的结果不同。我们的结果还表明,某些传粉者对Arisaema繁殖的贡献被低估甚至被忽略,鉴于有关传粉媒介组合的信息是基于被困在花序中的花卉游客。
    While most flowering plants engage in mutualistic interactions with their pollinators, Arisaema species employ a unique, seemingly antagonistic strategy by imprisoning and causing the pollinators to perish within their spathes. Recent studies have revealed that Arisaema thunbergii primarily relies on a fungus gnat, Leia ishitanii, with some individuals possibly escaping female spathes after oviposition. We investigated interactions between A. urashima and its pollinating fungus gnats, given that A. urashima is closely related to A. thunbergii. Specifically, we tested whether decaying A. urashima serve as brood-sites for some pollinators and whether these pollinators can escape seemingly lethal floral traps. We retrieved A. urashima spathes together with adult insect corpses trapped within the spathes and incubated the spathes to see if conspecific insects emerged. In addition, under laboratory conditions, we observed the escape behaviour of Sciophila yokoyamai, whose next-generation adults most frequently emerge from the decaying spathes. Our findings indicate that S. yokoyamai almost always escapes from the female spathe after oviposition while using the inflorescence as a nursery. In contrast, other pollinators of A. urashima, including Mycetophila spp., remain trapped and perished within the spathes. This study demonstrates that A. urashima spathes can function both as lethal traps and mutualistic nurseries, with outcomes differing among pollinator species. Our results also suggest that the contribution of certain pollinators to Arisaema reproduction is underestimated or even neglected, given that information on their pollinator assemblages has been based on floral visitors trapped within the inflorescences.
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  • 文章类型: Journal Article
    当通过交叉饲喂从邻居获得生物合成前体的益处超过保留生物合成基因的成本时,在微生物群落中预期基因丢失。然而,基因成本主要来自表达,许多生物合成基因只在需要时表达。因此,相反,人们可以期望交叉喂食抑制生物合成基因表达,并通过降低基因成本来促进基因保留。在这里,我们检查了大肠杆菌和沼泽红假单胞菌的长期细菌共培养物,以寻找因非必需腺嘌呤的交叉饲喂而导致基因丢失或保留的证据。尽管R.palustris在长期培养中继续外化腺嘌呤,大肠杆菌没有积累嘌呤合成基因的突变,甚至在700代之后。大肠杆菌嘌呤合成基因在共培养中表达较低,这表明基因抑制消除了基因丢失的选择压力。为了支持这一解释,在共培养中,R.palustris也有低转录水平的铁清除铁载体基因,可能是因为大肠杆菌促进了帕鲁西氏菌的铁获取。R.palustris铁载体基因突变在长期共培养中相应地很少见,但在转录水平高的单一培养中很普遍。我们的数据表明,交叉喂养并不总是导致基因丢失,但是可以通过抑制昂贵的表达来促进基因保留。
    Gene loss is expected in microbial communities when the benefit of obtaining a biosynthetic precursor from a neighbor via cross-feeding outweighs the cost of retaining a biosynthetic gene. However, gene cost primarily comes from expression, and many biosynthetic genes are only expressed when needed. Thus, one can conversely expect cross-feeding to repress biosynthetic gene expression and promote gene retention by lowering gene cost. Here we examined long-term bacterial cocultures pairing Escherichia coli and Rhodopseudomonas palustris for evidence of gene loss or retention in response to cross-feeding of non-essential adenine. Although R. palustris continued to externalize adenine in long-term cultures, E. coli did not accumulate mutations in purine synthesis genes, even after 700 generations. E. coli purine synthesis gene expression was low in coculture, suggesting that gene repression removed selective pressure for gene loss. In support of this explanation, R. palustris also had low transcript levels for iron-scavenging siderophore genes in coculture, likely because E. coli facilitated iron acquisition by R. palustris. R. palustris siderophore gene mutations were correspondingly rare in long-term cocultures but were prevalent in monocultures where transcript levels were high. Our data suggests that cross-feeding does not always drive gene loss, but can instead promote gene retention by repressing costly expression.
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  • 文章类型: Journal Article
    授粉花消耗的共生体由于其稀有性而被认为是研究共同进化的示例性模型。视觉线索被认为在促进这些系统中花卉图案的进化中起着重要作用。我们从植物Wurfbainiavillosa中提出了一种新的专门授粉花消费共生关系,这是一种传统的中草药,被授粉的象鼻虫,Xenysmoderessp.
    在这项研究中,我们利用单色板进行二元选择测试,以确定象鼻虫的颜色偏好,进行了行为选择实验,使用轨迹球,拍摄鲜花和象鼻虫,并使用蓝色粘性板来吸引该领域的象鼻虫。
    在室内和室外野外系统中使用颜色优选的象鼻虫进行测试,并进行了验证实验。进行了行为测试,以调查视觉线索在W.villosa的传粉者吸引力中的作用,这是一种自兼容的昆虫授粉植物,主要依赖于Xenysmoderessp。象鼻虫因其特殊的妇科样结构而用于授粉。行为测试表明,蓝色波长为480nm和蓝色系统,和UV风格的花朵图案一样,特别是在labellum中具有特殊的类似妇科结构的部分,对雄性和雌性象鼻虫都有很大的吸引力。这些结果通过场蓝粘板捕集法得到进一步证实。
    这些发现表明W.villosa和Xenysmoderessp。象鼻虫是一种新的共生关系,涉及传粉者花的消费。此外,Wurfbainiavillosa花开发了特定的UV模式和特殊结构的视觉线索,在吸引传粉者中起着至关重要的作用。
    UNASSIGNED: Pollinating flower-consuming mutualisms are considered exemplary models for studying coevolution due to their rarity. Visual cues are considered to have a major role in facilitating the evolution of floral patterns in these systems. We present a new specialized pollinating flower-consuming mutualism from the plant Wurfbainia villosa, which is a traditional Chinese herbal medicine, by a pollinating weevil, Xenysmoderes sp.
    UNASSIGNED: In this study, We utilized monochrome plates for binary-choice tests to determine weevil color preferences, conducted behavioral choice experiments, using trackballs, photographed flowers and weevils, and employed blue sticky boards to attract weevils in the field.
    UNASSIGNED: Tests were conducted using colorpreferring weevils in both indoor and outdoor field systems, and validation experiments were performed. Behavioral tests were conducted to investigate the role of the visual cues in the pollinator attraction of W. villosa, which is a selfcompatible insect-pollinated plant that relies primarily on the Xenysmoderes sp. weevil for pollination due to its specialized gynandrium-like structure. Behavioral tests demonstrated that a blue color wavelength of 480 nm and the blue color system, as along with the UV-style pattern of the flowers, particularly the parts with specialized gynandrium-like structures in the labellum, were significantly attractive to both male and female weevils. These results were further confirmed through the field blue sticky board trap method.
    UNASSIGNED: These findings indicated that the interaction between W. villosa and Xenysmoderes sp. weevil was a novel symbiotic relationship involving pollinator flower consumption. Additionally, Wurfbainia villosa flowers developed specific visual cues of UV patterns and specialized structures that played a crucial role in attracting pollinators.
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  • 文章类型: Journal Article
    外生菌根真菌在不同的营养条件下采用不同的策略进行菌丝体生长和宿主定植。然而,与菌根相互作用相关的关键基因应仅受接种处理而不是营养变化的影响。为了利用微小的营养差异,快速筛选与藤黄杆菌和马尾松相互作用相关的关键基因,我们使用含有高营养和低营养培养基的培养瓶进行了接种实验。有趣的是,黄牛LS88促进了没有成熟外生菌根的马尾松幼苗的生长,LS88接种对马尾松根系的影响大于养分变化。在这项研究中,LS88菌株的重新测序基因组用于该菌株的转录组分析。分析表明,LS88中编码谷胱甘肽S-转移酶(GST)的独特基因可能参与定殖马尾松的根。在这项研究中,GST基因表达与营养水平无关。它可能是由马尾松假单胞菌诱导的,可以作为黄体链球菌定植程度的标志。
    Ectomycorrhizal fungi employ different strategies for mycelial growth and host colonization under varying nutrient conditions. However, key genes associated with mycorrhizal interaction should be influenced solely by the inoculation treatment and not by nutrient variations. To utilize subtle nutrient differences and rapidly screen for key genes related to the interaction between Suillus luteus and Pinus massoniana, we performed an inoculation experiment using culture bottles containing high- and low-nutrient media. Interestingly, S. luteus LS88 promoted the growth of P. massoniana seedlings without mature ectomycorrhiza, and the impact of LS88 inoculation on P. massoniana roots was greater than that of nutrient changes. In this study, the resequenced genome of the LS88 strain was utilized for transcriptome analysis of the strain. The analysis indicated that a unique gene encoding glutathione S-transferase (GST) in LS88 is likely involved in colonizing P. massoniana roots. In this study, the GST gene expression was independent of nutrient levels. It was probably induced by P. massoniana and could be used as a marker for S. luteus colonization degree.
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  • 文章类型: Journal Article
    生物相互作用,包括共生的,在生态和进化过程中起着至关重要的作用。肠道中的微生物共生体,被称为肠道微生物组,尤其重要,因为它们可以从根本上影响生活史,健身,以及主机的竞争力。野生动物肠道微生物的研究主要集中在脊椎动物,以及对物种丰富的无脊椎动物类群的研究,如地面甲虫,是稀疏的。事实上,甚至在物种丰富的Carabus属中,只研究了两种亚洲物种的肠道微生物组,而欧洲物种的结果完全缺失。这里,我们调查了广泛分布的欧洲Carabus物种的肠道细菌微生物组,通过下一代高通量测序靶向16S核糖体RNA基因的V3和V4区域。我们确定了分配给21个细菌门的1138个不同的操作分类单位,90个家庭,197属。降解碳水化合物的Prevotellaceae家族的成员,以前在地面甲虫中没有检测到,在食肉C.convexus的肠道微生物组中最丰富。大概,来自研究的野生种群的个体也消耗植物材料,尤其是水果,这些碳水化合物降解细菌共生体可以促进这些辅助食品的消费和消化。
    Biological interactions, including symbiotic ones, have vital roles in ecological and evolutionary processes. Microbial symbionts in the intestinal tracts, known as the gut microbiome, are especially important because they can fundamentally influence the life history, fitness, and competitiveness of their hosts. Studies on the gut-resident microorganisms of wild animals focus mainly on vertebrates, and studies on species-rich invertebrate taxa, such as ground beetles, are sparse. In fact, even among the species-rich genus Carabus, only the gut microbiome of two Asian species was studied, while results on European species are completely missing. Here, we investigated the gut bacterial microbiome of a widespread European Carabus species, targeting the V3 and V4 regions of the 16S ribosomal RNA genes by next-generation high-throughput sequencing. We identified 1138 different operational taxonomic units assigned to 21 bacterial phyla, 90 families, and 197 genera. Members of the carbohydrate-degrading Prevotellaceae family, previously not detected in ground beetles, were the most abundant in the gut microbiome of the carnivorous C. convexus. Presumably, individuals from the studied wild populations also consume plant materials, especially fruits, and these carbohydrate-degrading bacterial symbionts can facilitate both the consumption and the digestion of these supplementary foods.
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  • 文章类型: Journal Article
    随着土地资源约束的增加,湿地,作为生态热点,预计将加强生物地球化学过程,以减轻氮(N)污染,特别是硝酸盐氮(NO3--N)。然而,细菌之间的相互作用,藻类,和湿地中的大型植物,这对去除氮至关重要,基本上是未知的。这项研究探讨了大型植物覆盖率如何影响细菌-藻类相互作用,从互惠主义转向抑制,从而影响N的去除。中等覆盖度提高了NO3--N和总氮(TN)的去除(P<0.05),与微生物丰度增加相关(P<0.05)。这可能是由于适度的藻类光合作用,减少生理压力,以及微生物生态位的扩张。覆盖率不足促进藻类生长(叶绿素a>31.5μg·L-1),导致对底物的竞争加剧和pH升高,进一步抑制细菌活性。过度覆盖还通过降低光照和氧化还原电位来抑制细菌活性。因此,与中等覆盖率相比,不足和过度覆盖率使N去除效率降低了2.7-15.7%(NO3--N)和3.7-11.1%(TN),而甲烷排放潜力增加了1.4-6.9倍。这些发现为使用近自然方法解决NO3--N污染以及平衡小湿地的生态和实际考虑提供了见解。
    With increasing land resource constraints, wetlands, as ecological hotspots, are expected to enhance biogeochemical processes to mitigate nitrogen (N) pollution, particularly nitrate-nitrogen (NO3--N). However, the interactions among bacteria, algae, and macrophytes in wetlands, which are crucial for N removal, remain largely unknown. This study explored how macrophyte coverage influences bacterial-algal interactions, shifting from mutualism to inhibition, thereby affecting N removal. Moderate coverage enhanced NO3--N and total nitrogen (TN) removal (P < 0.05), which was correlated with increased microbial abundance (P < 0.05). This may have resulted from moderate algal photosynthesis, reduced physiological stress, and the expansion of ecological niches for microbes. Insufficient coverage promoted algal growth (chlorophyll-a > 31.8 μg·L-1), leading to increased competition for substrates and elevated pH, which further inhibited bacterial activity. Excessive coverage also inhibited bacterial activity by reducing illumination and oxidation-reduction potential. Consequently, insufficient and excessive coverage decreased N removal efficiencies by 2.7-15.7 % (NO3--N) and 3.7-11.1 % (TN) while increasing methane emission potential by 1.4-6.9 times compared with moderate coverage. These findings offer insights into solving NO3--N contamination using near-natural methods and balancing the ecological and practical considerations for small wetlands.
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  • 文章类型: Journal Article
    共同主义构成了各种各样的生态重要互动,然而,它们的生态和进化稳定性仍然是共同进化理论中争论的话题。最近的理论和经验工作表明,共同进化的军备竞赛可能参与了相互互动的维持,在产生夸大性状的同时,为相互作用的物种维持互利的结果。在这里,我们提出了一个基于个体的模型,该模型评估了异步生活史-也就是说,平均寿命不同的伴侣改变了性状共同进化的动态,所涉及物种的预期适应度结果,以及每个物种随时间的选择差异的动态。结果表明,寿命更长的互惠主义者将始终“失去”一个平衡的共同进化军备竞赛,与寿命较短的伴侣相比,平均特质值和健身结果都超过了。此外,随着生活史变得越来越异步,互惠特征上的线性选择差异变得越来越发散,寿命较长的物种经历持续的方向选择,寿命较短的物种经历较弱的方向选择,更不一致的选择。这些结果表明,异步生活史可以通过共同进化的军备竞赛使相互进化的相互作用的维持复杂化,并且当生活史充分分歧时,通过选择差异来检测共同进化可能很困难。
    AbstractMutualisms constitute a diverse class of ecologically important interactions, yet their ecological and evolutionary stability remain topics of debate in coevolutionary theory. Recent theoretical and empirical work has suggested that coevolutionary arms races may be involved in the maintenance of mutualistic interactions, sustaining mutually beneficial outcomes for interacting species while producing exaggerated traits. Here we present an individual-based model that evaluates how asynchronous life histories-that is, partners with different average lifespans-change the dynamics of trait coevolution, the expected fitness outcomes for species involved, and the dynamics of selection differentials across time for each species. Results indicate that a longer-lived mutualist will consistently \"lose\" an otherwise balanced coevolutionary arms race, being outpaced in both the mean trait value and fitness outcome compared with a shorter-lived partner. Furthermore, linear selection differentials on mutualistic traits become increasingly divergent as life histories become increasingly asynchronous, with the longer-lived species experiencing persistent directional selection and the shorter-lived species experiencing weaker, more inconsistent selection. These results suggest that asynchronous life histories can complicate the maintenance of mutualistic interactions via coevolutionary arms races and that detecting coevolution via selection differentials may be difficult when life histories are sufficiently divergent.
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  • 文章类型: Journal Article
    背景:植物之间的共生关系,根瘤菌,丛枝菌根真菌(AMF)是自然界中最著名的共生关系之一。然而,目前尚不清楚双边/三方共生在资源有限的条件和宿主的不同遗传背景下如何发挥作用。
    结果:使用全因子设计,我们操纵了绿豆种质/亚种,根瘤菌,和AMF来测试它们对彼此的影响。根瘤菌通过增加植物氮含量而发挥典型的促进作用,植物重量,叶绿素含量,AMF定殖。相比之下,AMF导致了植物的权衡(减少了生物量以获取磷),并在减少根瘤菌的适应性(根瘤重量)方面表现得很好。植物基因型对AMF适应性没有显著影响,但是不同的绿豆种质具有不同的根瘤菌亲和力。与以前的研究相比,在AMF的存在下,植物和根瘤菌适应性之间的正相关关系减弱,野生绿豆对根瘤菌的有益作用和AMF的减毒反应更敏感。
    结论:我们表明,这种复杂的三方关系并不能无条件地使所有各方受益。此外,根瘤菌种类和寄主遗传背景对共生关系有显著影响。这项研究为重新评估豆科植物与其共生伙伴之间的关系提供了新的机会。
    BACKGROUND: The symbiosis among plants, rhizobia, and arbuscular mycorrhizal fungi (AMF) is one of the most well-known symbiotic relationships in nature. However, it is still unclear how bilateral/tripartite symbiosis works under resource-limited conditions and the diverse genetic backgrounds of the host.
    RESULTS: Using a full factorial design, we manipulated mungbean accessions/subspecies, rhizobia, and AMF to test their effects on each other. Rhizobia functions as a typical facilitator by increasing plant nitrogen content, plant weight, chlorophyll content, and AMF colonization. In contrast, AMF resulted in a tradeoff in plants (reducing biomass for phosphorus acquisition) and behaved as a competitor in reducing rhizobia fitness (nodule weight). Plant genotype did not have a significant effect on AMF fitness, but different mungbean accessions had distinct rhizobia affinities. In contrast to previous studies, the positive relationship between plant and rhizobia fitness was attenuated in the presence of AMF, with wild mungbean being more responsive to the beneficial effect of rhizobia and attenuation by AMF.
    CONCLUSIONS: We showed that this complex tripartite relationship does not unconditionally benefit all parties. Moreover, rhizobia species and host genetic background affect the symbiotic relationship significantly. This study provides a new opportunity to re-evaluate the relationships between legume plants and their symbiotic partners.
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  • 文章类型: Journal Article
    热休克反应在针对各种生物体的病毒的免疫防御中起关键作用。对模式生物的研究表明,在病毒暴露之前诱导这种反应可以增强宿主对感染的抵抗力,而不足的反应会使个体更容易受到影响。此外,病毒依靠热休克反应的成分来维持自身的稳定性,病毒感染可以提高植物的耐热性,在极端条件下给予感染者优势,帮助病毒复制和传播。这里,我们研究了线虫秀丽隐杆线虫及其天然病原体奥赛病毒(OrV)在热应激下的相互作用。我们发现OrV感染导致热应激相关基因的差异表达,感染人群对热休克的抵抗力增强。这种抗性与argonautesalg-1和alg-2的表达增加有关,这对于热休克后的存活和OrV复制至关重要。总的来说,我们的研究表明线虫和OrV之间存在环境依赖的互惠关系,有可能扩大动物的生态位,并为病毒提供额外的复制和适应极端条件的机会。
    The heat-shock response plays a key role in the immune defence against viruses across various organisms. Studies on model organisms have shown that inducing this response prior to viral exposure enhances host resistance to infections, while deficient responses make individuals more susceptible. Moreover, viruses rely on components of the heat-shock response for their own stability and viral infections improve thermal tolerance in plants, giving infected individuals an advantage in extreme conditions, which aids the virus in replication and transmission. Here, we examine the interaction between the nematode Caenorhabditis elegans and its natural pathogen the Orsay virus (OrV) under heat stress. We found that OrV infection leads to differential expression of heat-stress-related genes, and infected populations show increased resistance to heat-shock. This resistance correlates with increased expression of argonautes alg-1 and alg-2, which are crucial for survival after heat-shock and for OrV replication. Overall, our study suggests an environmental-dependent mutualistic relationship between the nematode and OrV, potentially expanding the animal\'s ecological niche and providing the virus with extra opportunities for replication and adaptation to extreme conditions.
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  • 文章类型: Journal Article
    蓝细菌是全球存在的光合细菌,以其对初级生产和毒素生产的贡献而著称,这些毒素具有有害的生态系统影响。此外,蓝藻可以与不同的真核生物形成共生关系,包括陆地植物,水生浮游生物和真菌。然而,并非所有的蓝藻都在共生关联中发现,这表明共生蓝藻已经进化出促进宿主相互作用的专业化。光合能力,固氮,复杂生化物质的生产是宿主相关的蓝藻共生体提供的关键功能。探索额外的专业化是否与蓝藻的这种生活方式有关,我们对984个蓝细菌基因组中的分子功能和生物合成基因簇(BGC)进行了比较系统基因组学研究。具有宿主相关和共生生活方式的蓝细菌集中在念珠科,其中八个单系进化枝对应于特定的宿主分类群。与以前的研究一致,共生体很可能为它们的真核生物伙伴提供固定的氮,通过多种不同的固氮途径。此外,我们的分析确定了与特定宿主群相关的蓝细菌中的几丁质代谢途径,而专性共生体的BGC较少。密切相关的共生细菌和自由生活的蓝细菌之间的分子功能和BGC的保守性表明,与目前已知的相比,其他蓝细菌可能形成共生关系。
    Cyanobacteria are globally occurring photosynthetic bacteria notable for their contribution to primary production and production of toxins which have detrimental ecosystem impacts. Furthermore, cyanobacteria can form mutualistic symbiotic relationships with a diverse set of eukaryotes, including land plants, aquatic plankton and fungi. Nevertheless, not all cyanobacteria are found in symbiotic associations suggesting symbiotic cyanobacteria have evolved specializations that facilitate host-interactions. Photosynthetic capabilities, nitrogen fixation, and the production of complex biochemicals are key functions provided by host-associated cyanobacterial symbionts. To explore if additional specializations are associated with such lifestyles in cyanobacteria, we have conducted comparative phylogenomics of molecular functions and of biosynthetic gene clusters (BGCs) in 984 cyanobacterial genomes. Cyanobacteria with host-associated and symbiotic lifestyles were concentrated in the family Nostocaceae, where eight monophyletic clades correspond to specific host taxa. In agreement with previous studies, symbionts are likely to provide fixed nitrogen to their eukaryotic partners, through multiple different nitrogen fixation pathways. Additionally, our analyses identified chitin metabolising pathways in cyanobacteria associated with specific host groups, while obligate symbionts had fewer BGCs. The conservation of molecular functions and BGCs between closely related symbiotic and free-living cyanobacteria suggests the potential for additional cyanobacteria to form symbiotic relationships than is currently known.
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