colon adenocarcinoma

结肠腺癌
  • 文章类型: Journal Article
    结肠腺癌(COAD)代表了人群中的重大健康问题。推进我们对COAD的理解对于早期发现至关重要,实现个性化治疗干预,并促进制定有效的预防措施。凝血系统在肿瘤相关的病理过程中发挥作用;然而,其在COAD中的具体参与和潜在的贡献者仍不清楚。本研究旨在通过分析与COAD相关的凝血相关基因(CRGs),建立一种新的风险分层方法。通过对来自公共数据库的数据进行全面的生物信息学分析,我们筛选了COAD相关的CRGs并表征了相关的分子亚型。在综合分析各亚型的特点后,我们应用CRG亚型的差异表达基因建立了一种新的风险分层方法.临床亚组分析,免疫浸润分析,治疗反应性预测和其他分析方法提示了已建立的风险分层方法的潜在临床价值.作为选定的目标之一,体外实验证实了MS4A4A对COAD增殖和侵袭的影响,部分验证了生物信息学结果的可靠性。我们的发现描述了CRGs可能与COAD发病机制有关,并为凝血过程对肿瘤发生和进展的影响提供了新的见解。
    Colon adenocarcinoma (COAD) represents a significant health concern within the population. Advancing our understanding of COAD is imperative for early detection, enabling personalized treatment interventions, and facilitating the development of effective preventive measures. The coagulation system plays a role in tumor-related pathological processes; however, its specific involvement in COAD and potential contributors remain unclear. This study aimed to establish a novel risk stratification approach by analyzing coagulation related genes (CRGs) associated with COAD. Through a comprehensive bioinformatics analysis of data from public databases, we screened COAD associated CRGs and characterized the associated molecular subtypes. After a comprehensive analysis of the characteristics of each subtype, we applied differentially expressed genes in CRG subtypes to establish a new risk stratification method. Clinical subgroup analysis, immunoinfiltration analysis, therapeutic reactivity prediction and other analytical methods suggest the potential clinical value of the established risk stratification method. As one of the selected targets, the effect of MS4A4A on the proliferation and invasion of COAD was confirmed by in vitro experiments, which partially verified the reliability of bioinformatics results. Our findings delineate CRGs potentially implicated in COAD pathogenesis and offer fresh insights into the influence of the coagulation process on tumorigenesis and progression.
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  • 文章类型: Case Reports
    良性多囊性腹膜间皮瘤(BMPM)是一种罕见的疾病,其中患者有多个腹膜囊性病变。BMPM可以模拟粘液性癌病,因此可以造成诊断困境。我们介绍了一名76岁的女性,该女性被转诊为升结肠腺癌的治疗,在术前计算机断层扫描和诊断性腹腔镜检查中发现腹部和骨盆有多个非特异性囊性病变。冰冻切片分析提示病变含有“粘蛋白”。由于担心转移,右结肠切除术流产.腹腔镜活检的最终组织学分析显示间皮囊肿,与BMPM一致,与她的结肠腺癌无关.2周后行腹腔镜右结肠切除术。当偶然发现时,BMPM可以在已知内脏恶性肿瘤的患者中产生诊断和治疗不确定性。冻结截面分析可能无法准确区分两者,最终的组织学确认应在明确治疗之前寻求。
    Benign multicystic peritoneal mesothelioma (BMPM) is a rare condition, in which patients have multiple cystic lesions of the peritoneum. BMPM can mimic mucinous carcinomatosis and can thus create a diagnostic dilemma. We present the case of a 76-year-old woman who was referred for management of ascending colon adenocarcinoma and was noted to have several nonspecific cystic lesions in the abdomen and pelvis on preoperative computed tomography and diagnostic laparoscopy. Frozen section analysis suggested the lesions contained \'mucin\'. Due to concern for metastases, right colectomy was aborted. Final histologic analysis of the laparoscopic biopsies revealed mesothelial cysts, consistent with BMPM, unrelated to her colon adenocarcinoma. Laparoscopic right colectomy was performed 2 weeks later. BMPM can create diagnostic and therapeutic uncertainty in patients with known visceral malignancies when discovered incidentally. Frozen section analysis may not be accurate in differentiating the two, and final histologic confirmation should be sought prior to definitive treatment.
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  • 文章类型: Journal Article
    背景:作为结直肠癌最常见的亚型,结直肠腺癌(COAD)仍需更好的预后分层方法和新的干预目标。线粒体应激反应,与线粒体稳态和癌症代谢有关,需要进一步调查。
    方法:我们通过TCGA和GEO数据库鉴定了与COAD预后相关的线粒体氧化应激相关基因(MOS)。根据MOS基因标签鉴定分子亚型特征,并建立MOS评分系统,对其临床价值进行综合评价。此外,其中一个筛选基因的影响,NDRG1,通过一系列体外实验进行了研究,包括蛋白质印迹,qRT-PCR,CCK8测定,克隆形成,和Transwell分析,探讨其对COAD增殖和迁移能力的影响。
    结果:我们的分析表明,MOS基因特征有效地区分了COAD的分子亚型,发现MOS评分系统在预测预后方面是独立的。微环境渗透特性评价,突变特征,免疫治疗反应,药物敏感性分析进一步提示了本研究的潜在临床应用价值。体外实验结果表明,NDRG1显著影响COAD细胞的增殖和迁移,部分验证了我们生物信息学分析的可靠性。
    结论:这项研究为线粒体氧化应激在COAD中的作用提供了一个新的视角,提出创新的预后评估方法和潜在的治疗目标,从而为COAD的临床治疗提供新的方向。
    BACKGROUND: As the most common subtype of colorectal cancer, colorectal adenocarcinoma (COAD) still needs better prognostic stratification methods and new intervention targets. The mitochondrial stress response, linked to mitochondrial homeostasis and cancer metabolism, warrants further investigation.
    METHODS: We identified mitochondrial oxidative stress-related genes (MOS) associated with COAD prognosis through the TCGA and GEO databases. Molecular subtype characteristics were identified based on MOS gene signatures, and an MOS scoring system was established to comprehensively evaluate its clinical value. Additionally, the effect of one of the screened genes, NDRG1, was investigated through a series of in vitro experiments, including Western blot, qRT-PCR, CCK8 assay, clone formation, and Transwell assay, to explore its impact on COAD proliferation and migration ability.
    RESULTS: Our analysis revealed that MOS gene signatures effectively distinguished molecular subtypes of COAD, and the MOS scoring system was found to be independent in predicting prognosis. Evaluation of microenvironment infiltration characteristics, mutation characteristics, immunotherapy response, and drug sensitivity analysis further suggested the potential clinical utility of this study. in vitro experimental results showed that NDRG1 significantly affected the proliferation and migration of COAD cells, partially verifying the reliability of our bioinformatics analysis.
    CONCLUSIONS: This study provides a novel perspective on the role of mitochondrial oxidative stress in COAD, proposing innovative prognostic evaluation methods and potential therapeutic targets, thus offering new directions for the clinical treatment of COAD.
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  • 文章类型: Journal Article
    KIAA1429是N6-甲基腺嘌呤(m6A)修饰的重要作者,这与肿瘤进展有关。本研究旨在探讨KIAA1429在结肠腺癌(COAD)中的作用机制。构建KIAA1429沉默的COAD细胞和异种移植肿瘤模型,并通过一系列体内和体外试验探索了KIAA1429的功能。使用转录组测序探索KIAA1429的下游机制。二乙基二氧基甘氨酸(DMOG),HIF-1α的激活剂,用于反馈验证。KIAA1429在COAD肿瘤组织和细胞中的表达升高,KIAA1429在肿瘤的不同阶段表现出差异表达。沉默KIAA1429抑制增殖,迁移,以及HT29和HCT116细胞的侵袭。KIAA1429沉默的HT29细胞中NLRP3、GSDMD和Caspase-1的表达水平降低,表明焦转活性被抑制。此外,KIAA1429沉默抑制了肿瘤异种移植物的生长。转录组测序和逆转录定量聚合酶链反应显示,KIAA1429沉默后,AKR1C1,AKR1C2,AKR1C3和RDH8的表达升高,和VIRMA的表达,GINS1、VBP1和ARF3均降低。在HT29细胞中,KIAA1429沉默阻断了HIF-1信号通路,伴随AKT1和HIF-1α蛋白水平的降低。HIF-1信号通路的激活,由DMOG介导,逆转KIAA1429沉默的抗肿瘤作用。KIAA1429沉默通过阻断HIF-1信号通路抑制COAD发育。
    KIAA1429 is an important \'writer\' of the N6-methyladenine (m6A) modification, which is involved in tumour progression. This study was conducted to explore the mechanism of action of KIAA1429 in colon adenocarcinoma (COAD). KIAA1429-silenced COAD cell and xenograft tumour models were constructed, and the function of KIAA1429 was explored through a series of in vivo and in vitro assays. The downstream mechanisms of KIAA1429 were explored using transcriptome sequencing. Dimethyloxalylglycine (DMOG), an activator of HIF-1α, was used for feedback verification. The expression of KIAA1429 in COAD tumour tissues and cells was elevated, and KIAA1429 exhibited differential expression at different stages of the tumour. Silencing of KIAA1429 inhibited the proliferation, migration, and invasion of HT29 and HCT116 cells. The expression levels of NLRP3, GSDMD and Caspase-1 were decreased in KIAA1429-silenced HT29 cells, indicating the pyroptotic activity was inhibited. Additionally, KIAA1429 silencing inhibited the growth of tumour xenograft. Transcriptome sequencing and reverse transcription quantitative polymerase chain reaction revealed that after KIAA1429 silencing, the expression of AKR1C1, AKR1C2, AKR1C3 and RDH8 was elevated, and the expression of VIRMA, GINS1, VBP1 and ARF3 was decreased. In HT29 cells, KIAA1429 silencing blocked the HIF-1 signalling pathway, accompanied by the decrease in AKT1 and HIF-1α protein levels. The activation of HIF-1 signalling pathway, mediated by DMOG, reversed the antitumour role of KIAA1429 silencing. KIAA1429 silencing inhibits COAD development by blocking the HIF-1 signalling pathway.
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  • 文章类型: Journal Article
    目的/背景:这项研究试图建立凝血酶测量水平与结肠腺癌(COAD)发展风险之间的可能相关性。方法:凝血酶测量水平来自PietznerM(2020,PMID:33328453)的一项研究,并整合到IEU数据库中。COAD的数据来自FinnGen数据库(2021,C3_COLON_ADENO)。使用各种分析方法来评估这种关系,包括方差逆加权(IVW),孟德尔随机化-Egger(MR-Egger)回归,以及加权中位数和模式技术。进行了敏感性分析,包括Cochran的Q测试,MR-Egger截距测试,孟德尔随机化多效效应和异常值(MR-PRESSO),连同漏报分析,以确保结果的鲁棒性。结果:IVW分析表明,凝血酶水平升高与COAD风险之间存在显着负相关(比值比(OR)=0.76,95%CI=0.66-0.88,p=0.0003)。这些发现得到了加权中位数分析(OR=0.78,95%CI=0.68-0.90,p=0.0006)和加权模式分析(OR=0.78,95%CI=0.68-0.88,p=0.0017)的支持。结论:这项研究确定了凝血酶测量水平与COAD发生率之间的因果关系。提示较高的凝血酶水平与发生COAD的风险降低相关。
    Aims/Background: This investigation sought to establish a possible correlation between thrombin measurement levels and the risk of developing colon adenocarcinoma (COAD). Methods: Thrombin measurement levels were sourced from a study by Pietzner M (2020, PMID: 33328453) and integrated into the IEU database. Data on COAD were obtained from the FinnGen database (2021, C3_COLON_ADENO). Various analytical methods were used to assess the relationship, including inverse variance weighting (IVW), mendelian randomization-Egger (MR-Egger) regression, as well as weighted median and mode techniques. Sensitivity analyses were performed, including Cochran\'s Q test, MR-Egger intercept test, mendelian randomization Pleiotropy RESidual Sum and Outlier (MR-PRESSO), along with leave-one-out analysis, to ensure the robustness of the results. Results: The IVW analysis indicated a significant inverse association between elevated thrombin levels and the risk of COAD (odds ratio (OR) = 0.76, 95% CI = 0.66-0.88, p = 0.0003). These findings were supported by the weighted median analysis (OR = 0.78, 95% CI = 0.68-0.90, p = 0.0006) and the weighted mode analysis (OR = 0.78, 95% CI = 0.68-0.88, p = 0.0017). Conclusion: This research identified an inverse causal relationship between thrombin measurement levels and the incidence of COAD, suggesting that higher thrombin levels are associated with a reduced risk of developing COAD.
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  • 文章类型: Case Reports
    结肠腺癌(COAD)是一种恶性肿瘤类型。发热是COAD术后最常见的并发症。本研究描述了早期COAD合并癌前结肠息肉的患者的治疗方法以及术后发热的可能原因。病人是一名48岁的女性,患有间歇性便血,排便紧迫性和液体粪便。病人接受了手术治疗,从肠道中取出了一整段,其中包含一个4厘米长的肿块和一个2厘米长的坚固肿块。手术后3天内,病人的切口愈合良好,但体温升高到37.8-38.6℃。在术后第10天移除缝合线。又过了三天,发现患者手术切口的上端裂开至腹直肌前鞘。向患者提供重组人酸性成纤维细胞生长因子以促进伤口愈合。根据病理检查结果最终诊断为直肠乙状结肠交界处腺癌及癌前结肠息肉。患者给予贝伐单抗静脉注射联合盐酸伊立替康和口服卡培他滨,所有的药物每3周反复使用,共使用4个治疗周期。这种术后发热的原因被认为是慢性便血引起的贫血,并伴有深度伤口裂开和继发感染。本研究表明,低剂量和短期预防性辅助治疗对于早期COAD合并癌前结肠息肉是可行的。
    Colon adenocarcinoma (COAD) is a malignant tumor type. Fever is the most common postoperative complication of COAD. The present study described the treatment of a patient with early-stage COAD with precancerous colon polyps and the possible cause of postoperative fever. The patient was a 48-year-old woman with intermittent hematochezia, defecation urgency and liquid feces. The patient received surgical treatment, a whole segment from the intestine was removed, which contained a 4-cm-long mass and a 2-cm-long firm mass. Within 3 days after the operation, the patient\'s incision healed well, but the body temperature increased to a range of 37.8-38.6°C. The suture was removed on the 10th postoperative day. After another three days, it was discovered that the upper end of the patient\'s surgical incision split to the anterior rectus abdominis sheath. The patient was provided with recombinant human acidic fibroblast growth factor to promote wound healing. The patient was finally diagnosed with rectosigmoid junction adenocarcinoma and precancerous colon polyps according to pathological examination results. The patient was given intravenous bevacizumab combined with irinotecan hydrochloride and oral capecitabine, and all drugs were repeatedly applied every 3 weeks, and a total of four treatment cycles were used. The cause of this postoperative fever was concluded to be anemia coming from chronic hematochezia and combined with deep wound dehiscence with secondary infection. The present study showcased that low-dose and short-course prophylactic adjuvant therapy is feasible for early-stage COAD with precancerous colon polyps.
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  • 文章类型: Journal Article
    背景:手术后病理指导辅助治疗是结肠癌的标准治疗方法。来自FOxTROT临床试验的数据显示,在T3/T4患者中,6周新辅助化疗(NACT)的潜在益处。本研究评估了一个全国可切除结肠癌患者队列中新辅助治疗的实际结果。
    方法:169,120例临床I期患者,II,纳入了国家癌症数据库注册表中的III期结肠癌。患者被归类为接受新辅助治疗后手术(NACT),手术,然后辅助化疗(AC),或者单独手术。评估与治疗顺序和结果相关的因素。
    结果:在确定的患者中,1.4%获得NACT,包括第一阶段的0.5%,第二阶段的1.8%,和第三阶段的3.0%。对于第一阶段,AC后5年总生存率(OS)为74.7%,NACT后62.2%,SA后76.4%。对于第二阶段,AC后的5-yOS为73.2%,NACT后66.8%,SA后为64.3%。对于第三阶段,AC后的5-yOS为67.3%,NACT后67.7%,SA后为42.4%。Cox比例风险模型表明,在临床阶段I(风险比[HR]=1.59,95%置信区间[CI]1.39-1.85,P<0.01)和II(HR=1.37,95%CI1.23-1.52,P<0.01),NACT的预后较差。在第三阶段,NACT和AC的OS差异无统计学意义(HR=1.1,95%CI0.99~1.22,P=0.05)。
    结论:在一个真实的全国可切除结肠癌患者队列中,NACT与AC相比没有操作系统优势。未来的研究应该检查哪些患者子集可能受益于新辅助方法。
    BACKGROUND: Surgery followed by pathology-guided adjuvant therapy is standard treatment for colon cancer. Data from the FOxTROT clinical trial showed potential benefit of a 6-wk neoadjuvant chemotherapy (NACT) in T3/T4 patients. The present study evaluated real-world outcomes of neoadjuvant therapy in a national cohort of patients with resectable colon cancer.
    METHODS: 169,120 patients with clinical stage I, II, or III colon cancer from the National Cancer Database registry were included. Patients were categorized as having received neoadjuvant therapy followed by surgery (NACT), surgery then adjuvant chemotherapy (AC), or surgery alone. Factors associated with treatment sequencing and outcomes were assessed.
    RESULTS: Of identified patients, 1.4% received NACT including 0.5% of stage I, 1.8% of stage II, and 3.0% of stage III. For stage I, 5-y overall survival (OS) was 74.7% after AC, 62.2% after NACT, and 76.4% after SA. For stage II, 5-y OS was 73.2% after AC, 66.8% after NACT, and 64.3% after SA. For stage III, 5-y OS was 67.3% after AC, 67.7% after NACT, and 42.4% after SA. Cox proportional-hazards model suggested NACT had worse outcomes versus AC in clinical stages I (hazard ratio [HR] = 1.59, 95% confidence interval [CI] 1.39-1.85, P < 0.01) and II (HR = 1.37, 95% CI 1.23-1.52, P < 0.01). In stage III, there was no difference in OS between NACT and AC (HR = 1.1, 95% CI 0.99-1.22, P = 0.05).
    CONCLUSIONS: In a real-world national cohort of patients with resectable colon cancer, NACT had no OS benefit over AC. Future studies should examine which subset of patients might benefit from neoadjuvant approaches.
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  • 文章类型: Journal Article
    研究证实,鞘氨醇激酶1(SPHK1)/鞘氨醇1-磷酸受体(S1PRs)和血小板衍生生长因子受体(PDGFR)在肿瘤的发生和发展中起重要作用。然而,SPHK1/S1PRs和PDGFR在结肠腺癌(COAD)中的表达和临床价值尚不清楚.本研究旨在探讨SPHK1/S1PRs和PDGFRs在COAD中的表达,并进一步探讨其在预测COAD患者预后中的作用。
    使用癌症基因组图谱(TCGA)和基因型-组织表达(GTEx)数据库分析COAD患者组织中的SPHK1/S1PRs和PDGFR表达。Kaplan-Meier生存分析用于评估SPHK1/S1PRs和PDGFRs在COAD患者中的预后作用。采用Spearman相关分析评价COAD中SPHK1/S1PRs与PDGFRs的关系。然后,采用χ2检验分析SPHK1/S1PR3/PDGFRB与患者临床病理特征的相关性。此外,使用基因本体论(GO)和京都基因和基因组百科全书(KEGG)功能富集分析预测了S1PR3和PDGFRB共同调节的可能信号通路。使用最小绝对收缩和选择算子(LASSO)回归来鉴定共调节S1PR3和PDGFRB表达的hub基因。构建了基于hub基因的COPD患者预后模型。最后,研究了hub基因与肿瘤免疫细胞浸润的关系。
    COAD患者组织中SPHK1和PDGFRB的表达水平显着上调(分别为P<0.001和P<0.001)。此外,Kaplan-Meier分析显示,SPHK1和S1PR3高表达的COAD患者的总生存期(OS)短于低表达水平的COAD患者(P=0.013和P=0.005)。Spearman相关分析证实,S1PR3与PDGFRB的表达呈显著正相关(P<0.001,r=0.790)。此外,我们发现高SPHK1和PDGGRB表达水平与神经周侵袭相关(分别为P<0.001和P=0.011)。S1PR3和PDGGRB的高表达与N期显著相关(分别为P=0.002和P=0.021)。高水平的SPHK1、S1PR3和PDGFRB与淋巴结浸润相关。(分别为P=0.018,P=0.004和P=0.001)。GO和KEGG结果显示S1PR3和PDGFRB可能参与COAD细胞细胞外基质组织和细胞信号转导。五个枢纽基因,SFRP2,GPRC5B,使用LASSO回归鉴定RSPO3、FGF14和TCF7L1。生存分析显示,高危组的OS明显短于低危组。结果表明,与低危组相比,高危组的肿瘤免疫细胞显着增加。
    S1PR3和PDGFRB可能是预测COAD患者淋巴转移和不良预后的重要标志物。潜在的机制可能涉及免疫细胞浸润。
    UNASSIGNED: Studies verified that sphingosine kinase 1 (SPHK1)/sphingosine 1-phosphate receptors (S1PRs) and platelet-derived growth factor receptors (PDGFRs) play important roles in tumor occurrence and progression. However, the expression and clinical value of SPHK1/S1PRs and PDGFRs in colon adenocarcinoma (COAD) remains unclear. This study aimed to explore the expression of SPHK1/S1PRs and PDGFRs in COAD and further investigate their roles in predicting the prognosis of patients with COAD.
    UNASSIGNED: SPHK1/S1PRs and PDGFRs expression in tissues from patient with COAD were analyzed using The Cancer Genome Atlas (TCGA) and Genotype-Tissue Expression (GTEx) databases. Kaplan-Meier survival analysis was used to evaluate the prognostic roles of SPHK1/S1PRs and PDGFRs in patients with COAD. Spearman\'s correlation analysis was performed to assess the relationship between SPHK1/S1PRs and PDGFRs in COAD. Then, χ2 test was performed to analyze the correlation between SPHK1/S1PR3/PDGFRB and clinicopathological characteristics of the patients. Additionally, possible signaling pathways co-regulated by S1PR3 and PDGFRB were predicted using Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) functional enrichment analyses. Least absolute shrinkage and selection operator (LASSO) regression was used to identify hub genes that co-regulated S1PR3 and PDGFRB expression. A prognostic model based on hub genes was constructed for patients with COPD. Finally, the relationship between the hub genes and tumor immune cell infiltration was investigated.
    UNASSIGNED: The expression levels of SPHK1 and PDGFRB were significantly upregulated in COAD patient tissues (P < 0.001 and P < 0.001, respectively). Moreover, Kaplan-Meier analysis showed that patients with COAD with high expression levels of SPHK1 and S1PR3 had shorter overall survival (OS) than those with low expression levels (P = 0.013 and P = 0.005, respectively). Spearman\'s correlation analysis verified a strong positive correlation (P < 0.001, r = 0.790) between the expression of S1PR3 and PDGFRB. In addition, we found that high SPHK1 and PDGGRB expression levels were associated with perineural invasion (P < 0.001 and P = 0.011, respectively). High expression of S1PR3 and PDGGRB was prominently associated with N stage (P = 0.002 and P = 0.021, respectively). High levels of SPHK1, S1PR3, and PDGFRB were associated with lymph node invasion. (P = 0.018, P = 0.004, and P = 0.001, respectively). GO and KEGG results revealed that S1PR3 and PDGFRB may participate in COAD cell extracellular matrix organization and cellular signal transduction. Five hub genes, SFRP2, GPRC5B, RSPO3, FGF14, and TCF7L1, were identified using LASSO regression. Survival analysis showed that the OS in the high-risk group was remarkably shorter than that in the low-risk group. The results indicated that tumor immune cells were significantly increased in the high-risk group compared to those in the low-risk group.
    UNASSIGNED: S1PR3 and PDGFRB may be important markers for predicting lymphatic metastasis and poor prognosis in patients with COAD. The underlying mechanisms may involve immune cell infiltration.
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  • 文章类型: Journal Article
    结肠腺癌(COAD)中的钙激活氯通道(CLCA4)和免疫浸润尚未得到广泛研究。这项工作彻底采用了几个数据集来评估表达,预后,以及CLCA4在癌症中的免疫浸润与临床病理特征之间的关系,以及研究潜在的信号通路。人类蛋白质图谱(HPA),TIMER,UALCAN,TISIB,GSCA,SangerBox,遗传狂躁症,和LinkedOmics是使用的数据集之一。研究结果表明,与正常组织相比,COAD组织的CLCA4表达水平较低。CLCA4表达水平较低的患者预后较差。对于验证,使用免疫组织化学(HPA)。CLCA4mRNA表达与其拷贝数变异(CNV)呈正相关,CLCA4CNV与免疫浸润有关。随后的调查证明了免疫细胞标志物之间的关联,免疫检查点基因,和CLCA4的免疫浸润。M0患者的总生存期和无病生存期明显优于M1患者,肿瘤分期M0和M1组的CLCA4表达水平明显不同。其在离子通道活性中的大量富集,跨膜转运蛋白活性,消化,基因本体论分析揭示了其他生物过程。氧化磷酸化,胰腺分泌,帕金森病和阿尔茨海默病,肾素分泌,和其他信号通路是CLCA4的主要关联。很明显,免疫微环境和功能像离子运输,新陈代谢,和肠道消化都受到CLCA4表达的影响。
    The calcium-activated chloride channel (CLCA4) in colon adenocarcinoma (COAD) and immunological infiltration have not been extensively studied. This work thoroughly employed several datasets to assess the expression, prognosis, and association between immune infiltration and clinicopathological characteristics of CLCA4 in cancer, as well as look into potential signalling pathways. The human protein atlas (HPA), TIMER, UALCAN, TISIDB, GSCA, SangerBox, GeneMANIA, and LinkedOmics were among the datasets that were used. The findings demonstrated that, in comparison to normal tissues, COAD tissues had lower levels of CLCA4 expression. The prognosis was worse for those whose levels of CLCA4 expression were lower. For validation, immunohistochemistry (HPA) was used. Positive correlations between CLCA4 mRNA expression and its copy number variation (CNV) were observed, and CLCA4 CNV was linked to immunological infiltration. Subsequent investigation demonstrated the association between immune cell markers, immune checkpoint genes, and immunological infiltration with CLCA4. The overall survival and disease-free survival of M0 patients were considerably better than those of M1 patients, and the groups with tumour stages M0 and M1 had notably different levels of CLCA4 expression. Its substantial enrichment in ion channel activity, transmembrane transporter activity, digestion, and other biological processes was revealed by gene ontology analysis. Oxidative phosphorylation, pancreatic secretion, Parkinson\'s and Alzheimer\'s diseases, renin secretion, and other signalling pathways were the primary associations found for CLCA4. It is evident that the immunological microenvironment and functions like ion transport, metabolism, and intestinal digestion are all impacted by CLCA4 expression.
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  • 文章类型: Journal Article
    背景:Otopetrin2(OTOP2)是一种保守的离子通道蛋白,可调节细胞信号传导,增长,和发展。尽管在结肠腺癌(COAD)的一些研究中已经报道了OTOP2在肿瘤抑制中的作用,其特点是对肿瘤的免疫调节作用。方法:我们对OTOP2的表达及其与临床病理特征的关系进行了全面分析,免疫相关途径,使用来自癌症基因组图谱(TCGA)的数据,并通过组织微阵列(TMA)证实了该发现。我们进行了体外测定以证明OTOP2在COAD细胞中的肿瘤抑制作用。结果:OTOP2在多种肿瘤中表达异常,在COAD患者中表达明显下调(P<0.001)。此外,OTOP2的存在与COAD诊断患者的生存率提高相关.体外实验表明OTOP2抑制细胞增殖,迁移,入侵,和附着力。TCGA数据库的基因集富集分析表明OTOP2与抗原呈递途径和T细胞应答呈正相关。免疫表型(IPS)表明OTOP2表达与MHC分子表达呈正相关(P<0.001),OTOP2表达与效应细胞数量呈正相关(P<0.01)。TMA的免疫组织化学分析显示OTOP2表达与MHC-I之间有很强的关联,TAP1和TAP2表达,COAD患者OTOP2表达与CD8+T细胞浸润之间的关系。结论:总之,我们的研究强调了OTOP2作为肿瘤抑制因子的作用,提示其用作COAD患者免疫治疗反应的预后指标和预测指标。
    Background: Otopetrin 2 (OTOP2) is a conserved ion channel protein that regulates cell signaling, growth, and development. Although the role of OTOP2 in tumor suppression has been reported in several studies of colon adenocarcinoma (COAD), characterized its immunomodulatory effects on tumors. Methods: We conducted a thorough analysis of OTOP2 expression and its association with clinicopathological characteristics, immune-related pathways, and immune-related molecules in individuals with COAD using data from The Cancer Genome Atlas (TCGA) and confirmed the findings with tissue microarrays (TMAs). We conducted in vitro assays to demonstrate the tumor suppressive effect of OTOP2 in COAD cells. Results: OTOP2 expression was abnormal in multiple types of tumors and was significantly downregulated in patients with COAD (P<0.001). Moreover, the presence of OTOP2 was linked to enhanced survival in individuals diagnosed with COAD. In vitro experiments showed that OTOP2 suppressed cell proliferation, migration, invasion, and adhesion. Gene set enrichment analysis of the TCGA database indicated that OTOP2 was positively correlated with antigen presentation pathways and T cell responses. The immunophenoscore (IPS) indicated a positive correlation between OTOP2 expression and MHC molecule expression (P<0.001) as well as between OTOP2 expression and the number of effector cells (P<0.01). Immunohistochemical analysis of the TMAs revealed strong associations between OTOP2 expression and MHC-I, TAP1, and TAP2 expression, and between OTOP2 expression and CD8+ T cell infiltration in COAD patients. Conclusion: In summary, our research emphasizes the role of OTOP2 as a tumor suppressor, suggesting its use as a prognostic indicator and predictor of response to immunotherapy in COAD patients.
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