Optical coherence tomography

光学相干层析成像
  • 文章类型: Journal Article
    背景:根据泪膜破裂时间(TBUT),比较使用眼前节光学相干断层扫描(AS-OCT)进行角膜和角膜上皮厚度标测的可重复性和可重复性。
    方法:根据TBUT将纳入的眼睛分为三个亚组(第1组:TBUT≤5s,组2:5s10s)。由两名操作员分别对所有眼睛进行三次成像,以基于包含9mm直径区域的空间区域获得角膜和角膜上皮的厚度图(TM)。每个TM由25个区域组成。操作人员(可重复性)和操作人员间(可重复性)标准偏差(Sws),变异系数(CoV),计算并比较了所有区域的测试之间的组内相关系数(ICC)。
    结果:总之,纳入67名受试者的132只眼(第1、2和3组分别为50、47和35只眼)。大多数区域的角膜上皮厚度和角膜厚度的ICC>0.75。配对比较显示,AS-OCT在第1组的可重复性低于第2组和第3组(P<0.05)。然而,第2组和第3组显示相似的结果。角膜上皮厚度的Sws和CoV没有显着差异。虽然在大多数区域中没有观察到角膜厚度的显着差异。
    结论:TBUT显著影响角膜和角膜上皮厚度测量的可重复性。泪膜稳定性差需要仔细评估角膜上皮厚度。
    BACKGROUND: To compare the repeatability and reproducibility of corneal and corneal epithelial thickness mapping using anterior segment optical coherence tomography (AS-OCT) according to tear film break-up time (TBUT).
    METHODS: The included eyes were divided into three subgroups according to TBUT (group 1: TBUT ≤ 5 s, group 2: 5 s < TBUT ≤ 10 s, and group 3: TBUT > 10 s). All eyes were imaged separately thrice by two operators to obtain the thickness maps (TMs) of the cornea and corneal epithelium based on spatial zones encompassing a 9-mm-diameter area. Each TM consisted of 25 areas. Intraoperator (repeatability) and interoperator (reproducibility) standard deviations (Sws), coefficients of variation (CoVs), and intraclass correlation coefficients (ICCs) among the tests were calculated and compared in all the areas.
    RESULTS: Altogether, 132 eyes of 67 subjects were included (50, 47, and 35 eyes in groups 1, 2, and 3; respectively). The ICCs of corneal epithelial thickness and corneal thickness were > 0.75 in most of the areas. Pairwise comparisons showed that AS-OCT exhibited lower repeatability in group 1 than in groups 2 and 3 (P < 0.05). However groups 2 and 3 showed similar results. Sws and CoVs of corneal epithelial thickness exhibited no significant interoperator differences. While no significant differences were observed in corneal thickness in most of the areas.
    CONCLUSIONS: TBUT significantly influences the repeatability of corneal and corneal epithelial thickness measurements. Poor tear film stability requires careful evaluation of corneal epithelial thickness.
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  • 文章类型: Journal Article
    光学相干层析成像对于捕获动态过程具有很大的实用性,但此类应用尤其是数据密集型。生物组织等样本在不同的时间尺度上表现出时间特征,这使得数据缩减具有挑战性。
    我们提出了一种使用非均匀时间采样以压缩方式捕获样本的短期和长期相关性的方法,以减少扫描时间和内存开销。
    所提出的方法分离了白噪声的相对贡献,波动特征,和固定特征。该方法已在三维培养的乳腺上皮细胞球体上证明,可捕获细胞内运动而不损失信号完整性。
    结果表明,保留了运动性的空间模式,并且用blebbistatin处理的球体的假设检验,一种运动蛋白抑制剂,在高达8倍的压缩下保持不变。
    压缩测量短期和长期相关性的能力将在(3+1)D成像和高通量筛选中实现新的应用。
    UNASSIGNED: Optical coherence tomography has great utility for capturing dynamic processes, but such applications are particularly data-intensive. Samples such as biological tissues exhibit temporal features at varying time scales, which makes data reduction challenging.
    UNASSIGNED: We propose a method for capturing short- and long-term correlations of a sample in a compressed way using non-uniform temporal sampling to reduce scan time and memory overhead.
    UNASSIGNED: The proposed method separates the relative contributions of white noise, fluctuating features, and stationary features. The method is demonstrated on mammary epithelial cell spheroids in three-dimensional culture for capturing intracellular motility without loss of signal integrity.
    UNASSIGNED: Results show that the spatial patterns of motility are preserved and that hypothesis tests of spheroids treated with blebbistatin, a motor protein inhibitor, are unchanged with up to eightfold compression.
    UNASSIGNED: The ability to measure short- and long-term correlations compressively will enable new applications in (3+1)D imaging and high-throughput screening.
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  • 文章类型: Journal Article
    背景:急性放射性皮炎(ARD)是最广泛报道的放疗引起的不良事件。目前,没有客观或可靠的方法来测量ARD。
    目的:我们的主要目的是使用光学相干断层扫描(OCT)皮肤扫描的计算模型来识别和量化放射治疗的效果。次要目标包括确定不同放射治疗方案和辅助局部治疗的ARD影响。
    方法:我们进行了前瞻性,在三级转诊中心对符合全乳放疗(WBRT)条件的乳腺癌患者进行单中心病例系列研究.
    结果:根据放疗方案(15、20和25分)共纳入和分配了39名妇女。设计计算模型以定量分析OCT结果。放疗后,OCT扫描更敏感地显示了84.6%的患者的血管形成变化(对比69.2%的临床检查ARD患者)。OCT量化了WBRT结束时血管形成的增加(P<.05)和3个月后的减少(P=.032)。OCT显示的红斑性皮肤变化在25分方案中更为明显。
    结论:OCT计算模型允许识别和量化辐照皮肤上的血管形成变化,即使在没有临床ARD的情况下。这可以允许设计超出所涉及的患者的肤色的ARD的标准化方案。
    BACKGROUND: acute radiation dermatitis (ARD) is the most widely reported radiotherapy-induced adverse event. Currently, there is no objective or reliable method to measure ARD.
    OBJECTIVE: our main objective was to identify and quantify the effects of radiotherapy with a computational model using optical coherence tomography (OCT) skin scanning. Secondary objectives included determining the ARD impact of different radiotherapeutic schemes and adjuvant topical therapies.
    METHODS: we conducted a prospective, single-center case series study in a tertiary referral center of patients with breast cancer who were eligible for whole breast radiotherapy (WBRT).
    RESULTS: a total of 39 women were included and distributed according to the radiotherapeutic schemes (15, 20, and 25 fractions). A computational model was designed to quantitatively analyze OCT findings. After radiotherapy, OCT scanning was more sensitive revealing vascularization changes in 84.6% of the patients (vs 69.2% of the patients with ARD by clinical examination). OCT quantified an increased vascularization at the end of WBRT (P < .05) and a decrease after 3 months (P = .032). Erythematous skin changes by OCT were more pronounced in the 25-fraction regime.
    CONCLUSIONS: an OCT computational model allowed for the identification and quantification of vascularization changes on irradiated skin, even in the absence of clinical ARD. This may allow the design of standardized protocols for ARD beyond the skin color of the patients involved.
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  • 文章类型: Journal Article
    已知与年龄相关的神经元适应有助于维持功能。这项研究旨在检查年轻和中年C57BL/6J和Thy1-YFPh小鼠的总体年龄相关的体内视网膜功能适应(使用视网膜电图),并将其与体内视网膜结构(使用光学相干断层扫描)联系起来。Thy1-YFPh小鼠的视网膜电图反应通常大于C57BL/6J小鼠,Thy1-YFPh小鼠体内视网膜层厚度相似,但内部/外部光感受器节段更长。相对于3个月大的小鼠,12月龄小鼠的光感受器功能降低(C57BL/6J84.0±2.5%;Thy1-YFPh80.2±5.2%)和双极细胞(C57BL/6J75.6±2.3%;Thy1-YFPh68.1±5.5%)。随着年龄的增长,神经节细胞功能相对保留(C57BL/6J79.7±3.7%;Thy1-YFPh91.7±5.0%),这与b波(双极细胞)对光的敏感性增加有关。神经节细胞功能与b波振幅和灵敏度相关。这项研究表明,有正常的与年龄相关的适应来保持功能输出。不同的小鼠品系可能具有与年龄相关的适应能力,因此在检查与年龄相关的损伤易感性时应予以考虑。
    Age-related neuronal adaptations are known to help maintain function. This study aims to examine gross age-related in vivo retinal functional adaptations (using electroretinography) in young and middle aged C57BL/6J and Thy1-YFPh mice and to relate this to in vivo retinal structure (using optical coherence tomography). Electroretinography responses were generally larger in Thy1-YFPh mice than in C57BL/6J mice, with similar in vivo retinal layer thicknesses except for longer inner/outer photoreceptor segment in Thy1-YFPh mice. Relative to 3-month-old mice, 12-month-old mice showed reduced photoreceptor (C57BL/6J 84.0±2.5 %; Thy1-YFPh 80.2±5.2 %) and bipolar cell (C57BL/6J 75.6±2.3 %; Thy1-YFPh 68.1±5.5 %) function. There was relative preservation of ganglion cell function (C57BL/6J 79.7±3.7 %; Thy1-YFPh 91.7±5.0 %) with age, which was associated with increased b-wave (bipolar cell) sensitivities to light. Ganglion cell function was correlated with both b-wave amplitude and sensitivity. This study shows that there are normal age-related adaptations to preserve functional output. Different mouse strains may have varied age-related adaptation capacity and should be taken into consideration when examining age-related susceptibility to injury.
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  • 文章类型: Journal Article
    This article reviews literature on the use of artificial intelligence (AI) for screening, diagnosis, monitoring and treatment of glaucoma. The first part of the review provides information how AI methods improve the effectiveness of glaucoma screening, presents the technologies using deep learning, including neural networks, for the analysis of big data obtained by methods of ocular imaging (fundus imaging, optical coherence tomography of the anterior and posterior eye segments, digital gonioscopy, ultrasound biomicroscopy, etc.), including a multimodal approach. The results found in the reviewed literature are contradictory, indicating that improvement of the AI models requires further research and a standardized approach. The use of neural networks for timely detection of glaucoma based on multimodal imaging will reduce the risk of blindness associated with glaucoma.
    В первой части обзора данных литературы, посвященной применению методов искусственного интеллекта (ИИ) для скрининга, диагностики, мониторинга и лечения глаукомы, приводятся сведения о том, как методы ИИ повышают эффективность скрининга глаукомы. Представлены технологии применения глубокого обучения, включая нейронные сети, в анализе больших данных, полученных с помощью методов визуализации глаза (фундус-изображений глазного дна, оптической когерентной томографии переднего и заднего отрезков глаза, цифровой гониоскопии, ультразвуковой биомикроскопии и т.д.), включая мультимодальный подход. Результаты проанализированной литературы носят противоречивый характер, что указывает на необходимость дальнейшего поиска с учетом стандартизированного подхода для повышения эффективности моделей ИИ. Применение нейросетей для своевременного выявления глаукомы, основанное на мультимодальной визуализации, позволит снизить риск слепоты, ассоциированной с глаукомой.
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  • 文章类型: English Abstract
    Multiple sclerosis (MS) is a chronic autoimmune-inflammatory and neurodegenerative disease.
    OBJECTIVE: This study explores the main structural changes in patients with MS and their relationships with the activity and type of disease course.
    METHODS: This prospective study included 159 patients (318 eyes) with an established diagnosis of MS: group (44 eyes; 13.84%) - relapsing-remitting type MS (RRMS) lasting up to 1 year without a history of optic neuritis (ON); group 2 (30 eyes; 9.43%) - RRMS up to 1 year with ON; group 3 (56 eyes; 17.61%) - RRMS lasting from 1 to 10 years without ON; group 4 (38 eyes; 11.95%) - RRMS from 1 to 10 years with ON; group 5 (49 eyes; 15.41%) - RRMS >10 years without ON; group 6 (37 eyes; 11.63%) - RRMS >10 years with ON; group 7 (34 eyes; 10.69%) - secondary progressive multiple sclerosis (SPMS) without ON; group 8 (30 eyes; 9.43%) - SPMS with ON. Patients underwent standard ophthalmological examinations, including optical coherence tomography.
    RESULTS: A decrease in structural parameters was diagnosed, progressing with the duration of the disease and the presence of ON: the minimum values of mGCL+IPL (65.83±9.14 μm) and mSNFL (76.37±14.77 μm) were detected in the group with SPMS with ON. High inverse correlations of EDSS with mGCL+IPL and mRNFL were demonstrated, with maximum in the group with the longest duration of MS without ON (-0.48 and -0.52 (p=0.01), respectively).
    CONCLUSIONS: Changes in the thickness of the structural parameters of the retina, measured by OCT, can be considered as a predictor of the course of MS.
    Рассеянный склероз (РС) — хроническое аутоиммунно-воспалительное и нейродегенеративное заболевание.
    UNASSIGNED: Изучение основных структурных изменений сетчатки у пациентов с РС и их взаимосвязи с активностью и типом течения заболевания.
    UNASSIGNED: В проспективное исследование включено 159 пациентов (318 глаз) с установленным диагнозом РС: 1-я группа (44 глаза; 13,84%) — ремиттирующий РС (РРС) длительностью до 1 года без оптического неврита (ОН) в анамнезе; 2-я группа (30 глаз; 9,43%) — РРС длительностью до 1 года с ОН; 3-я группа (56 глаз; 17,61%) — РРС длительностью от 1 года до 10 лет без ОН; 4-я группа (38 глаз; 11,95%) — РРС длительностью от 1 года до 10 лет с ОН; 5-я группа (49 глаз; 15,41%) — РРС длительностью > 10 лет без ОН; 6-я группа (37 глаз; 11,63%) — РРС длительностью >10 лет с ОН; 7-я группа (34 глаза; 10,69%) — РС с вторично-прогрессирующим течением (ВПРС) без ОН; 8-я группа (30 глаз; 9,43%) — ВПРС с ОН. Пациентам выполняли стандартное офтальмологическое обследование, включающее проведение оптической когерентной томографии (ОКТ).
    UNASSIGNED: Диагностировано снижение структурных показателей, прогрессирующее в соответствии с длительностью заболевания и наличием ОН: минимальные значения срGCL+IPL (65,83±9,14 мкм) и срRNFL (76,37±14,77 мкм) выявлены в группе с ВПРС с ОН. Продемонстрированы высокие обратные корреляционные связи EDSS с срGCL+IPL и срRNFL, максимальные в группе с наибольшей длительностью РС без ОН (–0,48 и –0,52 соответственно; p=0,01).
    UNASSIGNED: Изменения толщины структурных параметров сетчатки, оцениваемые при ОКТ, могут быть рассмотрены как предиктор течения РС.
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  • 文章类型: Journal Article
    系统性癌症的眼内转移最常见于脉络膜,其次是虹膜和睫状体,而视网膜转移极为罕见。在这里,我们介绍了一个视网膜转移病例,并分析了多模态成像。
    一名66岁女性,5年前有乳腺癌病史,她的右眼视力模糊,被转诊到我们部门。初次检查时,她的最佳矫正视力(BCVA)为1.0眼右旋(OD)。眼底检查显示微黄色隆起的病变,表面不规则,测量2个乳头状直径,以及视盘颞侧浆液性视网膜脱离(SRD)。光学相干断层扫描显示SRD,等强度结节延伸到所有视网膜层。荧光素血管造影显示肿瘤早期和晚期的荧光高度和强烈的荧光渗漏,分别。吲哚菁绿血管造影描绘了肿块内的喂食器和引流血管。激光散斑流图(LSFG)显示肿瘤内部的冷信号。基于这些临床发现,肿块被诊断为视网膜转移。初次访问八天后,患者接受了对右眼的外部束辐射。初步诊断后一个月,她的BCVA是0.7OD,肿瘤是局部的,SRD有所下降。LSFG表明血管重塑,肿瘤中信号略微温暖。
    视网膜转移的LSFG显示冷信号,提示肿瘤血流速度低,肿瘤可能生长缓慢。LSFG的发现可能在临床诊断中发挥支持作用,并有助于更好地了解并乳头状肿瘤的发病机理。
    UNASSIGNED: Intraocular metastases of systemic cancer are most frequently located in the choroid, followed by the iris and ciliary body, while retinal metastases are extremely rare. Here we present a case of retinal metastasis and analyze multimodal imaging.
    UNASSIGNED: A 66-year-old woman with a medical history of breast cancer 5 years earlier was referred to our Department struggling with blurry vision in her right eye. At initial examination, her best-corrected visual acuity (BCVA) was 1.0 oculus dexter (OD). Fundus examination revealed a yellowish elevated lesion with irregular surface, measuring 2 papillary diameters, along with serous retinal detachment (SRD) on the temporal side of the optic disc. Optical coherence tomography showed SRD with an isointense nodule extending across all retinal layers. Fluorescein angiography showed hyperfluorescence and vigorous fluorescence leakage inside the tumor in the early and late phases, respectively. Indocyanine green angiography depicted feeder and drainage vessels within the mass. Laser speckle flowgraphy (LSFG) showed a cold signal inside the tumor. Based on these clinical findings, the mass was diagnosed as a retinal metastasis. Eight days after the initial visit, the patient underwent external beam radiation to the right eye. One month after the initial diagnosis, her BCVA was 0.7 OD, the tumor was localized, and SRD had decreased. LSFG indicated vascular remodeling with marginally warmer signals in the tumor.
    UNASSIGNED: LSFG of the retinal metastasis showed a cold signal, suggesting low tumor blood flow velocity and that the tumor may have grown slowly. LSFG findings are likely to play a supportive role in clinical diagnosis and contribute to better understanding of pathogenesis in juxtapapillary tumors.
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  • 文章类型: Journal Article
    急性冠脉综合征(ACS)患者,经常由斑块破裂(PR)引起,通常在残留病变和罪魁祸首病变中都有易损斑块。然而,这种情况是否也发生在斑块糜烂(PE)患者中是未知的。我们回顾性分析了88例接受了最佳相干断层扫描(OCT)和血管内超声(IVUS)的ACS患者的数据。根据使用OCT识别的罪魁祸首病变的斑块形态,患者分为PE组(n=23)和PR组(n=35).在经皮冠状动脉介入治疗后,比较了两组之间使用背向散射IVUS评估的残留病变的组织特征。PE组的脂质体积百分比和纤维体积百分比明显低于PR组(35.0±17.8%vs49.2±13.4%,p<0.001;63.2±17.1%vs50.3±13.1%,分别为p=0.002)。受试者工作特征曲线分析显示,残留病变中的脂质体积百分比是估计罪犯病变斑块形态的重要判别因素(最佳临界值,<43.5%;敏感性和特异性值分别为73.9%和68.6%,分别)。总之,与PR患者相比,PE患者的脂质体积百分比明显较低,残留病变中的纤维体积百分比明显较高,提示PE患者的冠状动脉斑块性质与PR患者不同。
    Patients with acute coronary syndrome (ACS), frequently caused by plaque rupture (PR), often have vulnerable plaques in residual lesions as well as in culprit lesions. However, whether this occurs in patients with plaque erosion (PE) as well is unknown. We retrospectively analyzed the data of 88 patients with ACS who underwent both optimal coherence tomography (OCT) and intravascular ultrasound (IVUS). Based on plaque morphology of the culprit lesions identified using OCT, patients were classified into PE (n=23) and PR (n=35) groups. The tissue characteristics of residual lesions evaluated using integrated backscatter IVUS were compared between both groups after percutaneous coronary intervention. The PE group had a significantly lower percent lipid volume and a higher percent fibrous volume than the PR group (35.0±17.8% vs 49.2±13.4%, p<0.001; 63.2±17.1% vs 50.3±13.1%, p=0.002, respectively). Receiver operating characteristic curve analysis revealed that percent lipid volume in the residual lesions was a significant discriminant factor in estimating the plaque morphology of the culprit lesion (optimal cut-off value, <43.5%; sensitivity and specificity values were 73.9% and 68.6%, respectively). In conclusion, patients with PE had a significantly lower percent lipid volume and a significantly higher percent fibrous volume in the residual lesions than those with PR, suggesting that the nature of coronary plaques in patients with PE is different from that of those with PR.
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  • 文章类型: Journal Article
    背景:炎症性皮肤病,比如牛皮癣,特应性湿疹,和接触性皮炎由于其不同的临床表现和快速和精确的诊断评估的需要带来诊断挑战.
    目的:虽然最近的研究描述了非侵入性成像设备,如光学相干断层扫描和线场共聚焦OCT(LC-OCT),作为实时可视化病理特征的可能技术,尚未进行标准化分析和验证.
    方法:诊断为特应性湿疹的患者的一百四十个病变(57),牛皮癣(50),和接触性皮炎(33)使用OCT和LC-OCT成像。采用统计分析来评估其特征形态特征的重要性。此外,开发了一种基于Gini系数计算的决策树算法,以识别关键属性和准确分类疾病组的标准。
    结果:描述性统计揭示了湿疹的独特形态特征,牛皮癣,和接触性皮炎病变。多变量逻辑回归证明了这些特征的重要性,提供了三种炎症状态之间的强大区别。决策树算法通过识别疾病判别的最佳属性,进一步提高了分类精度,强调特定的形态学标准对临床快速诊断至关重要。
    结论:描述性统计的组合方法,多元逻辑回归,决策树算法提供了与每个炎症性皮肤病相关的独特方面的透彻理解。这项研究为病变分类提供了一个实用的框架,增强临床医生对成像结果的可解释性。
    BACKGROUND: Inflammatory skin diseases, such as psoriasis, atopic eczema, and contact dermatitis pose diagnostic challenges due to their diverse clinical presentations and the need for rapid and precise diagnostic assessment.
    OBJECTIVE: While recent studies described non-invasive imaging devices such as Optical coherence tomography and Line-field confocal OCT (LC-OCT) as possible techniques to enable real-time visualization of pathological features, a standardized analysis and validation has not yet been performed.
    METHODS: One hundred forty lesions from patients diagnosed with atopic eczema (57), psoriasis (50), and contact dermatitis (33) were imaged using OCT and LC-OCT. Statistical analysis was employed to assess the significance of their characteristic morphologic features. Additionally, a decision tree algorithm based on Gini\'s coefficient calculations was developed to identify key attributes and criteria for accurately classifying the disease groups.
    RESULTS: Descriptive statistics revealed distinct morphologic features in eczema, psoriasis, and contact dermatitis lesions. Multivariate logistic regression demonstrated the significance of these features, providing a robust differentiation between the three inflammatory conditions. The decision tree algorithm further enhanced classification accuracy by identifying optimal attributes for disease discrimination, highlighting specific morphologic criteria as crucial for rapid diagnosis in the clinical setting.
    CONCLUSIONS: The combined approach of descriptive statistics, multivariate logistic regression, and a decision tree algorithm provides a thorough understanding of the unique aspects associated with each inflammatory skin disease. This research offers a practical framework for lesion classification, enhancing the interpretability of imaging results for clinicians.
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  • 文章类型: Journal Article
    用于医学图像分析的深度学习分类模型通常对来自用于获取训练数据的扫描仪的数据表现良好。然而,当这些模型应用于来自不同供应商的数据时,他们的表现往往会大幅下降。仅在来自特定扫描仪的扫描内发生的工件是这种较差的可泛化性的主要原因。我们旨在使用一种称为基于不确定性的实例排除(UBIX)的新颖方法来增强深度学习分类模型的可靠性。UBIX是可在多实例学习(MIL)设置中采用的推理时间模块。MIL是其中袋子(通常是图像)的实例(通常是作物或切片)有助于袋子级输出的范例。而不是假设所有实例对袋级输出的贡献相等,UBIX使用不确定性估计检测由于本地工件而损坏的实例,在MIL汇集之前减少或完全忽略他们的贡献。在我们的实验中,实例是2D切片,袋子是体积图像,但替代定义也是可能的。虽然UBIX通常适用于不同的分类任务,我们关注光学相干断层扫描中年龄相关性黄斑变性的分期.我们的模型在来自单个扫描仪的数据上进行了训练,并在来自不同供应商的外部数据集上进行了测试。其中包括特定于供应商的工件。UBIX表现出可靠的行为,性能略有下降(二次加权κ(κw)从0.861下降到0.708),当应用于来自不同供应商的包含伪影的图像时;而没有UBIX的最先进的3D神经网络在同一测试集上的性能受到重大损害(κw从0.852到0.084)。我们表明,可以通过OOD检测来识别具有看不见的伪影的实例。UBIX可以减少它们对袋级预测的贡献,在不重新训练新数据的情况下提高可靠性。这可能会增加人工智能模型对其他扫描仪数据的适用性,而不是为其开发的扫描仪。UBIX的源代码,包括训练的模型权重,可通过https://github.com/qurAI-amsterdam/ubix-for-reliable-classification公开。
    Deep learning classification models for medical image analysis often perform well on data from scanners that were used to acquire the training data. However, when these models are applied to data from different vendors, their performance tends to drop substantially. Artifacts that only occur within scans from specific scanners are major causes of this poor generalizability. We aimed to enhance the reliability of deep learning classification models using a novel method called Uncertainty-Based Instance eXclusion (UBIX). UBIX is an inference-time module that can be employed in multiple-instance learning (MIL) settings. MIL is a paradigm in which instances (generally crops or slices) of a bag (generally an image) contribute towards a bag-level output. Instead of assuming equal contribution of all instances to the bag-level output, UBIX detects instances corrupted due to local artifacts on-the-fly using uncertainty estimation, reducing or fully ignoring their contributions before MIL pooling. In our experiments, instances are 2D slices and bags are volumetric images, but alternative definitions are also possible. Although UBIX is generally applicable to diverse classification tasks, we focused on the staging of age-related macular degeneration in optical coherence tomography. Our models were trained on data from a single scanner and tested on external datasets from different vendors, which included vendor-specific artifacts. UBIX showed reliable behavior, with a slight decrease in performance (a decrease of the quadratic weighted kappa (κw) from 0.861 to 0.708), when applied to images from different vendors containing artifacts; while a state-of-the-art 3D neural network without UBIX suffered from a significant detriment of performance (κw from 0.852 to 0.084) on the same test set. We showed that instances with unseen artifacts can be identified with OOD detection. UBIX can reduce their contribution to the bag-level predictions, improving reliability without retraining on new data. This potentially increases the applicability of artificial intelligence models to data from other scanners than the ones for which they were developed. The source code for UBIX, including trained model weights, is publicly available through https://github.com/qurAI-amsterdam/ubix-for-reliable-classification.
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