Mendelian randomization (MR)

孟德尔随机化 (MR)
  • 文章类型: Journal Article
    2019年冠状病毒病(COVID-19)感染与心脏和血管疾病有因果关系。为了确定COVID-19与心血管疾病(CVD)之间的因果关系,我们通过一种称为方差逆加权(IVW)的方法进行了孟德尔随机化(MR)研究.在分析多个SNP时,MR可以通过IVW荟萃方法对多个基因座的影响进行荟萃。加权中位数(WM)是通过根据其权重对所有单个SNP效应值进行排名而获得的分布函数的中位数。当至少50%的信息来自有效的工具变量(IV)时,WM会产生可靠的估计。所包括的IV中的定向基因多效性是允许的,因为MR-Egger不需要通过原点的回归直线。对于MR估计,IVW,采用WM和MR-Egger。敏感性分析采用漏斗图,Cochran的Q测试,MR-Egger截距测试,MR-PRESSO,和遗漏分析。编制了与暴露于COVID-19和CVD相关的SNP。COVID-19感染的CVD,COVID-19实验室/自我报告阴性,和其他非常严重的呼吸道诊断和人群使用MR随机分配。COVID-19实验室/自我报告阴性结果和其他非常严重的呼吸道确诊病例与人群中CVD的MR分析(p>0.05);COVID-19感染到CVD(p=0.033,OR=1.001,95CI:1.000-1.001);MR-Egger结果表明COVID-19感染与CVD风险相关。这项MR研究为COVID-19感染与CVD之间的因果关系的有效性提供了初步证据。
    Infections with the coronavirus disease 2019 (COVID-19) and disorders of the heart and blood vessels are causally related. To ascertain the causal relationship between COVID-19 and cardiovascular disease (CVD), we carried out a Mendelian randomization (MR) study through a method known as inverse variance weighting (IVW). When analyzing multiple SNPs, MR can meta-aggregate the effects of multiple loci by using IVW meta-pooling method. The weighted median (WM) is the median of the distribution function obtained by ranking all individual SNP effect values according to their weights. WM yields robust estimates when at least 50% of the information originates from valid instrumental variables (IVs). Directed gene pleiotropy in the included IVs is permitted because MR-Egger does not require a regression straight line through the origin. For MR estimation, IVW, WM and MR-Egger were employed. Sensitivity analysis was conducted using funnel plots, Cochran\'s Q test, MR-Egger intercept test, MR-PRESSO, and leave-one-out analysis. SNPs related to exposure to COVID-19 and CVD were compiled. CVD for COVID-19 infection, COVID-19 laboratory/self-reported negative, and other very severe respiratory diagnosis and population were randomly assigned using MR. The COVID-19 laboratory/self-reported negative results and other very severe respiratory confirmed cases versus MR analysis of CVD in the population (p ​> ​0.05); COVID-19 infection to CVD (p ​= ​0.033, OR ​= ​1.001, 95%CI: 1.000-1.001); and the MR-Egger results indicated that COVID-19 infection was associated with CVD risk. This MR study provides preliminary evidence for the validity of the causal link between COVID-19 infection and CVD.
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  • 文章类型: Journal Article
    临床研究强调了肉鸡腿部疾病(LD)发作期间骨代谢过程的破坏和血清指标水平的异常波动。然而,这种关联是否存在遗传因果关系仍未确定.因此,这项研究的目的是使用1235测序的白羽肉鸡来识别LD发育的潜在危险因素。我们采用孟德尔随机化(MR)分析来评估骨强度(BS),骨矿物质密度(BMD),胫骨重量(TBW),胫骨长度(TBL),胫骨直径(TBD),骨灰(BA),灰分钙(AshCa),灰分磷(AshP),血清钙(Ca),血清磷(P),血清碱性磷酸酶(ALP),血清骨保护素(OPG)与LD的发生有关。令人信服的证据强调了LD发展风险与BMD降低(比值比(OR)=0.998;95%CI:0.983,0.993;P<0.001)和TBD较窄(OR=0.985,95%CI:0.975,0.994,P=0.002)之间的因果关系。此外,血清OPG浓度(OR:0.995,95%CI:0.992,0.999,P=0.008)与BMD相关(OR=0.0078,95%CI=0.0043至0.0140,P<0.001),表明ALP浓度(OR:0.988,95%CI:0.984,0.993,P<0.001)和TBD(OR=0.0046,95%CI=0.0026,0.0083,P<0.001)之间存在强大的遗传关系。此外,升高的血清钙(OR:0.564,95%CI:0.487,0.655,P<0.001)和P(OR:0.614,95%CI:0.539,0.699,P<0.001)水平与较窄的TBD相关。血清钙水平升高,P,ALP,OPG会导致骨代谢紊乱,而降低的BMD和较窄的TBD与肉鸡发展LD的风险更大。这一发现阐明了肉鸡LD的代谢危险因素,并可以提供有关LD的信息。比如骨质疏松症,在人类中。
    Clinical investigations have highlighted disruptions in bone metabolic processes and abnormal fluctuations in serum indicator levels during the onset of leg disease (LD) in broilers. However, the presence of a genetic causal relationship for this association remains undetermined. Therefore, the aim of this study is to discern the risk factors underlying LD development using 1235 sequenced white-feathered broilers. We employed Mendelian randomization (MR) analysis to assess the associations of bone strength (BS), bone mineral density (BMD), tibial bone weight (TBW), tibial bone length (TBL), tibial bone diameter (TBD), bone ash (BA), ash calcium (Ash Ca), ash phosphorus (Ash P), serum calcium (Ca), serum phosphorus (P), serum alkaline phosphatase (ALP), and serum osteoprotegerin (OPG) with the incidence of LD. Compelling evidence underscores a causal link between the risk of developing LD and decreased BMD (odds ratio (OR) = 0.998; 95% CI: 0.983, 0.993; P < 0.001) and narrower TBD (OR = 0.985, 95% CI: 0.975, 0.994, P = 0.002). Additionally, serum OPG concentrations (OR: 0.995, 95% CI: 0.992, 0.999, P = 0.008) were associated with BMD (OR = 0.0078, 95% CI = 0.0043 to 0.0140, P < 0.001), indicating a robust genetic relationship between ALP concentrations (OR: 0.988, 95% CI: 0.984, 0.993, P < 0.001) and TBD (OR = 0.0046, 95% CI = 0.0026, 0.0083, P < 0.001). Moreover, elevated serum Ca (OR: 0.564, 95% CI: 0.487, 0.655, P < 0.001) and P (OR: 0.614, 95% CI: 0.539, 0.699, P < 0.001) levels were associated with a narrower TBD. Elevated serum levels of Ca, P, ALP, and OPG contribute to disturbances in bone metabolism, while decreased BMD and narrower TBD are associated with a greater risk of developing LD in broilers. This discovery elucidates the metabolic risk factors for LD in broilers and could provide information on LDs, such as osteoporosis, in humans.
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  • 文章类型: Journal Article
    2019年冠状病毒病(COVID-19)大流行对全球公共卫生构成了巨大威胁。迄今为止,许多回顾性研究和病例报告表明,严重COVID-19与多器官疾病之间存在关联。然而,对这一现象背后因果机制的研究既不广泛也不全面。我们使用来自严重COVID-19和与七个器官相关的疾病的全基因组关联研究(GWAS)的汇总统计数据进行了蛋白质组全孟德尔随机化(MR)研究,脾,脾肝脏,心,肾,睾丸,甲状腺,基于欧洲血统。使用的主要分析方法是径向逆方差加权(径向IVW)方法,辅以逆方差加权(IVW),加权中位数(WM),MR-Egger方法。我们的发现证实了严重COVID-19与多器官相关疾病之间的关联,比如甲状腺功能减退,严格的自身免疫(HTCBSA),甲状腺疾病(TD),和格雷夫斯病(GD)。我们还发现了某些与器官相关疾病相关的蛋白质,如超氧化物歧化酶2(SOD2)和TEK受体酪氨酸激酶(TEK),也被认为是潜在的药物靶标。实施表型扫描和敏感性分析以巩固孟德尔随机化的结果。这项研究为在未来的研究中调查COVID-19引起的疾病提供了令人信服的基础。
    The coronavirus disease 2019 (COVID-19) pandemic poses an enormous threat to public health worldwide. Many retrospective studies and case reports to date have shown associations between severe COVID-19 and diseases of multi-organs. However, the research on the causal mechanisms behind this phenomenon is neither extensive nor comprehensive. We conducted a proteome-wide Mendelian randomization (MR) study using summary statistics from a Genome-Wide Association Studies (GWAS) of severe COVID-19 and diseases related to seven organs: lung, spleen, liver, heart, kidney, testis, and thyroid, based on the European ancestry. The primary analytical method used is the radial inverse variance-weighted (radial IVW) method, supplemented with the inverse variance-weighted (IVW), weighted-median (WM), MR-Egger methods. Our findings have confirmed the association between severe COVID-19 and multiple organ-related diseases, such as Hypothyroidism, strict autoimmune (HTCBSA), Thyroid disorders (TD), and Graves\' disease (GD). And we have also identified certain proteins that are associated with organ-related diseases, such as Superoxide Dismutase 2 (SOD2) and TEK Receptor Tyrosine Kinase (TEK), which are also considered potential drug targets. Phenotype scanning and sensitivity analyses were implemented to consolidate the results for Mendelian randomization. This study provides a compelling foundation for investigating COVID-19 caused diseases in future studies.
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  • 文章类型: Journal Article
    背景:人类衰老和白细胞(WBC)计数是受多种遗传因素影响的复杂性状。已经使用表观遗传时钟开发了实际年龄的预测因子。然而,表观遗传时钟和白细胞计数之间的双向因果效应尚未得到充分研究.
    方法:本研究采用孟德尔随机化(MR)分析了4个表观遗传时钟的汇总统计数据,涉及34,710名参与者。以及来自血细胞联盟的数据,包括563,946名个体。我们主要使用随机效应逆方差加权方法探索双向因果关系,补充MR方法进行综合分析。此外,应用多变量MR研究白细胞计数对表观遗传年龄加速的独立影响。
    结果:在双样本单变量MR(UVMR)分析中,根据PhenoAge,我们观察到淋巴细胞计数的减少显着加速了衰老,GrimAge,和HannumAge指标(均P<0.01,β<0),尽管它不影响内在表观遗传年龄加速(IEAA)。相反,中性粒细胞计数的增加显著提高了PhenoAge水平(β:0.38;95%CI0.14,0.61;P=1.65E-03<0.01)。反向MR显示表观遗传时钟对总体白细胞计数没有显著的因果影响。此外,在多变量MR中,淋巴细胞计数对表观遗传衰老指标的影响仍然具有统计学意义.我们还确定了中性粒细胞计数和PhenoAge之间的显著因果关系,GrimAge,和HannumAge,各自的结果显示强相关性(PhenoAgeβ:0.78;95%CI0.47,1.09;P=8.26E-07;GrimAgeβ:0.55;95%CI0.31,0.79;P=5.50E-06;HannumAgeβ:0.42;95%CI0.18,0.67;P=6.30E-04)。同样,嗜酸性粒细胞计数与HannumAge显著相关(β:0.33;95%CI0.13,0.53;P=1.43E-03<0.01)。
    结论:这些研究结果表明,在WBC中,淋巴细胞和中性粒细胞计数对PhenoAge的加速产生不可逆和独立的因果关系,GrimAge,和HannumAge.我们的发现强调了WBC在影响表观遗传时钟中的关键作用,并强调了在解释表观遗传年龄时考虑免疫参数的重要性。
    BACKGROUND: Human aging and white blood cell (WBC) count are complex traits influenced by multiple genetic factors. Predictors of chronological age have been developed using epigenetic clocks. However, the bidirectional causal effects between epigenetic clocks and WBC count have not been fully examined.
    METHODS: This study employed Mendelian randomization (MR) to analyze summary statistics from four epigenetic clocks involving 34,710 participants, alongside data from the Blood Cell Consortium encompassing 563,946 individuals. We primarily explored bidirectional causal relationships using the random-effects inverse-variance weighted method, supplemented by additional MR methods for comprehensive analysis. Additionally, multivariate MR was applied to investigate independent effects of WBC count on epigenetic age acceleration.
    RESULTS: In the two-sample univariate MR (UVMR) analysis, we observed that a decrease in lymphocyte count markedly accelerated aging according to the PhenoAge, GrimAge, and HannumAge metrics (all P < 0.01, β < 0), though it did not affect Intrinsic Epigenetic Age Acceleration (IEAA). Conversely, an increase in neutrophil count significantly elevated PhenoAge levels (β: 0.38; 95% CI 0.14, 0.61; P = 1.65E-03 < 0.01). Reverse MR revealed no significant causal impacts of epigenetic clocks on overall WBC counts. Furthermore, in multivariate MR, the impact of lymphocyte counts on epigenetic aging metrics remained statistically significant. We also identified a marked causal association between neutrophil counts and PhenoAge, GrimAge, and HannumAge, with respective results showing strong associations (PhenoAge β: 0.78; 95% CI 0.47, 1.09; P = 8.26E-07; GrimAge β: 0.55; 95% CI 0.31, 0.79; P = 5.50E-06; HannumAge β: 0.42; 95% CI 0.18, 0.67; P = 6.30E-04). Likewise, eosinophil cell count demonstrated significant association with HannumAge (β: 0.33; 95% CI 0.13, 0.53; P = 1.43E-03 < 0.01).
    CONCLUSIONS: These findings demonstrated that within WBCs, lymphocyte and neutrophil counts exert irreversible and independent causal effects on the acceleration of PhenoAge, GrimAge, and HannumAge. Our findings highlight the critical role of WBCs in influencing epigenetic clocks and underscore the importance of considering immune parameters when interpreting epigenetic age.
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  • 文章类型: Journal Article
    背景:端粒缩短和表观遗传修饰是衰老和血液病的关键因素。这项研究调查了端粒长度和表观遗传年龄加速(EAA)与血液肿瘤的关系,血细胞,和表观遗传时钟的生化标记。
    方法:本研究主要利用欧洲血统人群的全基因组关联研究作为工具变量,通过双向双样本孟德尔随机化(MR)方法探索暴露与结局之间的因果关系.MR技术包括逆方差加权(IVW),Egger先生,和加权中位数模式。使用CochranQ检验和MREgger截距评估MR中的异质性和多效性,多变量MR(MVMR)进一步验证了结论的稳健性。
    结果:我们的研究表明,端粒长度延长会显著增加多发性骨髓瘤的风险,白血病,和淋巴瘤(OR>1,P<0.05),并建立端粒长度与红细胞指数如红细胞之间的因果关系(OR=1.121,PIVW=0.034),MCH(OR=0.801,PIVW=2.046e-06),MCV(OR=0.801,PIVW=0.001),和MCHC(OR=0.813,PIVW=0.002)。此外,MVMR分析显示DNA甲基化PhenoAge加速与碱性磷酸酶之间存在关联(OR=1.026,PIVW=0.007)。
    结论:该研究阐明了端粒长度与端粒长度之间的关系,EAA,和血液恶性肿瘤,进一步强调端粒长度和EAA的预后意义。这加深了我们对血液病发病机制的认识,这可以为风险评估和治疗策略提供信息。
    BACKGROUND: Telomere shortening and epigenetic modifications are key factors in aging and hematologic diseases. This study investigates the relationship of telomere length and epigenetic age acceleration (EAA) with hematologic cancers, blood cells, and biochemical markers through the epigenetic clocks.
    METHODS: This study primarily utilizes genome-wide association studies of populations of European descent as instrumental variables, exploring the causal relationships between exposures and outcomes through a bidirectional two-sample Mendelian randomization (MR) approach. MR techniques include inverse variance weighted (IVW), MR Egger, and weighted median modes. Heterogeneity and pleiotropy in MR are assessed using Cochran\'s Q test and the MR Egger intercept, with the robustness of the conclusions further validated by multivariable MR (MVMR).
    RESULTS: Our research shows that longer telomere lengths significantly increase the risk of multiple myeloma, leukemia, and lymphoma (OR > 1, P < 0.05) and establish a causal relationship between telomere length and red blood cell indices such as RBC (OR = 1.121, PIVW = 0.034), MCH (OR = 0.801, PIVW = 2.046e-06), MCV (OR = 0.801, PIVW = 0.001), and MCHC (OR = 0.813, PIVW = 0.002). Additionally, MVMR analysis revealed an association between DNA methylation PhenoAge acceleration and alkaline phosphatase (OR = 1.026, PIVW = 0.007).
    CONCLUSIONS: The study clarifies the relationships between telomere length, EAA, and hematological malignancies, further emphasizing the prognostic significance of telomere length and EAA. This deepens our understanding of the pathogenesis of hematological diseases, which can inform risk assessment and therapeutic strategies.
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  • 文章类型: Journal Article
    代谢综合征表现出与各种神经系统疾病的关联,其对大脑皮层的潜在影响可能是导致这些不良后果的众多潜在因素之一。在这项研究中,本研究采用孟德尔随机化分析,探讨代谢综合征与大脑皮层结构变化之间的因果关系.代谢综合征5种成分的全基因组关联研究数据来自英国生物库的欧洲血统个体。34个已知皮质功能区的全基因组关联研究数据来自ENIGMA联盟。关于阿尔茨海默病的数据,严重的抑郁症,和焦虑症从IEU开放全基因组关联研究数据库获得。代谢综合征要素与大脑皮层结构之间的因果关系使用方差逆加权进行评估,孟德尔随机化-Egger,和加权中位数技术,以方差倒数加权为主要方法。反向方差加权,孟德尔随机化Egger,加权中位数,简单模式,和加权模式方法被用来评估代谢综合征和神经系统疾病(阿尔茨海默病,严重的抑郁症,和焦虑症)。异常值,异质性,使用CochranQ检验评估多效性,MR-PRESSO,遗漏分析,和漏斗图。全球范围内,未发现代谢综合征与总皮质厚度或表面积之间存在因果关系.然而,区域性,代谢综合征可能会影响特定区域的表面积,包括尾前扣带回,postcentral,后扣带回,前扣带,峡部扣带回,上顶叶,前额叶中部,中颞叶,脑岛,parsopercularis,Cuneus,和下颞叶。它也可能影响内侧眶额的厚度,尾部中部额叶,paracentral,上额叶,上顶叶,和上边缘区域。这些发现名义上是显著的,经受住了敏感性分析,没有实质性的异质性或多效性。此外,我们发现代谢综合征与阿尔茨海默病的风险之间存在关联,严重的抑郁症,和焦虑症。这项研究表明,代谢综合征与大脑皮层结构变化之间存在潜在的关联,这可能是某些神经系统疾病的基础。此外,我们发现代谢综合征与阿尔茨海默病的风险之间存在关联,严重的抑郁症,和焦虑症。代谢综合征的早期诊断对于预防这些神经系统疾病具有重要意义。
    Metabolic syndrome exhibits associations with diverse neurological disorders, and its potential influence on the cerebral cortex may be one of the many potential factors contributing to these adverse outcomes. In this study, we aimed to investigate the causal relationship between metabolic syndrome and changes in cerebral cortex structure using Mendelian randomization analysis. Genome-wide association study data for the 5 components of metabolic syndrome were obtained from individuals of European descent in the UK Biobank. Genome-wide association study data for 34 known cortical functional regions were sourced from the ENIGMA Consortium. Data on Alzheimer\'s disease, major depression, and anxiety disorder were obtained from the IEU Open genome-wide association study database. The causal links between metabolic syndrome elements and cerebral cortex architecture were evaluated using inverse variance weighting, Mendelian randomization-Egger, and weighted median techniques, with inverse variance weighting as the primary method. Inverse variance weighting, Mendelian randomization Egger, weighted median, simple mode, and weighted mode methods were employed to assess the relationships between metabolic syndrome and neurological diseases (Alzheimer\'s disease, major depression, and anxiety disorder). Outliers, heterogeneity, and pleiotropy were assessed using Cochran\'s Q test, MR-PRESSO, leave-one-out analysis, and funnel plots. Globally, no causal link was found between metabolic syndrome and overall cortical thickness or surface area. However, regionally, metabolic syndrome may influence the surface area of specific regions, including the caudal anterior cingulate, postcentral, posterior cingulate, rostral anterior cingulate, isthmus cingulate, superior parietal, rostral middle frontal, middle temporal, insula, pars opercularis, cuneus, and inferior temporal. It may also affect the thickness of the medial orbitofrontal, caudal middle frontal, paracentral, superior frontal, superior parietal, and supramarginal regions. These findings were nominally significant and withstood sensitivity analyses, showing no substantial heterogeneity or pleiotropy. Furthermore, we found an association between metabolic syndrome and the risk of Alzheimer\'s disease, major depression, and anxiety disorder. This study suggests a potential association between metabolic syndrome and changes in cerebral cortex structure, which may underlie certain neurological disorders. Furthermore, we found an association between metabolic syndrome and the risk of Alzheimer\'s disease, major depression, and anxiety disorder. Early diagnosis of metabolic syndrome holds significance in preventing these neurological disorders.
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  • 文章类型: Journal Article
    目的:炎性细胞因子与消化系统癌症有关,然而,他们的确切因果关系仍然不确定。因此,我们进行了孟德尔随机化(MR)分析,以评估炎性细胞因子与5种常见消化系统癌症(DSC)风险之间的关系.
    方法:我们从全基因组关联研究(GWAS)收集了41种炎性细胞因子的遗传变异数据,以及芬兰数据库中五种常见疾病的结果数据。我们的主要分析方法涉及采用逆方差加权,残差和(IVW)法,在MR-Egger方法的补充下,加权中位数法,简单的模式分析,和加权模态分析作为辅助分析技术。此外,我们进行了多重敏感性分析.
    结果:肿瘤坏死因子相关凋亡诱导配体(TRAIL),巨噬细胞集落刺激因子(M-CSF),白细胞介素(IL)-18与肝细胞癌的风险呈负相关。相反,TRAIL与胃癌的风险呈负相关,而IL-16与胃癌风险呈正相关。干细胞因子(SCF)是胰腺癌的保护因子。对于结直肠癌,IL-7,IL-9,IL-13和血管内皮生长因子(VEGF)被确定为危险因素。值得注意的是,我们的结果未表明炎性细胞因子与食管癌风险之间存在显著相关性.
    结论:我们的研究通过MR分析揭示了41种炎性细胞因子与5种常见DSC风险之间的潜在联系。这些关联提供了有价值的见解,可以帮助开发诊断生物标志物和鉴定DSC的新型治疗靶标。
    OBJECTIVE: Inflammatory cytokines have been linked to digestive system cancers, yet their exact causal connection remains uncertain. Consequently, we conducted a Mendelian randomization (MR) analysis to gauge how inflammatory cytokines are linked to the risk of five prevalent digestive system cancers (DSCs).
    METHODS: We collected genetic variation data for 41 inflammatory cytokines from genome-wide association studies (GWAS), and the results data for five common diseases from the Finnish database. Our primary analytical approach involved employing the inverse-variance weighted, residual sum (IVW) method, complemented by the MR-Egger method, the weighted median method, simple mode analysis, and weighted mode analysis as supplementary analytical techniques. Furthermore, we conducted multiple sensitivity analyses.
    RESULTS: Tumor necrosis factor-related apoptosis-inducing ligand (TRAIL), macrophage colony-stimulating factor (M-CSF), and interleukin (IL)-18 showed a negative association with the risk of hepatocellular carcinoma. Conversely, TRAIL was inversely linked to the risk of gastric cancer, while IL-16 exhibited a positive correlation with gastric cancer risk. Stem cell factor (SCF) acted as a protective factor against pancreatic cancer. For colorectal cancer, IL-7, IL-9, IL-13, and vascular endothelial growth factor (VEGF) were identified as risk factors. Notably, our results did not indicate a significant correlation between inflammatory cytokines and the risk of esophageal cancer.
    CONCLUSIONS: Our research unveils potential connections between 41 inflammatory cytokines and the risk of five common DSCs through a MR analysis. These associations offer valuable insights that could aid in the development of diagnostic biomarkers and the identification of novel therapeutic targets for DSCs.
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  • 文章类型: Journal Article
    烧伤或外伤导致的肥厚性瘢痕(HS),造成美学和功能问题。然而,观察性研究将炎症细胞因子与HS联系起来,但所涉及的因果途径尚不清楚。我们旨在确定循环炎性细胞因子如何促进HS形成。双样本孟德尔随机化(MR)用于识别与肥厚性瘢痕相关的遗传变异,公开可用的全基因组关联研究(GWAS),涉及766名患者和207,482名欧洲裔对照。此外,关于91种血浆蛋白的数据来自一项纳入14,824名健康参与者的GWAS总结.主要使用逆方差加权(IVW)方法研究暴露与结果之间的因果关系。此外,一套敏感性分析,包括MR-Egger和加权中位数方法,同时被用来加强结论性发现的稳健性。最后,我们进行了反向MR分析,以评估增生性瘢痕与我们研究中确定的细胞因子之间反向因果关系的合理性.在炎症细胞因子中,有证据表明骨保护素(OPG)水平呈负相关(OR=0.59,95%CI=0.41~0.85,p=0.01),白血病抑制因子(LIF)水平(OR=0.51,95%CI=0.32~0.82,p=0.01)与增生性瘢痕风险呈负相关性,而含CUB结构域的蛋白1(CDCP1)水平(OR=0.59,95%CI=0.41~0.85,p=0.01)胶质细胞源性神经营养因子(GDNF)水平(OR=1.42,95%CI=1.03~1.96,p=0.01)和程序性细胞死亡1配体1(PD-L1)水平(OR=1.47,95%CI=1.92)与瘢痕风险呈正相关。这些关联在敏感性分析中相似。根据我们的MR发现,OPG和LIF对增生性瘢痕有保护作用,而CDCP1、GDNF、PD-L1对增生性瘢痕有增加风险的作用。我们的研究增加了目前关于特定炎症生物标志物途径在肥厚性瘢痕中的作用的知识。需要进一步验证以评估这些细胞因子作为肥厚性瘢痕预防和治疗的药理学或生活方式靶标的潜力。
    Hypertrophic scar (HS) results from burns or trauma, causing aesthetic and functional issues. However, observational studies have linked inflammatory cytokines to HS, but the causal pathways involved are unclear. We aimed to determine how circulating inflammatory cytokines contribute to HS formation. Two-sample Mendelian randomization (MR) was used to identify genetic variants associated with hypertrophic scar in a comprehensive, publicly available genome-wide association study (GWAS) involving 766 patients and 207,482 controls of European descent. Additionally, data on 91 plasma proteins were drawn from a GWAS summary involving 14,824 healthy participants. Causal relationships between exposures and outcomes were investigated primarily using the inverse variance weighted (IVW) method. Furthermore, a suite of sensitivity analyses, including MR‒Egger and weighted median approaches, were concurrently employed to fortify the robustness of the conclusive findings. Finally, reverse MR analysis was conducted to evaluate the plausibility of reverse causation between hypertrophic scar and the cytokines identified in our study. In inflammatory cytokines, there was evidence of inverse associations of osteoprotegerin(OPG) levels(OR = 0.59, 95% CI = 0.41 ∼ 0.85, p = 0.01), and leukemia inhibitory factor(LIF) levels(OR = 0.51, 95% CI = 0.32 ∼ 0.82, p = 0.01) are a nominally negative association with hypertrophic scar risk, while CUB domain-domain-containing protein 1(CDCP1) level(OR = 0.59, 95% CI = 0.41 ∼ 0.85, p = 0.01) glial cell line-derived neurotrophic factor(GDNF) levels(OR = 1.42, 95% CI = 1.03 ∼ 1.96, p = 0.01) and programmed cell death 1 ligand 1(PD-L1) levels(OR = 1.47, 95% CI = 1.92 ∼ 2.11, p = 0.04) showed a positive association with hypertrophic scar risk. These associations were similar in the sensitivity analyses. According to our MR findings, OPG and LIF have a protective effect on hypertrophic scar, while CDCP1, GDNF, and PD-L1 have a risk-increasing effect on Hypertrophic scar. Our study adds to the current knowledge on the role of specific inflammatory biomarker pathways in hypertrophic scar. Further validation is needed to assess the potential of these cytokines as pharmacological or lifestyle targets for hypertrophic scar prevention and treatment.
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  • 文章类型: Journal Article
    尽管观察性研究表明银屑病疾病(包括银屑病和银屑病关节炎)与偏头痛之间存在联系,目前尚不清楚这两种疾病之间是否存在共同的遗传病因或因果关系.我们旨在使用孟德尔随机化(MR)框架揭示遗传重叠和因果关系。遗传分析利用了来自最广泛的欧洲全基因组关联研究(GWAS)偏头痛的汇总数据。数据来自两项独立的队列研究,作为发现和验证数据集。评估了银屑病疾病和偏头痛之间的全球和区域遗传相关性,对成对GWAS分析确定的多效性区域进行了进一步注释。我们进一步应用了双样本MR多变量MR来研究它们之间的潜在因果关系。全球遗传相关性测试表明银屑病疾病与偏头痛之间的相关性较弱,而区域相关性分析描绘了银屑病和偏头痛之间的一个重要共有位点。通路富集分析显示,共有基因参与主要组织相容性和抗原加工和呈递的生物过程。就因果关系估计而言,遗传预测的银屑病(Pmeta=0.003)和银屑病关节炎(Pmeta=0.028)与偏头痛风险增加相关.多因素MR分析显示银屑病是偏头痛的独立危险因素(P<0.05)。在相反的方向上没有发现显著的关联。我们的研究支持牛皮癣对偏头痛的因果作用,以及免疫调节病因学的核心作用。这些发现对银屑病患者偏头痛的治疗和临床实践具有重要意义。
    Despite observational studies suggesting a link between psoriatic disease (including psoriasis and psoriatic arthritis) and migraine, it is unclear whether there is a shared genetic etiology or a causal relationship between the two conditions. We aimed to reveal the genetic overlap and causality using the Mendelian randomization (MR) framework. The genetic analysis utilized summary data from the most extensive European genome-wide association study (GWAS) of migraine. Well-powered psoriatic disease GWAS data were obtained from two independent cohort studies, which served as discovery and validation datasets. Global and regional genetic correlations between psoriatic disease and migraine were assessed, and pleiotropic regions identified by pairwise GWAS analysis were further annotated. We further applied a two-sample MR multivariate MR to investigate the potential causal relationship between them. The global genetic correlation test indicated weak correlations between psoriatic disease and migraine, while regional correlation analyses delineated one significant shared locus between psoriasis and migraine. Pathway enrichment analysis revealed that shared genes were involved biological processes to the major histocompatibility and antigen processing and presentation. In terms of causality estimates, genetically predicted psoriasis (Pmeta = 0.003) and psoriatic arthritis (Pmeta = 0.028) were associated with an increased risk of migraine. Multivariate MR analysis indicated that psoriasis was an independent risk factor for migraine (P < 0.05). No significant associations were found in the reverse direction. Our study supported the causal role of psoriasis on migraine, and the central role for immunomodulatory etiology. These findings have significant implications for the management of migraine and clinical practice in patients with psoriasis.
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  • 文章类型: Journal Article
    观察性流行病学研究表明,哮喘和败血症之间存在潜在的关联,尽管这两个条件之间的因果关系仍然不确定。为了进一步调查这种关系,本研究利用孟德尔随机化(MR)分析方法来探索哮喘与各种类型脓毒症之间的潜在联系.
    在大规模的全基因组关联研究中,选择与哮喘相关的单核苷酸多态性(SNPs)作为辅助变量.三种方法,包括逆方差加权(IVW),MR-Egger回归,和加权中位数用于评估哮喘和脓毒症之间的因果关系.比值比(OR)和95%置信区间(CI)作为因果关系的评价指标,并进行敏感性分析以评估多效性和仪器有效性。最后,我们进行了反向MR分析,以调查脓毒症和哮喘之间是否存在因果关系.
    我们发现哮喘与脓毒症风险增加呈正相关(OR=1.18,P<0.05),链球菌败血症(OR=1.23,P=0.04),肺炎相关性脓毒症(OR=1.57,P<0.05),肺炎球菌性败血症(OR=1.58,P=0.01),其他脓毒症(OR=1.15,P<0.05),重症监护病房(ICU)中的脓毒症(OR=1.23,P=0.02)。敏感性分析显示结果一致,没有异质性或多效性。反向MR分析显示各种类型的败血症和哮喘之间没有因果关系。
    我们的研究表明哮喘与不同类型的败血症之间存在因果关系。这些发现表明,医疗保健提供者关注哮喘患者败血症的潜在风险并及时实施适当的预防和干预措施的重要性。
    UNASSIGNED: Observational epidemiological studies have indicated a potential association between asthma and sepsis, although the causal relationship between these 2 conditions remains uncertain. To further investigate this relationship, the present study utilized Mendelian randomization (MR) analysis approach to explore the potential links between asthma and various types of sepsis.
    UNASSIGNED: In a large-scale genome-wide association study, single nucleotide polymorphisms (SNPs) associated with asthma were selected as instrumental variables. Three methods, including inverse-variance weighted (IVW), MR-Egger regression, and weighted median were used to assess the causal relationship between asthma and sepsis. The odds ratio (OR) and 95% confidence interval (CI) were used as the evaluation metrics for causal relationships, and sensitivity analysis was conducted to assess pleiotropy and instrument validity. Finally, a reverse MR analysis was conducted to investigate whether there is a causal relationship between sepsis and asthma.
    UNASSIGNED: We found a positive association between asthma and an increased risk of sepsis (OR=1.18, P<0.05), streptococcal sepsis (OR=1.23, P=0.04), pneumonia-related sepsis (OR=1.57, P<0.05), pneumococcal sepsis (OR=1.58, P=0.01), other sepsis (OR=1.15, P<0.05), and sepsis in intensive care unit (ICU) settings (OR=1.23, P=0.02). Sensitivity analysis showed consistent results without heterogeneity or pleiotropy. The reverse MR analysis reveals no causal relationship between various types of sepsis and asthma.
    UNASSIGNED: Our study demonstrates a causal relationship between asthma and different types of sepsis. These findings suggest the importance of healthcare providers paying attention to the potential risk of sepsis in asthma patients and implementing appropriate preventive and intervention measures in a timely manner.
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