Cadherins

钙粘蛋白
  • 文章类型: Journal Article
    上皮-间充质转化(EMT)是指在特定的生理或病理条件下,极性上皮细胞向活动的间充质细胞转化,从而促进癌细胞的转移。上皮钙粘蛋白(E-cadherin)是一种在肿瘤细胞运动性的获得中起重要作用的蛋白质,并且作为关键的EMT上皮标志物。在本研究中,AW01178,一种具有潜在治疗功效的小分子化合物,通过以E-cadherin为靶标的细胞内Western高通量筛选技术进行鉴定。该化合物在mRNA和蛋白质水平上诱导E-cadherin的上调,并在体外和体内抑制乳腺癌细胞的EMT。机械上,AW01178是一种新型的苯并乙酰胺组蛋白脱乙酰酶抑制剂(HDACi),主要针对I类组蛋白脱乙酰酶。AW01178通过增强E-cadherin启动子区组蛋白H3的乙酰化水平促进E-cadherin的转录和表达,从而抑制乳腺癌细胞的转移。集体发现支持了本研究中确定的新型HDACi化合物的潜在用途,AW01178,作为乳腺癌的治疗药物,突出了其未来发展HDACi结构作为抗癌药物的价值。
    Epithelial-mesenchymal transition (EMT) refers to the transformation of polar epithelial cells into motile mesenchymal cells under specific physiological or pathological conditions, thus promoting the metastasis of cancer cells. Epithelial cadherin (E-cadherin) is a protein that plays an important role in the acquisition of tumor cell motility and serves as a key EMT epithelial marker. In the present study, AW01178, a small-molecule compound with potential therapeutic efficacy, was identified via in-cell Western high-throughput screening technology using E-cadherin as the target. The compound induced the upregulation of E-cadherin at both mRNA and protein levels and inhibited the EMT of breast cancer cells in vitro as well as metastasis in vivo. Mechanistically, AW01178 is a novel benzacetamide histone deacetylase inhibitor (HDACi) mainly targeting class I histone deacetylases. AW01178 promoted the transcription and expression of E-cadherin through enhancing the acetylation level of histone H3 in the E-cadherin promoter region, thereby inhibiting the metastasis of breast cancer cells. The collective findings support the potential utility of the novel HDACi compound identified in this study, AW01178, as a therapeutic drug for breast cancer and highlight its value for the future development of HDACi structures as anticancer drugs.
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  • 文章类型: Journal Article
    E-cadherin(Cdh1)功能受损与细胞去分化密切相关。浸润性肿瘤生长和转移,尤其是胃癌。I类致癌物幽门螺杆菌(H.幽门螺杆菌)定植胃上皮细胞并诱导Cdh1脱落,其主要由分泌的细菌蛋白酶高温需求A(HtrA)介导。在这项研究中,我们使用来自不同健康供体的胃组织和粘膜组织的人原代上皮细胞系来研究HtrA介导的Cdh1裂解以及随后在非肿瘤性背景下对细菌发病机理的影响。我们发现2D原代细胞和粘膜中HtrA诱导的胞外域裂解对Cdh1功能的严重损害。由于粘液体表现出完整的顶端基底极性,我们研究了细菌跨单层的迁移,它被HtrA部分去极化,如显微镜所示,跨上皮电阻(TEER)和集落形成单位(cfu)测定的分析。最后,我们研究了CagA注射,并观察到2D原代细胞中有效的CagA易位和酪氨酸磷酸化,在较小程度上,类似的效果在粘液类。总之,HtrA是促进幽门螺杆菌在未转化的原代胃上皮细胞和基于器官的上皮模型中的多步骤发病的至关重要的因素。
    Impaired E-cadherin (Cdh1) functions are closely associated with cellular dedifferentiation, infiltrative tumor growth and metastasis, particularly in gastric cancer. The class-I carcinogen Helicobacter pylori (H. pylori) colonizes gastric epithelial cells and induces Cdh1 shedding, which is primarily mediated by the secreted bacterial protease high temperature requirement A (HtrA). In this study, we used human primary epithelial cell lines derived from gastroids and mucosoids from different healthy donors to investigate HtrA-mediated Cdh1 cleavage and the subsequent impact on bacterial pathogenesis in a non-neoplastic context. We found a severe impairment of Cdh1 functions by HtrA-induced ectodomain cleavage in 2D primary cells and mucosoids. Since mucosoids exhibit an intact apico-basal polarity, we investigated bacterial transmigration across the monolayer, which was partially depolarized by HtrA, as indicated by microscopy, the analyses of the transepithelial electrical resistance (TEER) and colony forming unit (cfu) assays. Finally, we investigated CagA injection and observed efficient CagA translocation and tyrosine phosphorylation in 2D primary cells and, to a lesser extent, similar effects in mucosoids. In summary, HtrA is a crucially important factor promoting the multistep pathogenesis of H. pylori in non-transformed primary gastric epithelial cells and organoid-based epithelial models.
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  • 文章类型: Journal Article
    在发育中的人脑中,只有53个随机表达的簇状原钙粘蛋白(cPcdh)同工型使单个神经元的神经突能够识别和自我避免,同时与其他神经元的神经突保持接触。细胞实验表明,只有当所有cPcdh同工型在细胞边界上完全匹配时,才会发生自我识别。cPcdh表达谱中的单个错配干扰识别。目前还不清楚,然而,相邻细胞之间的单个不匹配同工型如何足以阻止错误的识别。使用系统的细胞聚集实验,我们表明,消除cPcdh相互作用在相同的膜(顺式)导致细胞之间的特异性组合结合(反式)的完全丧失。我们的计算机模拟表明,线性阵列低聚物中cPcdh的组织,由顺式和反式相互作用组成,通过增加同型膜之间cPcdh反式复合物的浓度和稳定性来增强自我识别。重要的是,我们发现细胞间错配同工型的存在会显著降低反式复合物的浓度和稳定性。总的来说,我们解释了cPcdh组装排列在神经元自我/非自我区分中的作用,这些神经元自我回避。
    In the developing human brain, only 53 stochastically expressed clustered protocadherin (cPcdh) isoforms enable neurites from individual neurons to recognize and self-avoid while simultaneously maintaining contact with neurites from other neurons. Cell assays have demonstrated that self-recognition occurs only when all cPcdh isoforms perfectly match across the cell boundary, with a single mismatch in the cPcdh expression profile interfering with recognition. It remains unclear, however, how a single mismatched isoform between neighboring cells is sufficient to block erroneous recognitions. Using systematic cell aggregation experiments, we show that abolishing cPcdh interactions on the same membrane (cis) results in a complete loss of specific combinatorial binding between cells (trans). Our computer simulations demonstrate that the organization of cPcdh in linear array oligomers, composed of cis and trans interactions, enhances self-recognition by increasing the concentration and stability of cPcdh trans complexes between the homotypic membranes. Importantly, we show that the presence of mismatched isoforms between cells drastically diminishes the concentration and stability of the trans complexes. Overall, we provide an explanation for the role of the cPcdh assembly arrangements in neuronal self/non-self-discrimination underlying neuronal self-avoidance.
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  • DOI:
    文章类型: Journal Article
    UNASSIGNED: Detecting oral lesions at high risk of becoming cancer may enable early interventions to prevent oral cancer. The diagnosis of dysplasia in an oral lesion is used to predict this risk but is subject to interobserver and intraobserver variability. Studying biomarkers or molecular markers that reflect underlying molecular alterations can serve as an additional and objective method of risk assessment. E-cadherin and beta-catenin, molecular markers of epithelial-mesenchymal transition (EMT), potentially contribute to early malignant progression in oral tissue. This narrative review provides an overview of EMT, its relation to oral cancer, and the interaction among E-cadherin, beta-catenin, and the Wnt pathway in malignant progression of oral tissue.
    UNASSIGNED: Full-text literature on EMT, E-cadherin, beta-catenin, oral epithelial dysplasia, and oral cancer was retrieved from PubMed and Google Scholar.
    UNASSIGNED: Sixty original research articles, reviews, and consensus statements were selected for review.
    UNASSIGNED: EMT, a biological mechanism characterized by epithelial and mesenchymal changes, can contribute to cancer development. Molecular markers of EMT including TWIST, vimentin, and N-cadherin may serve as prognostic markers of oral cancer. Dependent on Wnt pathway activity and the loss of membranous E-cadherin, E-cadherin and beta-catenin can play various roles along the spectrum of malignant progression, including tumour inhibition, early tumour progression, and late-stage tumour progression. Cross-sectional immunohistochemical research has found changes in expression patterns of E-cadherin and beta-catenin from normal oral tissue, oral epithelial dysplasia, to oral squamous cell carcinoma.
    UNASSIGNED: Future research should explore the longitudinal role of EMT markers in predicting malignant progression in oral tissue.
    UNASSIGNED: La détection de lésions buccales présentant un risque élevé d’évoluer en cancer peut permettre des interventions précoces pour prévenir le cancer de la bouche. Le diagnostic de dysplasie dans le cas de lésions buccales sert à prédire ce risque, mais il est soumis à une variabilité d’un observateur à l’autre et avec le même observateur. L’étude de marqueurs biologiques ou de marqueurs moléculaires correspondant à des altérations moléculaires sous-jacentes peut constituer une méthode objective supplémentaire d’évaluation des risques. L’E-cadhérine et la bêta-caténine, des marqueurs moléculaires de la transition épithélio-mésenchymateuse (TEM), pourraient contribuer aux premières étapes de l’évolution maligne du tissu buccal. Cette revue narrative donne un aperçu de la TEM, de ses liens avec le cancer de la bouche et de l’interaction entre l’E-cadhérine, la bêta-caténine et la voie de signalisation Wnt dans l’évolution maligne du tissu buccal.
    UNASSIGNED: On a obtenu le texte intégral d’études portant sur la TEM, l’E-cadhérine, la bêta-caténine, la dysplasie épithéliale buccale et le cancer de la bouche sur PubMed et Google Scholar.
    UNASSIGNED: Soixante articles sur des études originales, des revues et des déclarations de consensus ont été sélectionnés aux fins d’examen.
    UNASSIGNED: La TEM, un mécanisme biologique caractérisé par des changements épithéliaux et mésenchymateux, peut contribuer à l’apparition d’un cancer. Les marqueurs moléculaires de la TEM, notamment TWIST, la vimentine et la N-cadhérine, peuvent servir de marqueurs pronostiques du cancer de la bouche. En fonction de l’activité de la voie de signalisation Wnt et de la perte de l’E-cadhérine membraneuse, l’E-cadhérine et la bêta-caténine peuvent jouer divers rôles dans le spectre de l’évolution maligne, notamment l’inhibition tumorale, la progression tumorale précoce et l’évolution tumorale avancée. Des études transversales d’immunohistochimie ont révélé des changements dans les modèles d’expression de l’E-cadhérine et de la bêta-caténine avec le passage du tissu buccal normal, de la dysplasie épithéliale buccale au carcinome squameux de la bouche.
    UNASSIGNED: À l’avenir, des études devraient explorer le rôle longitudinal des marqueurs de la TEM dans la prévision de l’évolution maligne dans les tissus buccaux.
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  • 文章类型: English Abstract
    Objective: To investigate the role of connective tissue growth factor (CTGF) and PI3K/Akt signaling pathways in paraquat (PQ) -induced alterations in alveolar epithelial cell mesenchymalization (EMT) . Methods: In February 2023, RLE-6TN cells were divided into 2 groups, which were set as uncontaminated group and contaminated group (200 μmol/L PQ), and cellular EMT alteration, CTGF and PI3K/Akt signaling pathway related molecules expression were detected by cell scratch assay, qRT-PCR and western-blot assay. Using shRNA interference technology to specifically inhibit the expression of CTGF, RLE-6TN cells were divided into four groups: control group, PQ group (200 μmol/L PQ), interference group (transfected with a plasmid with shRNA-CTGF+200 μmol/L PQ), and null-loaded group (transfected with a plasmid with scramble- CTGF+200 μmol/L PQ), qRT-PCR and western blot were used to examine the alteration of the cellular EMT and the expression of molecules related to the activity of PI3K/Akt pathway. The PI3K/Akt signaling pathway was blocked by the PI3K inhibitor LY294002, and the expression of EMT-related molecules in cells of the control group, PQ group (200 μmol/L PQ), and inhibitor group (200 μmol/L PQ+20 μmol/L LY294002) was examined by qRT-PCR and western blot.The t-test was used to compare the differences between the two groups, while the analysis of variance (ANOVA) was applied to compare the differences among multiple groups. For further pairwise comparisons, the Bonferroni method was adopted. Results: The results of cell scratch test showed that compared with the uncontaminated group, RLE-6TN cells in the contaminated group had faster migration rate, lower mRNA and protein expression levels of E-Cadherin, and higher mRNA and protein expression levels of α-SMA, CTGF, PI3K and Akt, with statistical significance (P<0.05). After specific inhibition of CTGF expression, the mRNA and protein expression of CTGF, PI3K, Akt, and α-SMA in the cells of the interference group were significantly lower than that of the PQ group and the null-loaded group (P<0.05/6), whereas that of E-Cadherin was higher than that of the PQ group and the null-loaded group (P<0.05/6). Specifically blocking the PI3K/Akt signaling pathway, the mRNA and protein expression of PI3K, Akt and α-SMA in the cells of the inhibitor group was decreased compared with that of the PQ group (P<0.05/3), while the expression of E-Cadherin was elevated compared with that of the PQ group (P<0.05/3) . Conclusion: CTGF may promote PQ-induced alveolar epithelial cell EMT through activation of the PI3K/Akt signaling pathway. Inhibition of CTGF expression or blockade of PI3K/Akt signaling pathway activity can alleviate the extent of PQ-induced alveolar epithelial cell EMT.
    目的: 探讨结缔组织生长因子(CTGF)及磷脂酰肌醇3-激酶/丝氨酸/苏氨酸激酶(PI3K/Akt)信号通路在百草枯(PQ)致肺泡上皮细胞上皮-间充质化(EMT)改变的作用。 方法: 于2023年2月,将RLE-6TN细胞分成2组,设为未染毒组和染毒组(200 μmol/L PQ),采用细胞划痕实验、qRT-PCR和Western-blot法检测细胞EMT改变、CTGF及PI3K/Akt信号通路相关分子表达情况。利用shRNA干扰技术特异性抑制CTGF的表达,将RLE-6TN细胞分成4组,分别为对照组、PQ组(200 μmol/L PQ)、干扰组(转染含shRNA-CTGF质粒+200 μmol/L PQ)和空载组(转染含CTGF-scramble质粒+200 μmol/L PQ),qRT-PCR和Western-blot法检测细胞EMT改变及PI3K/Akt通路活性相关分子的表达情况。使用PI3K抑制剂LY294002阻断PI3K/Akt信号通路,运用qRT-PCR和Western-blot法检测对照组、PQ组(200 μmol/L PQ)、抑制剂组(200 μmol/L PQ+20 μmol/L LY294002)细胞EMT相关分子表达情况。两组间差异比较采用t检验,多组间差异比较采用方差分析,进一步两两比较采用Bonferroni法。 结果: 细胞划痕实验结果显示,与未染毒组比较,PQ染毒组RLE-6TN细胞迁移速度更快,E-钙黏蛋白(E-Cadherin)的mRNA和蛋白表达量更低,α-平滑肌肌动蛋白(α-SMA)、CTGF、PI3K、Akt的mRNA和蛋白表达量更高,差异均有统计学意义(P<0.05)。特异性抑制CTGF表达后,干扰组细胞CTGF、PI3K、Akt、α-SMA的mRNA和蛋白表达量明显低于PQ组和空载组(P<0.05/6),E-Cadherin的mRNA和蛋白表达量高于PQ组和空载组(P<0.05/6)。特异性阻断PI3K/Akt信号通路,抑制剂组细胞PI3K、Akt和α-SMA的mRNA和蛋白表达量较PQ组降低(P<0.05/3),E-Cadherin表达量较PQ组升高(P<0.05/3)。 结论: CTGF可能通过激活PI3K/Akt信号通路促进PQ致肺泡上皮细胞EMT改变,抑制CTGF的表达或阻断PI3K/Akt信号通路活性,可减轻PQ所致肺泡上皮细胞EMT的程度。.
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  • 文章类型: Journal Article
    目的:RNA结合蛋白(QKI)与多种肿瘤抑制因子的发生发展有关。然而,QKI表达的临床意义尚未完全阐明.在这项研究中,我们旨在探讨QKI在肝细胞癌(HCC)中的表达及其临床病理和预后意义。
    方法:我们执行了QKI,锌指E盒结合homeobox1(ZEB1),E-cadherin,和谷胱甘肽过氧化物酶4(GPX4)对166例HCC患者组织样本进行免疫组织化学染色。使用X-tile生物信息学软件设置高QKI表达的截止值。评估了QKI表达与各种临床病理参数之间的相关性。
    结果:高QKI表达的最佳截断值为12.5。在166例患者中有28例(16.9%)观察到高QKI表达,并且是劣质无复发生存率(RFS)的独立预后因素。此外,ZEB1和GPX4高表达与QKI高表达相关,但不与E-cadherin表达的丧失有关。
    结论:在HCC中发现高QKI表达,并与不良RFS相关。QKI可能是与上皮-间质转化相关的HCC的预后生物标志物和潜在的候选治疗靶标。
    OBJECTIVE: The RNA binding protein quaking (QKI) is associated with the development and progression of tumor suppressors in various cancers. However, the clinical implications of QKI expression have not yet been fully elucidated. In this study, we aimed to investigate the clinicopathological and prognostic significance of QKI expression in hepatocellular carcinoma (HCC).
    METHODS: We performed QKI, Zinc finger E-box-binding homeobox 1 (ZEB1), E-cadherin, and glutathione peroxidase 4 (GPX4) immunohistochemical staining on 166 HCC patient tissue samples. X-tile bioinformatics software was used to set the cut-off value for high QKI expression. Correlations between QKI expression and various clinicopathological parameters were assessed.
    RESULTS: The best cut-off value for high QKI expression was 12.5. High QKI expression was observed in 28 of 166 patients (16.9%) and was an independent prognostic factor for inferior recurrence-free survival (RFS). In addition, high ZEB1 and GPX4 expression correlated with high QKI expression, but not with the loss of E-cadherin expression.
    CONCLUSIONS: High QKI expression was identified in HCCs and associated with poor RFS. QKI might be a prognostic biomarker of HCCs associated with epithelial-to-mesenchymal transition and a potential candidate therapeutic target.
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  • 文章类型: Journal Article
    结直肠癌(CRC)是全球癌症相关死亡率的第三大常见恶性肿瘤。上皮-间质转化(EMT)促进癌症转移,基于肿瘤的格拉斯哥EMT评分与不良临床特征和不良预后相关。在这项研究中,使用由E-cadherin(E-cad)组成的五种基于肿瘤的EMT标志物的影响,β-连环蛋白(β-cat),蜗牛,研究了Zeb-1和Fascin联合基质骨膜素(PN)对预测CRC患者预后的影响。研究了202例CRC患者福尔马林固定石蜡包埋组织中E-cad的表达,β-cat,蜗牛,Zeb-1,Fascin,和PN通过免疫组织化学。个别地,细胞质血管素(Fc),细胞质蜗牛(Sc),核蜗牛(Sn),基质蜗牛(Ss),和基质PN(Ps)与生存率降低显着相关。Ps与Fc的组合,Fs,和Sn在2种模式中观察到,包括组合Fc,Fs,和Ps(FcFsPs)和Fc,Sn,和Ps(FcSnPs)。与个体EMT标志物相比,这些组合增强了预后能力,并且是独立的预后标志物。由于先前建立的评分方法需要五个标记和严格的标准,其临床应用可能有限。因此,使用这些新的联合预后标志物,FcFsPs或FcSnPs,可能有助于预测CRC患者的预后。
    Colorectal cancer (CRC) is the third most common malignancy cause of cancer-related mortality worldwide. Epithelial-mesenchymal transition (EMT) promotes cancer metastasis and a tumour-based Glasgow EMT score was associated with adverse clinical features and poor prognosis. In this study, the impact of using the established five tumour-based EMT markers consisting of E-cadherin (E-cad), β-catenin (β-cat), Snail, Zeb-1, and Fascin in combination with the stromal periostin (PN) on the prediction of CRC patients\' prognosis were invesigated. Formalin-fixed paraffin-embedded tissues of 202 CRC patients were studies the expressions of E-cad, β-cat, Snail, Zeb-1, Fascin, and PN by immunohistochemistry. Individually, cytoplasmic Fascin (Fc), cytoplasmic Snail (Sc), nuclear Snail (Sn), stromal Snail (Ss), and stromal PN (Ps) were significantly associated with reduced survival. A combination of Ps with Fc, Fs, and Sn was observed in 2 patterns including combined Fc, Fs, and Ps (FcFsPs) and Fc, Sn, and Ps (FcSnPs). These combinations enhanced the prognostic power compared to individual EMT markers and were independent prognostic markers. As the previously established scoring method required five markers and stringent criteria, its clinical use might be limited. Therefore, using these novel combined prognostic markers, either FcFsPs or FcSnPs, may be useful in predicting CRC patient outcomes.
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  • 文章类型: Journal Article
    大约一半的儿童慢性肾病(CKD)病例是由先天性肾脏和泌尿道异常(CAKUT)引起的。特定的基因被鉴定为对于导致CAKUT表型的潜在遗传因素具有重要意义。在我们的研究中,我们专注于分析和比较外生体异常蛋白A2受体(EDA2R)的表达水平,protocadherin9(PCDH9),和TNF受体相关因子7(TRAF7)蛋白在健康对照肾脏的皮质和髓质在发育2,3和4阶段。我们还对健康胚胎和胎儿肾脏的皮质和髓质切片中提到的蛋白质的面积百分比进行了分析,与受CAKUT影响的那些相比,包括双肾(DK),马蹄肾(香港),发育不良的肾脏(HYP),和发育不良的肾脏(DYS)。我们发现CAKUT候选基因蛋白EDA2R,PCDH9和TRAF7都在正常人肾脏发育阶段表达。在DYS中,EDA2R的表达高于正常肾脏,可能是由于EDA2R在细胞凋亡中的作用,在特定情况下上调,可能有助于DYS的形成。PCDH9在HK中的表达较低,这可以归因于PCDH9在细胞迁移抑制中的可能作用。PCDH9表达减少与细胞迁移增加有关,有可能为香港的发展做出贡献。与正常肾脏相比,所有检查的肾脏疾病中的TRAF7表达水平均降低,这表明这种减少可能归因于TRAF7在内皮和纤毛形成中的关键作用,两者都是正常肾脏发育所必需的。需要进一步的研究来确定这些蛋白质在肾脏和CAKUT的典型发育中的功能。
    Approximately half of the cases of chronic kidney disease (CKD) in childhood are caused by congenital anomalies of the kidney and urinary tract (CAKUT). Specific genes were identified as having significant importance in regard to the underlying genetic factors responsible for the CAKUT phenotype, and in our research, we focused on analyzing and comparing the expression levels of ectodysplasin A2 receptor (EDA2R), protocadherin9 (PCDH9), and TNF receptor-associated factor 7 (TRAF7) proteins in the cortex and medulla of healthy control kidneys during developmental phases 2, 3, and 4. We also performed an analysis of the area percentages of the mentioned proteins in the cortical and medullary sections of healthy embryonic and fetal kidneys compared to those affected by CAKUT, including duplex kidneys (DK), horseshoe kidneys (HK), hypoplastic kidneys (HYP), and dysplastic kidneys (DYS). We found that the CAKUT candidate gene proteins EDA2R, PCDH9, and TRAF7 are all expressed during normal human kidney development stages. In DYS, the expression of EDA2R was higher than in normal kidneys, likely due to EDA2R\'s role in apoptosis, which was upregulated in specific cases and could possibly contribute to the formation of DYS. The expression of PCDH9 was lower in HK, which can be attributed to the possible role of PCDH9 in cell migration suppression. Decreased PCDH9 expression is linked to increased cell migration, potentially contributing to the development of HK. The level of TRAF7 expression was reduced in all examined kidney disorders compared to normal kidneys, suggesting that this reduction might be attributed to the crucial role of TRAF7 in the formation of endothelium and ciliogenesis, both of which are essential for normal kidney development. Further research is required to ascertain the function of these proteins in both the typical development of the kidney and in CAKUT.
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  • 文章类型: Journal Article
    人类基因组中的调谐直向同源物仅包含19,872个蛋白质编码基因中的84个基因和16,528个非编码基因中的23个,但它们却站在Olfactores进化枝的底部,辐射产生数千种被膜动物和脊椎动物。这些基因中有哪些强大的驱动因素促成了这一过程?许多这些直系同源物存在于基因家族中。我们讨论了每个家庭的生物学作用以及直系同源物对家庭的定量贡献。最重要的是第二种钙粘蛋白的进化。这个,一种II型钙黏着蛋白,具有从表达I型类别的细胞中分离含有该钙黏着蛋白的细胞的性质。这种II型钙粘蛋白的集合现在可以脱离并远离它们的I型邻居,这个过程最终会演变成神经峰的形成,“第四胚层”,为进一步的进化发明提供了广泛的可能性。第二个重要贡献是对肌肉和神经蛋白以及视觉感知工具包的广泛开发的关键补充。机动性和视野方面的这些发展为Vertebrata的有效掠夺性能力的发展提供了基础。
    Tunicate orthologs in the human genome comprise just 84 genes of the 19,872 protein-coding genes and 23 of the 16,528 non-coding genes, yet they stand at the base of the Olfactores clade, which radiated to generate thousands of tunicate and vertebrate species. What were the powerful drivers among these genes that enabled this process? Many of these orthologs are present in gene families. We discuss the biological role of each family and the orthologs\' quantitative contribution to the family. Most important was the evolution of a second type of cadherin. This, a Type II cadherin, had the property of detaching the cell containing that cadherin from cells that expressed the Type I class. The set of such Type II cadherins could now detach and move away from their Type I neighbours, a process which would eventually evolve into the formation of the neural crest, \"the fourth germ layer\", providing a wide range of possibilities for further evolutionary invention. A second important contribution were key additions to the broad development of the muscle and nerve protein and visual perception toolkits. These developments in mobility and vision provided the basis for the development of the efficient predatory capabilities of the Vertebrata.
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  • 文章类型: Journal Article
    识别新的表观遗传生物标志物是改善乳腺癌患者临床管理的有希望的方法。我们的研究旨在确定25个肿瘤抑制基因(TSG)的甲基化模式,并在诊断为浸润性导管癌(IDC)的斯洛伐克患者队列中选择与临床病理特征相关的最佳甲基化生物标志物。总的来说,166福尔马林固定,本研究包括从IDC患者获得的石蜡包埋(FFPE)组织.使用半定量甲基化特异性MLPA(MS-MLPA)分析TSG启动子区的甲基化状态。我们确定CDH13是我们队列患者中最常见的甲基化基因。通过ddPCR的进一步分析证实了CDH13启动子区中甲基化水平的增加。在IDC分子亚型LUMA与HER2(P=0.0116)和HER2与TNBC(P=0.0234)之间观察到CDH13甲基化水平的显著差异。此外,在HER2+与HER2-肿瘤(P=0.0004)和PR-与PR+肿瘤(P=0.0421)中检测到显著更高的甲基化。我们的结果提供了证据,表明CDH13甲基化的改变与斯洛伐克IDC患者队列的临床病理特征有关。此外,使用ddPCR作为甲基化敏感方法代表了一种有前途的方法,其特征在于与其他常规方法(如MS-MLPA)相比,更高的精度和技术简单性来测量CDH13中靶CpG的甲基化。
    Identifying novel epigenetic biomarkers is a promising way to improve the clinical management of patients with breast cancer. Our study aimed to determine the methylation pattern of 25 tumor suppressor genes (TSG) and select the best methylation biomarker associated with clinicopathological features in the cohort of Slovak patients diagnosed with invasive ductal carcinoma (IDC). Overall, 166 formalin-fixed, paraffin-embedded (FFPE) tissues obtained from patients with IDC were included in the study. The methylation status of the promoter regions of 25 TSG was analyzed using semiquantitative methylation-specific MLPA (MS-MLPA). We identified CDH13 as the most frequently methylated gene in our cohort of patients. Further analysis by ddPCR confirmed an increased level of methylation in the promoter region of CDH13. A significant difference in CDH13 methylation levels was observed between IDC molecular subtypes LUM A versus HER2 (P = 0.0116) and HER2 versus TNBC (P = 0.0234). In addition, significantly higher methylation was detected in HER2+ versus HER2- tumors (P = 0.0004) and PR- versus PR+ tumors (P = 0.0421). Our results provide evidence that alteration in CDH13 methylation is associated with clinicopathological features in the cohort of Slovak patients with IDC. In addition, using ddPCR as a methylation-sensitive method represents a promising approach characterized by higher precision and technical simplicity to measure the methylation of target CpGs in CDH13 compared to other conventional methods such as MS-MLPA.
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