kinesin family member 5A

驱动蛋白家族成员 5A
  • 文章类型: Journal Article
    简介:驱动蛋白家族成员5A(KIF5A)是一种在神经元中表达的运动神经元蛋白,参与细胞器的顺行运输。蛋白质,RNA。干扰轴突运输的KIF5A基因变异已成为几种神经退行性疾病的一个显著特征。包括遗传性痉挛性截瘫(HSP10),Charcot-Marie-Tooth病2型(CMT2),肌萎缩侧索硬化症(ALS)。方法:在本研究中,我们实施了一种计算结构和系统生物学方法来揭示KIF5A在ALS中的作用.使用计算结构生物学方法,我们探索了非同义单核苷酸多态性(nsSNP)在KIF5A中的作用。Further,为了鉴定针对高度不稳定结构变体的潜在抑制分子,我们对接了24种与ALS有关的植物来源的植物化学物质。结果:我们发现KIF5AS291F变体显示出最多的结构不稳定行为,与野生KIF5A(-8.4Kcal/mol)相比,植物化合物“表没食子儿茶素没食子酸酯”显示出最高的结合亲和力(-9.0Kcal/mol)。Further,用系统生物学方法,我们构建了KIF5A蛋白-蛋白相互作用(PPI)网络来鉴定相关驱动蛋白家族(KIFs)蛋白,模块,和他们的功能。我们还构建了KIF5A的转录和转录后调控网络。用PPIN(度,瓶颈,亲近,和MNC)使用CytoHubba和使用网络分析仪的计算敲除实验,我们发现了KIF1A,5B,5C是重要的蛋白质。功能模块高度丰富了微管运动活动,神经元中的化学突触传递,GTP结合,和GABA受体活性。在监管网络分析中,我们发现KIF5A在转录后被miR-107下调,而miR-107在转录后被4种TF(HIF1A,PPARA,SREBF1和TP53)并被三种TF(ZEB1,ZEB2和LIN28A)下调。讨论:我们通过发现KIF5A的关键变体及其潜在的治疗靶标(表没食子儿茶素没食子酸酯)和KIF5A与重要调节因子相关的重要基因,可以解密ALS和其他神经退行性疾病的新疗法,从而结束了我们的研究。
    Introduction: Kinesin family member 5A (KIF5A) is a motor neuron protein expressed in neurons and involved in anterograde transportation of organelles, proteins, and RNA. Variations in the KIF5A gene that interfere with axonal transport have emerged as a distinguishing feature in several neurodegenerative disorders, including hereditary spastic paraplegia (HSP10), Charcot-Marie-Tooth disease type 2 (CMT2), and Amyotrophic Lateral Sclerosis (ALS). Methods: In this study, we implemented a computational structural and systems biology approach to uncover the role of KIF5A in ALS. Using the computational structural biology method, we explored the role of non-synonymous Single Nucleotide Polymorphism (nsSNPs) in KIF5A. Further, to identify the potential inhibitory molecule against the highly destabilizing structure variant, we docked 24 plant-derived phytochemicals involved in ALS. Results: We found KIF5AS291F variant showed the most structure destabilizing behavior and the phytocompound \"epigallocatechin gallate\" showed the highest binding affinity (-9.0 Kcal/mol) as compared to wild KIF5A (-8.4 Kcal/mol). Further, with the systems biology approach, we constructed the KIF5A protein-protein interaction (PPI) network to identify the associated Kinesin Families (KIFs) proteins, modules, and their function. We also constructed a transcriptional and post-transcriptional regulatory network of KIF5A. With the network topological parameters of PPIN (Degree, Bottleneck, Closeness, and MNC) using CytoHubba and computational knock-out experiment using Network Analyzer, we found KIF1A, 5B, and 5C were the significant proteins. The functional modules were highly enriched with microtubule motor activity, chemical synaptic transmission in neurons, GTP binding, and GABA receptor activity. In regulatory network analysis, we found KIF5A post-transcriptionally down-regulated by miR-107 which is further transcriptionally up-regulated by four TFs (HIF1A, PPARA, SREBF1, and TP53) and down-regulated by three TFs (ZEB1, ZEB2, and LIN28A). Discussion: We concluded our study by finding a crucial variant of KIF5A and its potential therapeutic target (epigallocatechin gallate) and KIF5A associated significant genes with important regulators which could decrypt the novel therapeutics in ALS and other neurodegenerative diseases.
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  • 文章类型: Journal Article
    胶质瘤是一种侵袭性类型的胶质瘤,其特征是侵袭性生长模式和令人沮丧的肿瘤学结果。microRNAs(miRNAs)在肿瘤发生中一直受到关注。在这里,本研究的目的是探讨含有miR-503的间充质干细胞(MSCs)来源的细胞外囊泡(EVs)在神经胶质瘤中的功能作用.收集胶质瘤患者的胶质瘤组织和相应的正常脑组织,然后定量miR-503、驱动蛋白家族成员5A(KIF5A)和白细胞介素-7(IL-7)。从骨髓MSC中分离出EV,并通过透射电子显微镜和纳米颗粒跟踪分析进行鉴定。来自miR-503模拟转染的MSC的EV,miR-503agomir,,oe-KIF5A,或sh-IL-7被递送到神经胶质瘤细胞中,以确定其对神经胶质瘤和T细胞生物学行为以及免疫抑制因子释放的影响。最后,建立了胶质瘤小鼠模型,以验证其在体内的功能。miR-503在神经胶质瘤组织中高水平表达,而KIF5A表达不佳,并被miR-503靶向。此外,在MSC-EV中加载的miR-503或上调的miR-503被证明促进神经胶质瘤细胞增殖,迁移和侵袭伴随着免疫抑制因子的促进释放。过表达的KIF5A对T细胞行为调节的影响依赖于IL-7信号通路。这样的结果在患有神经胶质瘤的小鼠中再现。总的来说,MSC-EV中掺入的miR-503作为控制神经胶质瘤免疫逃逸的调节因子的发现提供了一种新的分子见解,有望开发针对神经胶质瘤的治疗策略.
    Glioma is emerging as an aggressive type of glioma characterized by invasive growth pattern and dismal oncologic outcomes. microRNAs (miRNAs) have been attracting research attention in tumorigenesis. Herein, the aim of the current investigation was to explore the functional role of mesenchymal stem cells (MSCs)-derived extracellular vesicles (EVs) containing miR-503 in glioma. The glioma tissues and corresponding normal brain tissues were collected from patients with glioma, followed by quantification of miR-503, kinesin family member 5A (KIF5A) and interleukin-7 (IL-7). EVs were isolated from bone marrow MSCs and identified by transmission electron microscope and nanoparticle tracking analysis. EVs from miR-503 mimic-transfected MSCs, miR-503 agomir,, oe-KIF5A, or sh-IL-7 was delivered into glioma cells to determine their effects on biological behaviors of glioma and T cells as well as the release of immunosuppressive factors. Lastly, a mouse model of glioma was developed to validate the function in vivo. miR-503 was expressed at a high level in glioma tissues while KIF5A was poorly expressed and targeted by miR-503. Furthermore, miR-503 loaded in MSC-EVs or upregulated miR-503 was demonstrated to facilitate glioma cell proliferation, migration and invasion accompanied by promoted release of immunosuppressive factors. Effects of overexpressed KIF5A on T cell behavior modulation were dependent on the IL-7 signaling pathway. Such results were reproduced in mice with glioma. Collectively, the discovery of miR-503 incorporated in MSC-EVs being a regulator that controls immune escape in glioma provides a novel molecular insight that holds promises to develop therapeutic strategies against glioma.
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