Texture analysis

纹理分析
  • 文章类型: Journal Article
    目前非常需要化妆品或个性化皮肤病制剂的个性化。
    提出了24种乳化乳膏基质,自动和半自动方法,分别,并考虑了三种均质化的物理稳定性。还研究了在配方前阶段最稳定的乳膏基质的质地参数,并应用t统计检验。为了选择最优的防腐剂,NipaEster溶液的有效性为0.1%,Cosgard和Euxyl®PE9010在金黄色葡萄球菌菌株上进行了测试,铜绿假单胞菌,和白色念珠菌.
    通过所有使用的制备方法,9种奶油基质是稳定的,用Euxyl®PE9010实现保存。在纹理参数之后,在选择不同的制备方法的情况下,对于相同的配方观察到显着差异。
    配方F1,以甲基葡萄糖倍半硬脂酸酯为乳化剂,F8,以鲸蜡硬脂基葡萄糖作为乳化剂,和F14,Ceteareth-20可用作定制产品的奶油基地。
    UNASSIGNED: The individualization of cosmetic products or personalized dermatology preparations are in great demand at the present time.
    UNASSIGNED: 24 emulsifying cream bases were proposed which were prepared by the classical, automatic and semi-automatic methods, respectively, and the physical stability resulted from the three types of homogenization was taken into account. Texture parameters were also studied for the most stable cream bases in the preformulation stage and the t - statistical test was applied. In order to choose the most optimal preservative, the effectiveness of the NipaEster solution 0.1%, Cosgard and Euxyl® PE 9010 was tested on the strains of Staphylococcus aureus, Pseudomonas aeruginosa, and Candida albicans.
    UNASSIGNED: 9 cream bases were stable through all the preparation methods used, and preservation was achieved with Euxyl® PE 9010. Following the texture parameters, significant differences were observed for the same formula in the case of choosing a different preparation method.
    UNASSIGNED: Formulas F1, with methyl glucose sesquistearate as emulsifier, F8, with cetearyl glucosite as emulsifier, and F14, with Ceteareth-20 can be used as cream bases for customized products.
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  • 文章类型: Journal Article
    中风是世界上第二大死亡原因和残疾的主要原因,颈动脉粥样硬化斑块的发展通常被认为是严重脑血管事件的主要原因。近年来,新的报告强调了准确的颈动脉斑块组织病理学分析对患者的分层和正确预防并发症的作用。这项工作提出了一种无监督学习方法来分析动脉粥样硬化颈动脉斑块的复杂整片图像(WSI),以便对其最相关的特征进行简单快速的检查。为当前分析开发的所有代码均可免费获得。所提出的方法提供了定性和定量工具,以帮助病理学家更有效地检查颈动脉粥样硬化斑块的整个幻灯片图像的复杂性。然而,使用监督方法的未来研究应提供证据,证明使用提出的基于纹理的方法估计的聚类与由专家病理学家手动注释的区域之间的对应关系.
    Stroke is the second leading cause of death and a major cause of disability around the world, and the development of atherosclerotic plaques in the carotid arteries is generally considered the leading cause of severe cerebrovascular events. In recent years, new reports have reinforced the role of an accurate histopathological analysis of carotid plaques to perform the stratification of affected patients and proceed to the correct prevention of complications. This work proposes applying an unsupervised learning approach to analyze complex whole-slide images (WSIs) of atherosclerotic carotid plaques to allow a simple and fast examination of their most relevant features. All the code developed for the present analysis is freely available. The proposed method offers qualitative and quantitative tools to assist pathologists in examining the complexity of whole-slide images of carotid atherosclerotic plaques more effectively. Nevertheless, future studies using supervised methods should provide evidence of the correspondence between the clusters estimated using the proposed textural-based approach and the regions manually annotated by expert pathologists.
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  • 文章类型: Journal Article
    背景:客观的定量纹理特征可能有助于涎腺肿瘤的鉴别诊断。本研究使用机器学习(ML)来探索和验证超声(US)纹理特征在诊断唾液腺肿瘤中的表现。
    方法:122例涎腺肿瘤患者,包括71个良性肿瘤和51个恶性肿瘤,已注册。选择代表性亮度模式US图片用于进一步的灰度共生矩阵(GLCM)纹理分析。我们使用t检验来测试显著性,并使用接收器工作特性曲线方法来找到这些显著特征的最佳切点。在将80%的数据拆分为训练集和20%的数据拆分为测试集后,我们使用五种机器学习模型,k-近邻(kNN),朴素贝叶斯,Logistic回归,人工神经网络(ANN)和支持向量机(SVM),探索和验证USGLCM纹理特征在唾液腺肿瘤诊断中的表现。
    结果:这项研究包括49名女性和73名男性患者,平均年龄53岁,从21到93。我们发现六个GLCM纹理特征(对比度,反向差分运动,熵,相异,反向差异和差异熵)在良性和恶性肿瘤之间存在显着差异(p<0.05)。在ML中,总体准确率为74.3%(95CI:59.8-88.8%),94.3%(86.6-100%),72%(54-89%),kNN的84%(69.5-97.3%)和73.5%(58.7-88.4%),朴素贝叶斯,Logistic回归,单节点ANN和SVM,分别。
    结论:使用ML进行US纹理分析有可能作为客观和有价值的工具来鉴别良性和恶性唾液腺肿瘤。
    BACKGROUND: Objective quantitative texture characteristics may be helpful in salivary glandular tumor differential diagnosis. This study uses machine learning (ML) to explore and validate the performance of ultrasound (US) texture features in diagnosing salivary glandular tumors.
    METHODS: 122 patients with salivary glandular tumors, including 71 benign and 51 malignant tumors, are enrolled. Representative brightness mode US pictures are selected for further Gray Level Co-occurrence Matrix (GLCM) texture analysis. We use a t-test to test the significance and use the receiver operating characteristic curve method to find the optimal cut-point for these significant features. After splitting 80% of the data into a training set and 20% data into a testing set, we use five machine learning models, k-nearest Neighbors (kNN), Naïve Bayes, Logistic regression, Artificial Neural Networks (ANNs) and supportive vector machine (SVM), to explore and validate the performance of US GLCM texture features in diagnosing salivary glandular tumors.
    RESULTS: This study includes 49 female and 73 male patients, with a mean age of 53 years old, ranging from 21 to 93. We find that six GLCM texture features (contrast, inverse difference movement, entropy, dissimilarity, inverse difference and difference entropy) are significantly different between benign and malignant tumors (p < 0.05). In ML, the overall accuracy rates are 74.3% (95%CI: 59.8-88.8%), 94.3% (86.6-100%), 72% (54-89%), 84% (69.5-97.3%) and 73.5% (58.7-88.4%) for kNN, Naïve Bayes, Logistic regression, a one-node ANN and SVM, respectively.
    CONCLUSIONS: US texture analysis with ML has potential as an objective and valuable tool to make a differential diagnosis between benign and malignant salivary gland tumors.
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  • 文章类型: Journal Article
    背景:食道,胃食管,胃恶性肿瘤通常在局部晚期诊断,建议采用多模式治疗以增加生存机会。然而,考虑到治疗反应的显著差异,明确必须完善患者分层.这篇叙述性综述的目的是探索现有证据和影像组学在改善胃胃癌分期和预测治疗反应方面的潜力。
    方法:本文的参考文献是通过MEDLINE(PubMed)和Scopus搜索确定的,其术语为“radiomics”,\"纹理分析\",“食道癌”,“胃食管结合部癌”,“食管胃结合部癌”,“胃癌”,“胃癌”,\"暂存\",和“治疗反应”,直至2024年5月。
    结果:在所有成像方式下,Radiomics被证明可有效改善食管癌和胃癌的疾病分期和治疗反应预测(TC,MRI,和18F-FDGPET/CT)。关于影像组学应用于胃食管交界处癌的文献资料非常匮乏。与单一放射学方法相比,当整合不同的成像模式时,以及与仅使用放射组学签名相比,将临床与放射组学特征相结合时,放射组学模型表现更好。
    结论:影像组学在局部晚期胃腺癌患者的非侵入性分期和预测术前治疗反应方面具有潜力。作为未来的视角,将分子亚组分析纳入临床和影像学特征甚至可能提高这些预测和预后模型的有效性.
    BACKGROUND: Oesophageal, gastroesophageal, and gastric malignancies are often diagnosed at locally advanced stage and multimodal therapy is recommended to increase the chances of survival. However, given the significant variation in treatment response, there is a clear imperative to refine patient stratification. The aim of this narrative review was to explore the existing evidence and the potential of radiomics to improve staging and prediction of treatment response of oesogastric cancers.
    METHODS: The references for this review article were identified via MEDLINE (PubMed) and Scopus searches with the terms \"radiomics\", \"texture analysis\", \"oesophageal cancer\", \"gastroesophageal junction cancer\", \"oesophagogastric junction cancer\", \"gastric cancer\", \"stomach cancer\", \"staging\", and \"treatment response\" until May 2024.
    RESULTS: Radiomics proved to be effective in improving disease staging and prediction of treatment response for both oesophageal and gastric cancer with all imaging modalities (TC, MRI, and 18F-FDG PET/CT). The literature data on the application of radiomics to gastroesophageal junction cancer are very scarce. Radiomics models perform better when integrating different imaging modalities compared to a single radiology method and when combining clinical to radiomics features compared to only a radiomics signature.
    CONCLUSIONS: Radiomics shows potential in noninvasive staging and predicting response to preoperative therapy among patients with locally advanced oesogastric cancer. As a future perspective, the incorporation of molecular subgroup analysis to clinical and radiomic features may even increase the effectiveness of these predictive and prognostic models.
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  • 文章类型: Journal Article
    小角度X射线张量断层扫描和相关的广角X射线张量断层扫描是X射线成像技术,可以通过断层扫描重建扩展样品的各向异性散射密度。在以往的研究中,这些方法已被用于对散射密度缓慢取决于散射方向的样品进行成像,通常对方向性进行建模,即纹理,具有球面谐波扩展,直到阶次为Λ=8或更低。这项研究调查了小角度X射线张量层析成像中几种已建立的算法在样品上的性能,这些样品具有更快的随散射方向变化的功能,并比较了它们的预期和实现的性能。使用来自具有已知纹理的拉伸钢丝的广角散射数据来测试各种算法,以建立张量层析成像方法对此类样品的可行性,并比较现有算法的性能。
    Small-angle X-ray tensor tomography and the related wide-angle X-ray tensor tomography are X-ray imaging techniques that tomographically reconstruct the anisotropic scattering density of extended samples. In previous studies, these methods have been used to image samples where the scattering density depends slowly on the direction of scattering, typically modeling the directionality, i.e. the texture, with a spherical harmonics expansion up until order ℓ = 8 or lower. This study investigates the performance of several established algorithms from small-angle X-ray tensor tomography on samples with a faster variation as a function of scattering direction and compares their expected and achieved performance. The various algorithms are tested using wide-angle scattering data from an as-drawn steel wire with known texture to establish the viability of the tensor tomography approach for such samples and to compare the performance of existing algorithms.
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  • 文章类型: Journal Article
    在多发性骨髓瘤(MM)中,单克隆浆细胞可以局灶性和弥漫性方式发生骨髓浸润,使分期和预后相当困难。我们研究的目的是测试18F-2-脱氧-d-葡萄糖正电子发射断层扫描/计算机断层扫描(18F-FDGPET/CT)图像的纹理分析是否可以预测MM患者的生存率。46例患者治疗前行18F-FDG-PET/CT检查。我们使用自动轮廓程序来分割最热的局灶性病变(FL)和腰椎,以评估弥漫性骨髓受累(DI)。最大标准化吸收值(SUVmax),平均标准化摄取值(SUVmean)和纹理特征,如变异系数(CoV),分别从46FL和46DI获得。经过51个月的平均随访,24例患者死于骨髓瘤,并与22名幸存者进行了比较。在单变量分析中,FLSUVmax(p=0.0453),FLSUVmean(p=0.0463),FLCoV(p=0.0211)和DISUVmax(p=0.0538)预测总生存期(OS)。在多变量分析中,模型中仅保留了FLCoV和DISUVmax(p=0.0154)。通过Kaplan-Meier方法和对数秩检验,FLCoV低于截止值的患者的OS明显优于FLCoV高于截止值的患者(p=0.0003),以及DISUVmax低于阈值的患者与DISUVmax高于阈值的患者(p=0.0006)。通过使用它们各自的截止值组合FLCoV和DISUVmax,得到的4条生存曲线之间存在统计学上的显著差异(p=0.0001).的确,FLCoV和DISUVmax均低于各自临界值的患者显示出最佳预后.来自18F-FDGPET/CT分析的常规和纹理参数可以通过评估局灶性和弥漫性浸润的异质性和侵袭性来预测MM患者的生存率。
    In multiple myeloma (MM) bone marrow infiltration by monoclonal plasma cells can occur in both focal and diffuse manner, making staging and prognosis rather difficult. The aim of our study was to test whether texture analysis of 18 F-2-deoxy-d-glucose positron emission tomography/computed tomography (18F-FDG PET/CT) images can predict survival in MM patients. Forty-six patients underwent 18 F-FDG-PET/CT before treatment. We used an automated contouring program for segmenting the hottest focal lesion (FL) and a lumbar vertebra for assessing diffuse bone marrow involvement (DI). Maximum standardized uptake value (SUVmax), mean standardized uptake value (SUVmean) and texture features such as Coefficient of variation (CoV), were obtained from 46 FL and 46 DI. After a mean follow-up of 51 months, 24 patients died of myeloma and were compared to the 22 survivors. At univariate analysis, FL SUVmax (p = 0.0453), FL SUVmean (p = 0.0463), FL CoV (p = 0.0211) and DI SUVmax (p = 0.0538) predicted overall survival (OS). At multivariate analysis only FL CoV and DI SUVmax were retained in the model (p = 0.0154). By Kaplan-Meier method and log-rank testing, patients with FL CoV below the cut-off had significantly better OS than those with FL CoV above the cut-off (p = 0.0003), as well as patients with DI SUVmax below the threshold versus those with DI SUVmax above the threshold (p = 0.0006). Combining FL CoV and DI SUVmax by using their respective cut-off values, a statistically significant difference was found between the resulting four survival curves (p = 0.0001). Indeed, patients with both FL CoV and DI SUVmax below their respective cut-off values showed the best prognosis. Conventional and texture parameters derived from 18F-FDG PET/CT analysis can predict survival in MM patients by assessing the heterogeneity and aggressiveness of both focal and diffuse infiltration.
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  • 文章类型: Journal Article
    我们的目标是在超极化He3磁共振成像(MRI)数据集上训练机器学习算法,以生成患有和不患有慢性阻塞性肺疾病的参与者的加速肺功能下降模型。我们假设超极化气体核磁共振通气,机器学习,和多变量模型可以联合预测1s内用力呼气量(FEV1)在3年内的临床相关变化.
    超极化He3MRI是使用带有部分回波的冠状笛卡尔快速梯度召回回波序列采集的,并使用k均值聚类算法进行分割。使用自定义开发的算法和PyRadiomics平台,使用最大熵掩模生成用于纹理特征提取的感兴趣区域。主成分和Boruta分析用于特征选择。使用接收器下面积-操作曲线和敏感性-特异性分析评估了基于集成和单个机器学习分类器。
    我们评估了88名前吸烟者参与者的31±7个月的随访数据,其中57人(22名女性/35名男性,70±9年)在FEV1和31名参与者(7名女性/24名男性,68±9年),FEV1恶化≥60毫升/年。此外,3/88戒烟者报告吸烟状况发生变化。我们使用人口统计生成了机器学习模型来预测FEV1的下降,肺活量测定,和纹理特征,后者产生81%的最高分类准确率。组合模型(对所有可用的测量结果进行训练)实现了82%的总体最佳分类准确性;但是,这与仅根据MRI纹理特征训练的模型没有显著差异.
    第一次,我们采用超极化He3MRI通气纹理特征和机器学习技术,以82%的准确率识别FEV1加速下降的戒烟者.
    UNASSIGNED: Our objective was to train machine-learning algorithms on hyperpolarized He 3 magnetic resonance imaging (MRI) datasets to generate models of accelerated lung function decline in participants with and without chronic-obstructive-pulmonary-disease. We hypothesized that hyperpolarized gas MRI ventilation, machine-learning, and multivariate modeling could be combined to predict clinically-relevant changes in forced expiratory volume in 1 s ( FEV 1 ) across 3 years.
    UNASSIGNED: Hyperpolarized He 3 MRI was acquired using a coronal Cartesian fast gradient recalled echo sequence with a partial echo and segmented using a k-means clustering algorithm. A maximum entropy mask was used to generate a region-of-interest for texture feature extraction using a custom-developed algorithm and the PyRadiomics platform. The principal component and Boruta analyses were used for feature selection. Ensemble-based and single machine-learning classifiers were evaluated using area-under-the-receiver-operator-curve and sensitivity-specificity analysis.
    UNASSIGNED: We evaluated 88 ex-smoker participants with 31 ± 7 months follow-up data, 57 of whom (22 females/35 males, 70 ± 9 years) had negligible changes in FEV 1 and 31 participants (7 females/24 males, 68 ± 9 years) with worsening FEV 1 ≥ 60    mL / year . In addition, 3/88 ex-smokers reported a change in smoking status. We generated machine-learning models to predict FEV 1 decline using demographics, spirometry, and texture features, with the later yielding the highest classification accuracy of 81%. The combined model (trained on all available measurements) achieved the overall best classification accuracy of 82%; however, it was not significantly different from the model trained on MRI texture features alone.
    UNASSIGNED: For the first time, we have employed hyperpolarized He 3 MRI ventilation texture features and machine-learning to identify ex-smokers with accelerated decline in FEV 1 with 82% accuracy.
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  • 文章类型: Systematic Review
    背景:影像组学可以提供来自医学成像的定量特征,这些特征可以与各种生物学特征和各种临床终点相关。Delta影像组学,另一方面,包括在不同采集时间点的特征变化分析,通常在治疗之前和之后。本研究的目的是对不同的delta放射组学方法进行系统评价。
    方法:在Embase中搜索了符合条件的文章,Pubmed,和ScienceDirect使用包含自由文本和/或医学主题词(MeSH)的搜索字符串以及3个关键搜索词:\'\'纹理,\'和\'delta。使用QUADAS-2和RQS工具分析研究。
    结果:48项研究最终被纳入。这些研究分为临床前/方法学(5项研究,10.4%);直肠癌(6项研究,12.5%);肺癌(12项研究,25%);肉瘤(5项研究,10.4%);前列腺癌(3项研究,6.3%),头颈癌(6项研究,12.5%);不包括直肠的胃肠道恶性肿瘤(7项研究,14.6%)和其他疾病部位(4项研究,8.3%)。所有研究的RQS中位数为25%(平均21%±12%),13项研究(30.2%)质量评分<10%,22项研究(51.2%)<25%。
    结论:Delta放射组学显示了肿瘤学的几个临床终点的潜在益处,比如鉴别诊断,预后和治疗反应的预测,副作用评估。然而,本系统综述中包含的研究存在总体上方法学严谨程度低的偏见,所以目前的结论是不同的,不健壮,难以复制。对于delta放射组学方法的临床验证,需要进行前瞻性和多中心研究的进一步研究。
    BACKGROUND: Radiomics can provide quantitative features from medical imaging that can be correlated with various biological features and diverse clinical endpoints. Delta radiomics, on the other hand, consists in the analysis of feature variation at different acquisition time points, usually before and after therapy. The aim of this study was to provide a systematic review of the different delta radiomics approaches.
    METHODS: Eligible articles were searched in Embase, Pubmed, and ScienceDirect using a search string that included free text and/or Medical Subject Headings (MeSH) with 3 key search terms: \'radiomics,\' \'texture,\' and \'delta.\' Studies were analyzed using QUADAS-2 and the RQS tool.
    RESULTS: Forty-eight studies were finally included. The studies were divided into preclinical/methodological (5 studies, 10.4%); rectal cancer (6 studies, 12.5%); lung cancer (12 studies, 25%); sarcoma (5 studies, 10.4%); prostate cancer (3 studies, 6.3%), head and neck cancer (6 studies, 12.5%); gastrointestinal malignancies excluding rectum (7 studies, 14.6%) and other disease sites (4 studies, 8.3%). The median RQS of all studies was 25% (mean 21% ± 12%), with 13 studies (30.2%) achieving a quality score < 10% and 22 studies (51.2%) < 25%.
    CONCLUSIONS: Delta radiomics shows potential benefit for several clinical endpoints in oncology, such asdifferential diagnosis, prognosis and prediction of treatment response, evaluation of side effects. Nevertheless, the studies included in this systematic review suffer from the bias of overall low methodological rigor, so that the conclusions are currently heterogeneous, not robust and hardly replicable. Further research with prospective and multicenter studies is needed for the clinical validation of delta radiomics approaches.
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  • 文章类型: Journal Article
    纹理分析可以提供新的基于成像的生物标志物。从计算机断层扫描(CT)得出的纹理分析可能能够更好地表征接受CT引导的经皮骨活检的患者。本研究评估了接受CT引导下骨活检的患者的这种和相关的纹理特征与活检结果。总的来说,123名患者(89名女性患者,72.4%)被纳入本研究。所有患者均使用11号同轴针进行CT引导下经皮穿刺活检。研究了临床参数和定量成像特征。随机森林分类器用于预测阳性活检结果。总的来说,69例(56.1%)有溶骨性转移,54例(43.9%)有骨性转移。活检总阳性率为72%。开发的影像组学模型证明了阳性活检结果的预测准确性,AUC为0.75[95CI0.65-0.85]。在乳腺癌患者的亚组中,该模型的AUC为0.85[95CI0.73-0.96]。在非乳腺癌患者亚组中,签名的AUC为0.80[95CI0.60-0.99]。由常规和纹理特征组成的定量CT成像发现可以帮助预测CT引导的骨活检的活检结果。开发的影像组学签名有助于临床决策,并且可以识别有活检阴性风险的患者。
    Texture analysis can provide new imaging-based biomarkers. Texture analysis derived from computed tomography (CT) might be able to better characterize patients undergoing CT-guided percutaneous bone biopsy. The present study evaluated this and correlated texture features with bioptic outcome in patients undergoing CT-guided bone biopsy. Overall, 123 patients (89 female patients, 72.4 %) were included into the present study. All patients underwent CT-guided percutaneous bone biopsy with an 11 Gauge coaxial needle. Clinical parameters and quantitative imaging features were investigated. Random forest classifier was used to predict a positive biopsy result. Overall, 69 patients had osteolytic metastasis (56.1 %) and 54 had osteoblastic metastasis (43.9 %). The overall positive biopsy rate was 72 %. The developed radiomics model demonstrated a prediction accuracy of a positive biopsy result with an AUC of 0.75 [95 %CI 0.65 - 0.85]. In a subgroup of breast cancer patients, the model achieved an AUC of 0.85 [95 %CI 0.73 - 0.96]. In the subgroup of non-breast cancer patients, the signature achieved an AUC of 0.80 [95 %CI 0.60 - 0.99]. Quantitative CT imaging findings comprised of conventional and texture features can aid to predict the bioptic result of CT-guided bone biopsies. The developed radiomics signature aids in clinical decision-making, and could identify patients at risk for a negative biopsy.
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  • 文章类型: Journal Article
    了解透明细胞肾细胞癌(ccRCC)的最新进展强调了BAP1基因在其发病机理和预后中的关键作用。虽然vonHippel-Lindau(VHL)突变已经被广泛研究,新出现的证据表明,BAP1和其他基因的突变显著影响患者的预后.有和没有基于CT成像的纹理分析的放射基因组学在预测BAP1突变状态和总体生存结果方面具有希望。然而,需要进行更大队列和标准化成像方案的前瞻性研究,以验证这些发现并将其有效转化为临床实践,为ccRCC的个性化治疗策略铺平了道路。本文就BAP1突变在ccRCC发病机制及预后中的作用进行综述。以及放射基因组学在预测突变状态和临床结局方面的潜力。
    Recent advancements in understanding clear cell renal cell carcinoma (ccRCC) have underscored the critical role of the BAP1 gene in its pathogenesis and prognosis. While the von Hippel-Lindau (VHL) mutation has been extensively studied, emerging evidence suggests that mutations in BAP1 and other genes significantly impact patient outcomes. Radiogenomics with and without texture analysis based on CT imaging holds promise in predicting BAP1 mutation status and overall survival outcomes. However, prospective studies with larger cohorts and standardized imaging protocols are needed to validate these findings and translate them into clinical practice effectively, paving the way for personalized treatment strategies in ccRCC. This review aims to summarize the current knowledge on the role of BAP1 mutation in ccRCC pathogenesis and prognosis, as well as the potential of radiogenomics in predicting mutation status and clinical outcomes.
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