■这项研究的目的是研究端粒长度与腹主动脉瘤(AAA)之间的因果效应和潜在机制。
■端粒长度和AAA的汇总统计分别来自IEU开放全基因组关联研究和FinnGenR9。进行了双向孟德尔随机化(MR)分析,以揭示AAA与端粒长度之间的因果关系。从基因表达综合数据库检索三个转录组数据集,并从TelNet下载端粒相关基因。AAA相关差异表达基因(DEGs)的重叠基因,模块基因,端粒相关基因用于进一步研究。使用机器学习算法选择AAA的端粒相关诊断生物标志物,并在数据集和鼠AAA模型中进行验证。建立了生物标志物与免疫浸润景观之间的相关性。
■发现端粒长度与AAA[IVW,或95CI=0.558(0.317-0.701),P<0.0001],而AAA对端粒长度没有提示作用[IVW,OR95CI=0.997(0.990-1.004),P=0.4061]。共有40个基因被认为是AAA端粒相关的DEGs。PLCH2,PRKCQ,经过多种算法和验证,选择SMG1作为生物标志物。免疫浸润分析和单细胞mRNA分析显示PLCH2和PRKCQ主要表达于T细胞,而SMG1主要在T细胞上表达,B细胞,和单核细胞。小鼠AAA模型实验进一步验证了生物标志物的表达升高。
■我们发现了端粒长度对AAA的提示作用,并揭示了端粒长度对AAA的潜在生物标志物和免疫机制。这可能为AAA的诊断和治疗提供新的思路。
UNASSIGNED: The purpose of this study is to investigate the causal effect and potential mechanisms between
telomere length and abdominal aortic aneurysm (AAA).
UNASSIGNED: Summary statistics of
telomere length and AAA were derived from IEU open genome-wide association studies and FinnGen R9, respectively. Bi-directional Mendelian randomization (MR) analysis was conducted to reveal the causal relationship between AAA and telomere length. Three transcriptome datasets were retrieved from the Gene Expression Omnibus database and telomere related genes was down-loaded from TelNet. The overlapping genes of AAA related differentially expressed genes (DEGs), module genes, and
telomere related genes were used for further investigation. Telomere related diagnostic biomarkers of AAA were selected with machine learning algorisms and validated in datasets and murine AAA model. The correlation between biomarkers and immune infiltration landscape was established.
UNASSIGNED: Telomere length was found to have a suggestive negative associations with AAA [IVW, OR 95%CI = 0.558 (0.317-0.701), P < 0.0001], while AAA showed no suggestive effect on telomere length [IVW, OR 95%CI = 0.997 (0.990-1.004), P = 0.4061]. A total of 40 genes was considered as
telomere related DEGs of AAA. PLCH2, PRKCQ, and SMG1 were selected as biomarkers after multiple algorithms and validation. Immune infiltration analysis and single cell mRNA analysis revealed that PLCH2 and PRKCQ were mainly expressed on T cells, while SMG1 predominantly expressed on T cells, B cells, and monocytes. Murine AAA model experiments further validated the elevated expression of biomarkers.
UNASSIGNED: We found a suggestive effect of telomere length on AAA and revealed the potential biomarkers and immune mechanism of
telomere length on AAA. This may shed new light for diagnosis and therapeutics on AAA.