NPF

NPF
  • 文章类型: Journal Article
    新粒子形成(NPF)是大气气溶胶粒子的主要来源,包括云凝结核(CCN),按全球数字。先前的研究强调,与城市背景相比,NPF在路边的频率较低,但强度更高。这里,我们仔细检查了中欧城市背景和路边的NPF。我们表明,氧化有机分子(OOMs)的浓度在路边更大,OOMs与硫酸冷凝到新颗粒上足以解释这两个位置的生长。我们确定了迄今为止未报告的与流量相关的OOM源,在路边和背景的总OOM中占29%和16%,分别。严重的,这种迄今为止尚未发现的OOM源是城市NPF的重要组成部分。没有它们对增长率的贡献和随后对粒子存活的增强,在路边,NPF产生的>50nm颗粒的数量将减少21倍。因此,减少来自道路交通的碳氢化合物排放可以减少颗粒数量和CCN计数。
    New particle formation (NPF) is a major source of atmospheric aerosol particles, including cloud condensation nuclei (CCN), by number globally. Previous research has highlighted that NPF is less frequent but more intense at roadsides compared to urban background. Here, we closely examine NPF at both background and roadside sites in urban Central Europe. We show that the concentration of oxygenated organic molecules (OOMs) is greater at the roadside, and the condensation of OOMs along with sulfuric acid onto new particles is sufficient to explain the growth at both sites. We identify a hitherto unreported traffic-related OOM source contributing 29% and 16% to total OOMs at the roadside and background, respectively. Critically, this hitherto undiscovered OOM source is an essential component of urban NPF. Without their contribution to growth rates and the subsequent enhancements to particle survival, the number of >50 nm particles produced by NPF would be reduced by a factor of 21 at the roadside site. Reductions to hydrocarbon emissions from road traffic may thereby reduce particle numbers and CCN counts.
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  • 文章类型: Journal Article
    除了从土壤中吸收氮,豆科植物具有通过共生固氮利用大气N2的能力。因此,豆科植物已经发展了调节结瘤的机制,以响应土壤中硝酸盐的量;在高硝酸盐浓度的存在下,结瘤被抑制,而低硝酸盐浓度刺激结瘤和固氮。这使豆科植物可以从土壤氮的获取转变为共生固氮。最近,对硝酸盐运输者特别感兴趣,如硝酸盐转运蛋白1/肽转运蛋白家族(NPF)和硝酸盐转运蛋白2(NRT2),在结节的功能中起作用。两种模型植物的硝酸盐转运蛋白,莲花和十字花菜,根据硝酸盐浓度显示对结节功能具有积极和/或消极作用,在本文中介绍。特别是,对以下转运蛋白进行了深入研究:(I)NPF转运蛋白家族的成员,例如LjNPF8.6和LjNPF3.1,以及MtNPF1.7和MtNPF7.6,和(ii)NRT2转运蛋白家族的成员,例如LjNRT2.4和LjNRT2.1,以及MtNRT2.1。此外,通过利用文献中可用的基因组和转录组数据,我们已经确定了Pisumsativum中完整的PsNPF家族(先前描述的69个序列和我们注释的21个新序列)和假定的硝酸盐转运蛋白候选蛋白,这些候选蛋白在P.sativum的结节功能中起作用。
    In addition to absorbing nitrogen from the soil, legumes have the ability to use atmospheric N2 through symbiotic nitrogen fixation. Therefore, legumes have developed mechanisms regulating nodulation in response to the amount of nitrate in the soil; in the presence of high nitrate concentrations, nodulation is inhibited, while low nitrate concentrations stimulate nodulation and nitrogen fixation. This allows the legumes to switch from soil nitrogen acquisition to symbiotic nitrogen fixation. Recently, particular interest has been given to the nitrate transporters, such as Nitrate Transporter1/Peptide transporter Family (NPF) and Nitrate Transporter 2 (NRT2), having a role in the functioning of nodules. Nitrate transporters of the two model plants, Lotus japonicus and Medicago truncatula, shown to have a positive and/or a negative role in nodule functioning depending on nitrate concentration, are presented in this article. In particular, the following transporters were thoroughly studied: (i) members of NPF transporters family, such as LjNPF8.6 and LjNPF3.1 in L. japonicus and MtNPF1.7 and MtNPF7.6 in M. truncatula, and (ii) members of NRT2 transporters family, such as LjNRT2.4 and LjNRT2.1 in L. japonicus and MtNRT2.1 in M. truncatula. Also, by exploiting available genomic and transcriptomic data in the literature, we have identified the complete PsNPF family in Pisum sativum (69 sequences previously described and 21 new that we have annotated) and putative nitrate transporters candidate for playing a role in nodule functioning in P. sativum.
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  • 文章类型: Journal Article
    bZIP(碱性亮氨酸拉链)蛋白在各种生物学功能中起着至关重要的作用。氮是植物生长所必需的元素,特别是在黄瓜(Cucumissativus)中,由于其浅根。然而,bZIP基因在黄瓜氮代谢中的调控尚未研究。在这项研究中,我们在黄瓜基因组中鉴定出72个bZIP基因(CsbZIPs),可分为13组。这些基因在7条染色体上分布不均,和同种学分析表明,CsbZIP基因以分段复制的方式扩增。此外,我们的全基因组表达分析表明,CsbZIP基因具有不同的模式,并且五个CsbZIP基因在叶片和根中都受到氮处理的调控。与CsNPF一致,CsbZIP55和CsbZIP65在叶片和根中受到氮处理的调控。此外,亚细胞定位显示CsbZIP55和CsbZIP65在细胞核中具有特异性,转录激活实验表明CsbZIP55和CsbZIP65具有转录激活活性。此外,在CsbZIP55和CsbZIP65过表达植物中,大多数氮调节的CsNPF基因被下调。一起来看,我们对bZIP基因家族的全面分析为理解CsbZIPs的分子和生理功能奠定了基础。
    The bZIP (basic leucine zipper) proteins play crucial roles in various biological functions. Nitrogen (N) is an essential element for plant growth, especially in cucumber (Cucumis sativus) due to its shallow roots. However, the regulation of bZIP genes in cucumber nitrogen metabolism has not been studied yet. In this study, we identified a total of 72 bZIP genes (CsbZIPs) in the cucumber genome that could be classified into 13 groups. These genes were unevenly distributed on seven chromosomes, and synteny analysis showed that the CsbZIP genes were expanded in a segmentally duplicating manner. Furthermore, our genome-wide expression analysis suggested that CsbZIP genes had different patterns and that five CsbZIP genes were regulated by nitrogen treatment in both leaves and roots. Consistent with CsNPF, CsbZIP55 and CsbZIP65 were regulated by nitrogen treatment in leaves and roots. Moreover, the subcellular localization showed that CsbZIP55 and CsbZIP65 were specifically located in the nucleus, and the transcriptional activation assay showed that CsbZIP55 and CsbZIP65 have transcriptional activation activity. Additionally, in the CsbZIP55 and CsbZIP65 overexpression plants, most nitrogen-regulated CsNPF genes were downregulated. Taken together, our comprehensive analysis of the bZIP gene family lays a foundation for understanding the molecular and physiological functions of CsbZIPs.
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  • 文章类型: Journal Article
    硝酸盐转运蛋白1/肽转运蛋白(NPF)家族的蛋白质转运各种底物,如硝酸盐,肽,激素和氯化物.在这项研究中,在栽培的“K326”中对烟草(烟草)NPF家族进行了系统分析。总的来说,鉴定了143个NtNPF基因,并将其系统发育分为8个亚家族,NPF1到NPF8,依据NPF科别的植物种类的分类。分析了NtNPF基因的染色体位置和结构。分析了NaCl胁迫下NtNPF基因的表达谱,以筛选可能涉及烟草中氯化物调节的NPF基因。大多数NtNPF6基因在根和叶中响应盐胁迫。盐胁迫12h后NtNPF6.13的表达显著下调。ntnpf6.13突变体根中的氯化物含量降低。这些发现支持NtNPF6.13参与氯化物吸收。其他几个在烟草氯化物代谢中起潜在作用的NtNPF基因需要进一步研究。
    Proteins of the Nitrate Transporter 1/Peptide Transporter (NPF) family transport a diverse variety of substrates, such as nitrate, peptides, hormones and chloride. In this study, a systematic analysis of the tobacco (Nicotiana tabacum) NPF family was performed in the cultivated \'K326\'. In total, 143 NtNPF genes were identified and phylogenetically classified into eight subfamilies, NPF1 to NPF8, based on the classification of NPF families in other plant species. The chromosomal locations and structures of the NtNPF genes were analyzed. The expression profiles of NtNPF genes under NaCl stress were analyzed to screen the possible NPF genes involving in chloride regulation in tobacco. Most NtNPF6 genes responded to salt stress in the roots and leaves. The expression of NtNPF6.13 was significantly down-regulated after salt stress for 12h. The chloride content was reduced in the roots of ntnpf6.13 mutant. These findings support the participation of NtNPF6.13 in chloride uptake. Several other NtNPF genes that play potential roles in chloride metabolism of tobacco require further study.
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  • 文章类型: Journal Article
    结论:基于植物的生理状态,甘蔗根中硝酸盐的吸收在转录和转录后水平上受到调节,并且可能是区分硝酸盐的决定机制。甘蔗(甘蔗属。)是最适合用作生物燃料原料的能源作物之一,但是甘蔗根对氮(N)肥料的回收率降低会增加作物的碳足迹。甘蔗的低氮利用效率(NUE)与显著低的硝酸盐吸收有关,这限制了农业土壤中可用的大量硝酸盐的利用。为了解甘蔗根系硝酸盐吸收规律,我们确定了主要的典型硝酸盐转运蛋白基因(NRT-NitrateTransporters),然后在对比的N条件下确定了它们在根中的表达谱。基因表达与15N硝酸盐吸收的相关性表明,在氮剥夺或无机氮(铵或硝酸盐)供应下,ScNRT2.1和ScNRT3.1表达的调节是调节硝酸盐高亲和力转运系统活性的主要机制。相反,在缺氮的根中,ScNRT2.1和ScNRT3.1转录的诱导与响应硝酸盐再供应或高氮供应的硝酸盐摄取的显著抑制无关,这表明了转录后调控机制的存在。我们的发现表明,基于生理N状态,高亲和力硝酸盐的吸收在转录水平和转录后水平受到调节,并且NRT2.1和NRT3.1活性的调节可能是区分观察到的硝酸盐吸收的决定机制在甘蔗根中,这有助于该作物种类的低NUE。
    CONCLUSIONS: Nitrate uptake in sugarcane roots is regulated at the transcriptional and posttranscriptional levels based on the physiological status of the plant and is likely a determinant mechanism for discrimination against nitrate. Sugarcane (Saccharum spp.) is one of the most suitable energy crops for biofuel feedstock, but the reduced recovery of nitrogen (N) fertilizer by sugarcane roots increases the crop carbon footprint. The low nitrogen use efficiency (NUE) of sugarcane has been associated with the significantly low nitrate uptake, which limits the utilization of the large amount of nitrate available in agricultural soils. To understand the regulation of nitrate uptake in sugarcane roots, we identified the major canonical nitrate transporter genes (NRTs-NITRATE TRANSPORTERS) and then determined their expression profiles in roots under contrasting N conditions. Correlation of gene expression with 15N-nitrate uptake revealed that under N deprivation or inorganic N (ammonium or nitrate) supply in N-sufficient roots, the regulation of ScNRT2.1 and ScNRT3.1 expression is the predominant mechanism for the modulation of the activity of the nitrate high-affinity transport system. Conversely, in N-deficient roots, the induction of ScNRT2.1 and ScNRT3.1 transcription is not correlated with the marked repression of nitrate uptake in response to nitrate resupply or high N provision, which suggested the existence of a posttranscriptional regulatory mechanism. Our findings suggested that high-affinity nitrate uptake is regulated at the transcriptional and presumably at the posttranscriptional levels based on the physiological N status and that the regulation of NRT2.1 and NRT3.1 activity is likely a determinant mechanism for the discrimination against nitrate uptake observed in sugarcane roots, which contributes to the low NUE in this crop species.
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  • 文章类型: Journal Article
    葡萄(葡萄,Vvi)在其根部通常对成盐离子敏感,特别是在盐水环境中生长时的氯化物(Cl-)。将V.vinifera接穗嫁接到Cl-排除杂种砧木可以减少盐度的影响。葡萄物种中Cl-排除的潜在分子成分在很大程度上仍然未知,然而,各种阴离子通道和转运蛋白代表了控制这种性状的良好候选者。这里,分离了两个硝酸盐/肽转运蛋白家族(NPF)成员VviNPF2.1和VviNPF2.2。两种高度同源的蛋白质都位于拟南芥(拟南芥)原生质体的质膜上。两者都主要在葡萄根和叶中表达,并且与Cl-包含剂相比,在Cl-排除砧木中的含量更高。葡萄树根的定量PCR显示,饥饿后高[NO3-]补给下调了VviNPF2.1和2.2的表达,但不受25mMCl-的影响。VviNPF2.2使用拟南芥增强子陷阱系作为异源宿主进行功能表征,该宿主能够实现细胞类型特异性表达。75mMNaCl处理后,VviNPF2.2仅在根表皮和皮层中的本构表达减少了芽[Cl-]。当不加盐胁迫时,较高的VviNPF2.2表达水平与拟南芥木质部汁液[NO3-]减少相关。我们建议当在根表皮和皮层中表达时,VviNPF2.2可以在根细胞的被动阴离子外排中起作用,这减少了可用于根到茎易位的symasiumCl-。VviNPF2.2,通过其在根表皮和皮质中的作用,可以,因此,通过减少净芽Cl-积累对盐胁迫下的植物有益。
    Grapevines (Vitis vinifera L., Vvi) on their roots are generally sensitive to salt-forming ions, particularly chloride (Cl-) when grown in saline environments. Grafting V. vinifera scions to Cl--excluding hybrid rootstocks reduces the impact of salinity. Molecular components underlying Cl--exclusion in Vitis species remain largely unknown, however, various anion channels and transporters represent good candidates for controlling this trait. Here, two nitrate/peptide transporter family (NPF) members VviNPF2.1 and VviNPF2.2 were isolated. Both highly homologous proteins localized to the plasma membrane of Arabidopsis (Arabidopsis thaliana) protoplasts. Both were expressed primarily in grapevine roots and leaves and were more abundant in a Cl--excluding rootstock compared to a Cl--includer. Quantitative PCR of grapevine roots revealed that VviNPF2.1 and 2.2 expression was downregulated by high [NO3 -] resupply post-starvation, but not affected by 25 mM Cl-. VviNPF2.2 was functionally characterized using an Arabidopsis enhancer trap line as a heterologous host which enabled cell-type-specific expression. Constitutive expression of VviNPF2.2 exclusively in the root epidermis and cortex reduced shoot [Cl-] after a 75 mM NaCl treatment. Higher expression levels of VviNPF2.2 correlated with reduced Arabidopsis xylem sap [NO3 -] when not salt stressed. We propose that when expressed in the root epidermis and cortex, VviNPF2.2 could function in passive anion efflux from root cells, which reduces the symplasmic Cl- available for root-to-shoot translocation. VviNPF2.2, through its role in the root epidermis and cortex, could, therefore, be beneficial to plants under salt stress by reducing net shoot Cl- accumulation.
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  • 文章类型: Journal Article
    次生代谢产物(SMs)在植物的重要功能中起着至关重要的作用,例如生长,发展,防御,并通过在所需地点的运输和积累来生存。然而,与初级代谢物不同,SMs的运输机制尚未得到很好的探索。SM转运蛋白的大量存在之间存在巨大的差距,他们的身份,和功能表征。更好地了解植物SM转运蛋白必将是实现对草药配方中生物活性化合物的急剧增长的需求的一步。因此,通过调节转运体的表达进行转运体工程正在成为以最低成本实现系统代谢工程以提高代谢物生产的长期目标的最可行选择。在这篇评论文章中,我们正在更新对植物SM运输领域最新进展的理解,特别是在过去二十年中发现的。在这里,我们提供了有关ABC中各种类型的完全或部分特征转运蛋白的显着见解,MATE,PUP,和NPF家族,包括它们的不同功能,结构信息,它们的识别和表征的潜在方法,几个监管参数,和他们的调制。通过强调其潜在的应用,特别是在植物胁迫(生物和非生物)耐受性方面,还揭示了“转运工程”概念的新观点。SM积累,去除抗营养化合物,这将对作物改良计划具有重要价值。本研究创建了一个易于识别和更好地理解各种运输者的路线图,在未来的研究中,可以作为运输工程的合适目标。
    Secondary metabolites (SMs) play crucial roles in the vital functioning of plants such as growth, development, defense, and survival via their transportation and accumulation at the required site. However, unlike primary metabolites, the transport mechanisms of SMs are not yet well explored. There exists a huge gap between the abundant presence of SM transporters, their identification, and functional characterization. A better understanding of plant SM transporters will surely be a step forward to fulfill the steeply increasing demand for bioactive compounds for the formulation of herbal medicines. Thus, the engineering of transporters by modulating their expression is emerging as the most viable option to achieve the long-term goal of systemic metabolic engineering for enhanced metabolite production at minimum cost. In this review article, we are updating the understanding of recent advancements in the field of plant SM transporters, particularly those discovered in the past two decades. Herein, we provide notable insights about various types of fully or partially characterized transporters from the ABC, MATE, PUP, and NPF families including their diverse functionalities, structural information, potential approaches for their identification and characterization, several regulatory parameters, and their modulation. A novel perspective to the concept of \"Transporter Engineering\" has also been unveiled by highlighting its potential applications particularly in plant stress (biotic and abiotic) tolerance, SM accumulation, and removal of anti-nutritional compounds, which will be of great value for the crop improvement program. The present study creates a roadmap for easy identification and a better understanding of various transporters, which can be utilized as suitable targets for transporter engineering in future research.
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  • 文章类型: Journal Article
    通过调节转运蛋白,硝酸盐优先于氯化物是植物离子稳态的基本特征。我们表明,拟南芥AtNPF6.3/NRT1.1的直系同源苜蓿MtNPF6.5可以介导非洲爪的卵母细胞中硝酸盐和氯化物的摄取,但具有氯化物选择性,并且其紧密同源物,MtNPF6.7可以运输硝酸盐和氯化物,但具有硝酸盐选择性。MtNPF6.5突变体显示出相对于野生型大大降低的氯化物含量,MtNPF6.5的表达被高氯化物抑制,表明MtNPF6.5在根氯化物吸收中的主要作用。MtNPF6.5和MtNPF6.7被硝酸盐抑制和诱导,分别,这些反应需要转录因子MtNLP1。此外,MtNLP1的损失阻止了从氯化物到硝酸盐的快速转换,作为硝酸盐供应后硝酸盐饥饿的植物中的主要阴离子,深入了解硝酸盐偏好的潜在机制。序列分析揭示了AtNPF6.3直向同源物的三种亚型,基于其预测的底物结合残基:A(氯化物选择性),B(硝酸盐选择性),和C(豆类特定)。在早期分化的植物谱系中不存在B型AtNPF6.3同源物,这表明它们是从氯化物选择性的MtNPF6.5样蛋白进化而来的。
    The preference for nitrate over chloride through regulation of transporters is a fundamental feature of plant ion homeostasis. We show that Medicago truncatula MtNPF6.5, an ortholog of Arabidopsis thaliana AtNPF6.3/NRT1.1, can mediate nitrate and chloride uptake in Xenopus oocytes but is chloride selective and that its close homologue, MtNPF6.7, can transport nitrate and chloride but is nitrate selective. The MtNPF6.5 mutant showed greatly reduced chloride content relative to wild type, and MtNPF6.5 expression was repressed by high chloride, indicating a primary role for MtNPF6.5 in root chloride uptake. MtNPF6.5 and MtNPF6.7 were repressed and induced by nitrate, respectively, and these responses required the transcription factor MtNLP1. Moreover, loss of MtNLP1 prevented the rapid switch from chloride to nitrate as the main anion in nitrate-starved plants after nitrate provision, providing insight into the underlying mechanism for nitrate preference. Sequence analysis revealed three sub-types of AtNPF6.3 orthologs based on their predicted substrate-binding residues: A (chloride selective), B (nitrate selective), and C (legume specific). The absence of B-type AtNPF6.3 homologues in early diverged plant lineages suggests that they evolved from a chloride-selective MtNPF6.5-like protein.
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  • 文章类型: Journal Article
    The insect taste system regulates insect feeding behavior and patterns of food consumption. In this study, we showed that the medial and lateral sensilla styloconica in the mouthparts of 5th-instar Asian corn borer larvae are sensitive to fructose and sucrose in a concentration-dependent way. The two sensilla produced significant electrophysiological responses (greater than100 spikes/s) by exposure to 10 mM fructose or sucrose. However, electrophysiological responses and feeding preferences to fructose or sucrose were inhibited by neuropeptide F double-stranded RNA (dsNPF). Additionally, the medial sensilla styloconica are sensitive to low concentrations of the deterrents caffeine and nicotine. However, starvation, followed by increases in larval npf expression plus feeding, led to increases in spike frequencies of related sensilla to fructose, sucrose, and deterrents. In contrast, these responses were reduced on the dsNPF treatment. Our results suggest that NPF plays an important role influencing caterpillar feeding behavior through regulating the taste neurons of the sensilla styloconica.
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  • 文章类型: Journal Article
    口渴是一种动机状态,可驱动行为以获取水分以实现体内稳态。我们确定了两种类型的中央大脑中间神经元,它们调节果蝇的口渴寻求水,我们称之为Janu神经元。Janu-GABA,食管下区的一个局部中间神经元,是由缺水激活的,是特定于口渴的寻求。Janu-AstA从食道下区投射到前大脑内侧,更高阶的处理区域。Janu-AstA与神经肽AllatostatinA发出信号,以促进寻求水和抑制摄食行为。NPF(果蝇NPY)神经元是Janu-AstA的突触后,用于通过AstA-R2甘丙肽样受体寻求水和进食。NPF神经元使用NPF来调节口渴和饥饿行为。苍蝇选择Janu神经元激活,这表明口渴地寻求湿度梯度是有益的。这些发现确定了新颖的中枢神经回路元素,这些元素协调内部状态驱动以选择性地控制有动机的寻求行为。
    Thirst is a motivational state that drives behaviors to obtain water for fluid homeostasis. We identified two types of central brain interneurons that regulate thirsty water seeking in Drosophila, that we term the Janu neurons. Janu-GABA, a local interneuron in the subesophageal zone, is activated by water deprivation and is specific to thirsty seeking. Janu-AstA projects from the subesophageal zone to the superior medial protocerebrum, a higher order processing area. Janu-AstA signals with the neuropeptide Allatostatin A to promote water seeking and to inhibit feeding behavior. NPF (Drosophila NPY) neurons are postsynaptic to Janu-AstA for water seeking and feeding through the AstA-R2 galanin-like receptor. NPF neurons use NPF to regulate thirst and hunger behaviors. Flies choose Janu neuron activation, suggesting that thirsty seeking up a humidity gradient is rewarding. These findings identify novel central brain circuit elements that coordinate internal state drives to selectively control motivated seeking behavior.
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