Mendelian randomization analysis

孟德尔随机化分析
  • 文章类型: Journal Article
    肥胖与败血症之间的关系越来越受到关注。本研究旨在探讨生命过程肥胖与脓毒症发病率之间的因果关系。
    本研究采用孟德尔随机化(MR)方法。仪器变体是从全基因组关联研究中获得的,用于生命周期肥胖,包括出生体重,儿童体重指数(BMI),儿童肥胖,成人BMI,腰围,内脏肥胖,和身体脂肪百分比。本研究使用了包括10,154例和454,764例对照在内的脓毒症全基因组关联研究的荟萃分析。MR分析使用逆方差加权,MREgger回归,加权中位数,加权模式,和简单的模式。仪器变量在全基因组显著性水平上被鉴定为显著的单核苷酸多态性(P<5×10-8)。进行敏感性分析以评估MR估计的可靠性。
    使用逆方差加权方法的MR分析显示,儿童BMI增加的遗传易感性(OR=1.29,P=0.003),儿童肥胖(OR=1.07,P=0.034),成人BMI(OR=1.38,P<0.001),成人腰围(OR=1.01,P=0.028),成人内脏肥胖(OR=1.53,P<0.001)预测脓毒症的风险较高。敏感性分析未发现MR结果有任何偏倚。
    结果表明,儿童和成人的肥胖对败血症的发病率有因果关系。然而,仍需要更多精心设计的研究来验证它们之间的关联.
    UNASSIGNED: The relationship between adiposity and sepsis has received increasing attention. This study aims to explore the causal relationship between life course adiposity and the sepsis incidence.
    UNASSIGNED: Mendelian randomization (MR) method was employed in this study. Instrumental variants were obtained from genome-wide association studies for life course adiposity, including birth weight, childhood body mass index (BMI), childhood obesity, adult BMI, waist circumference, visceral adiposity, and body fat percentage. A meta-analysis of genome-wide association studies for sepsis including 10,154 cases and 454,764 controls was used in this study. MR analyses were performed using inverse variance weighted, MR Egger regression, weighted median, weighted mode, and simple mode. Instrumental variables were identified as significant single nucleotide polymorphisms at the genome-wide significance level (P < 5×10-8). The sensitivity analysis was conducted to assess the reliability of the MR estimates.
    UNASSIGNED: Analysis using the MR analysis of inverse variance weighted method revealed that genetic predisposition to increased childhood BMI (OR = 1.29, P = 0.003), childhood obesity (OR = 1.07, P = 0.034), adult BMI (OR = 1.38, P < 0.001), adult waist circumference (OR = 1.01, P = 0.028), and adult visceral adiposity (OR = 1.53, P < 0.001) predicted a higher risk of sepsis. Sensitivity analysis did not identify any bias in the MR results.
    UNASSIGNED: The results demonstrated that adiposity in childhood and adults had causal effects on sepsis incidence. However, more well-designed studies are still needed to validate their association.
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  • 文章类型: Journal Article
    先前学者提出的肠-视网膜轴的概念主要集中在肠道菌群与视网膜疾病之间的关系上,很少有人进一步扩大肠道疾病与视网膜疾病的关系。为了进一步证实肠-视网膜轴的概念,我们使用孟德尔随机化(MR)分析了炎症性肠病(IBD)和糖尿病性视网膜病变(DR),并利用中介分析进一步探讨影响这种因果关系的潜在物质。
    在孟德尔随机化(MR)调查中,利用了全基因组关联研究(GWAS)的遗传变异汇总统计。IBD的GWAS数据(包括溃疡性结肠炎(UC),克罗恩病(CD),和IBD)非芬兰欧洲人(NFE)来自已发表的文章。相比之下,DR(包括DR和糖尿病性黄斑病变(DMP))的数据来自FinnGenR9.因果关系已经使用逆方差加权(IVW)进行了研究,MR-Egger,加权中位数和敏感性分析验证了结果的稳定性。此外,我们应用中介分析来研究循环炎症蛋白和血浆脂质是否起中介作用,并计算了其效果比。
    通过使用逆方差加权(IVW)方法和加权中位数方法发现了IBD与DR之间的因果关系。在前MR中,UC与DR风险降低显著相关(IVW:OR=0.874;95CI=0.835-0.916;P值=1.28E-08)(加权中位数:OR=0.893;95CI=0.837-0.954;P值=7.40E-04)。在反向MR中,结果表明,DR(IVW:OR=0.870;95CI=0.828-0.914;P值=2.79E-08)(加权中位数:OR=0.857;95CI=0.801-0.916;P值=6.40E-06)和DMP(IVW:OR=0.900;95CI=0.865-37;P值=3.34E-07)(加权CI=0.9E-0.841)降低风险。更重要的是,根据基因预测,DR与IBD风险较低相关(IVW:OR=0.922;95CI=0.873-0.972;P值=0.002)(加权中位数:OR=0.924;95CI=0.861-0.992;P值=0.029)。成纤维细胞生长因子21(FGF21),磷脂酰胆碱(PC),三酰甘油(TG)在这些关系中充当介质。
    我们的研究为研究IBD和DR之间的遗传关系中的肠-视网膜轴提供了新的见解和来源。我们发现了四种介质,以及更多有关肠道和视网膜疾病之间的关联,并为肠-视网膜轴理论提供了更多证据。
    UNASSIGNED: The concept of the gut-retinal axis proposed by previous scholars primarily focused on the relationship between intestinal microbiota and retinal diseases, and few further expanded the relationship between intestinal diseases and retinal diseases. To further substantiate the concept of the gut-retinal axis, we analyzed inflammatory bowel disease (IBD) and diabetic retinopathy (DR) using Mendelian randomization (MR), and use mediation analysis to further explore the potential substances that influence this causal relationship.
    UNASSIGNED: The genome-wide association study\'s (GWAS) summary statistics for genetic variations were utilized in a Mendelian randomization (MR) investigation. GWAS data on IBD (including ulcerative colitis (UC), Crohn\'s disease (CD), and IBD) for non-Finnish Europeans (NFE) were sourced from published articles. In contrast, data on DR (including DR and diabetic maculopathy (DMP)) were obtained from FinnGen R9. The causal relationship has been investigated using inverse variance weighted (IVW), MR-Egger, and weighted median and sensitivity analysis was applied to verify the stability of the results. In addition, we applied mediation analysis to investigate whether circulating inflammatory proteins and plasma lipids played a mediating role, and calculated its effect ratio.
    UNASSIGNED: The causal relationship between IBD and DR was discovered by employing the inverse variance weighted (IVW) method and weighted median method. In forward MR, UC was significantly associated with lower risk of DR (IVW: OR=0.874; 95%CI= 0.835-0.916; P value= 1.28E-08) (Weighted median: OR=0.893; 95%CI= 0.837-0.954; P value= 7.40E-04). In reverse MR, it was shown that DR (IVW: OR=0.870; 95%CI= 0.828-0.914; P value= 2.79E-08)(Weighted median: OR=0.857; 95%CI= 0.801-0.916; P value= 6.40E-06) and DMP (IVW: OR=0.900; 95%CI= 0.865-0.937; P value= 3.34E-07)(Weighted median: OR=0.882; 95%CI= 0.841-0.924; P value= 1.82E-07) could reduce the risk of CD. What\'s more, DR is associated with a lower risk of IBD according to genetic prediction (IVW: OR=0.922; 95%CI= 0.873-0.972; P value= 0.002) (Weighted median: OR=0.924; 95%CI= 0.861-0.992; P value= 0.029). Fibroblast growth factor 21 (FGF21), phosphatidylcholine (PC), and triacylglycerol (TG) serve as mediators in these relationships.
    UNASSIGNED: Our research offers novel insights and sources for investigating the gut-retina axis in the genetic relationship between IBD and DR. We discover four mediators and more about the association between the intestine and retinal disorders and provide more evidence for the gut-retinal axis theory.
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  • 文章类型: English Abstract
    一些流行病学研究表明,与怀孕期间血压正常的妇女相比,发生先兆子痫(PE)的孕妇的母体血浆中睾丸激素水平升高,揭示了女性高雄激素血症与PE之间的潜在关联。探讨高雄激素血症与PE的因果关系,这项研究选择了总睾酮(TT),生物可利用的睾酮(BIOT),和性激素结合球蛋白(SHBG)作为暴露因子,PE和慢性高血压叠加PE作为疾病结局。双样本孟德尔随机化(MR)分析用于遗传剖析三个暴露因素之间的因果关系(TT,BIOT,和SHBG)以及PE和慢性高血压合并PE的结局。
    两个独立的全基因组关联研究(GWAS)数据库用于双样本MR分析。在来自英国生物库队列的女性参与者的GWAS数据中,与TT相关的单核苷酸多态性(SNP),BIOT,和SHBG进行了分析,涉及230454、188507和188908样本,分别。来自芬兰数据库的PE和慢性高血压与叠加PE的GWAS数据用于计算SNP,涉及3556例PE病例和114735例对照,以及38例合并PE的慢性高血压和114735例对照。为了满足MR分析中工具相关性和独立性的假设,与暴露相关的SNP在全基因组水平(P<5.0×10-8),基于R2<0.001的聚类阈值和大于10000kb的等位基因距离,排除了连锁不平衡干扰。已知的混杂因素,包括以前的PE,慢性肾病,慢性高血压,糖尿病,系统性红斑狼疮,或抗磷脂综合征,还进行了鉴定,并删除了相关的SNP。最后,我们根据结果GWAS中与暴露相关的SNP提取结果数据,整合暴露和结果数据,去除回文序列。五种遗传因果分析方法,包括逆方差加权法(IVW),MR-Egger回归,加权中位数法,简单的模式方法,和加权模式方法,被用来推断因果关系。在IVW中,假设选择的SNP满足3个假设,并提供了最理想的效应估计.因此,IVW被用作本研究的主要分析方法。考虑到工具变量之间的潜在异质性,随机效应IVW用于MR分析。使用比值比(OR)和相应的95%置信区间(CI)解释结果,以解释暴露因素对PE和合并PE的慢性高血压的影响。如果CI不包括1且P值小于0.05,则认为差异具有统计学意义。进行敏感性分析以评估异质性和多效性。使用Cochran的Q检验检查异质性,使用MR-Egger截距分析评估多效性。此外,我们进行了留一法分析,以检查个体SNP是否驱动了因果关系.为了进一步验证调查结果,使用相同的方法和结果变量进行MR分析,但是不同的暴露因素,包括根据BMI(WHRadjBMI)和25-羟维生素D水平调整的腰臀比,WHRadjBMI和PE的MR结果作为阳性对照,25-羟维生素D水平和PE的MR结果作为阴性对照。
    根据选择遗传工具变量的标准,186、127和262个SNP被鉴定为与睾酮指标TT显著相关的遗传工具变量,BIOT,SHBGMR分析未发现TT之间存在因果关系,BIOT,和SHBG水平以及合并PE的发展为PE和慢性高血压的风险。IVW方法预测遗传预测的TT(OR[95%CI]=1.018[0.897-1.156],P=0.78),生物(OR[95%CI]=1.11[0.874-1.408],P=0.392),和SHBG(OR[95%CI]=0.855[0.659-1.109],P=0.239)与PE无关。同样,遗传预测的TT(OR[95%CI]=1.222[0.548-2.722],P=0.624),生物(OR[95%CI]=1.066[0.242-4.695],P=0.933),和SHBG(OR[95%CI]=0.529[0.119-2.343],P=0.402)与合并PE的慢性高血压没有显着相关。此外,使用MR-Egger方法进行MR分析,加权中位数法,简单的模式方法,和加权模式方法产生了一致的结果,表明睾酮水平升高与PE或合并PE的慢性高血压之间没有显著的因果关系。在PE分析中观察到SHBG的异质性(CochranQ检验,P=0.01),并在PE分析中检测到BIOT的多效性(MR-Egger截距分析,P=0.014),这表明工具变量不会通过BIOT影响PE。其他工具变量没有显示出显著的异质性或多效性。留一法分析证实,MR分析的结果不是由单个工具变量驱动的。与以前的MR研究一致,使用WHRadjBMI和25-羟维生素D水平的对照MR分析结果支持了MR分析方法和本研究所用方法的准确性.
    MR分析结果表明,当前的遗传证据不支持TT之间的因果关系,BIOT,和SHBG水平与PE和慢性高血压的发展叠加PE。这项研究表明,睾酮升高可能是PE的危险因素,但不是直接原因。
    UNASSIGNED: Some epidemiological studies have shown that pregnant women who develop preeclampsia (PE) have elevated levels of testosterone in their maternal plasma compared to women with normal blood pressure during pregnancy, revealing a potential association between hyperandrogenism in women and PE. To explore the causal relationship between hyperandrogenism and PE, this study selected total testosterone (TT), bioavailable testosterone (BIOT), and sex hormone binding globulin (SHBG) as exposure factors and PE and chronic hypertension with superimposed PE as disease outcomes. Two-sample Mendelian randomization (MR) analyses were used to genetically dissect the causal relationships between the three exposure factors (TT, BIOT, and SHBG) and the outcomes of PE and chronic hypertension with superimposed PE.
    UNASSIGNED: Two independent genome-wide association study (GWAS) databases were used for the two-sample MR analysis. In the GWAS data of female participants from the UK Biobank cohort, single nucleotide polymorphisms (SNPs) associated with TT, BIOT, and SHBG were analyzed, involving 230454, 188507, and 188908 samples, respectively. GWAS data on PE and chronic hypertension with superimposed PE from the Finnish database were used to calculate SNP, involving 3556 PE cases and 114735 controls, as well as 38 cases of chronic hypertension with superimposed PE and 114735 controls. To meet the assumptions of instrumental relevance and independence in MR analysis, SNPs associated with exposure were identified at the genome-wide level (P<5.0×10-8), and those in linkage disequilibrium interference were excluded based on clustering thresholds of R 2<0.001 and an allele distance greater than 10000 kb. Known confounding factors, including previous PE, chronic kidney disease, chronic hypertension, diabetes, systemic lupus erythematosus, or antiphospholipid syndrome, were also identified and the relevant SNPs were removed. Finally, we extracted the outcome data based on the exposure-related SNPs in the outcome GWAS, integrating exposure and outcome data, and removing palindromic sequences. Five genetic causal analysis methods, including inverse variance-weighted method (IVW), MR-Egger regression, weighted median method, simple mode method, and weighted mode method, were used to infer causal relationships. In the IVW, it was assumed that the selected SNPs satisfied the three assumptions and provided the most ideal estimate of the effect. IVW was consequently used as the primary analysis method in this study. Considering the potential heterogeneity among the instrumental variables, random-effects IVW was used for MR analysis. The results were interpreted using odds ratios (OR) and the corresponding 95% confidence interval (CI) to explain the impact of exposure factors on PE and chronic hypertension with superimposed PE. If the CI did not include 1 and had a P value less than 0.05, the difference was considered statistically significant. Sensitivity analysis was conducted to assess heterogeneity and pleiotropy. Heterogeneity was examined using Cochran\'s Q test, and pleiotropy was assessed using MR-Egger intercept analysis. Additionally, leave-one-out analysis was conducted to examine whether individual SNPs were driving the causal associations. To further validate the findings, MR analyses were performed using the same methods and outcome variables, but with different exposure factors, including waist-to-hip ratio adjusted for BMI (WHRadjBMI) and 25-hydroxyvitamin D levels, with MR results for WHRadjBMI and PE serving as the positive controls and MR results for 25-hydroxyvitamin D levels and PE as the negative controls.
    UNASSIGNED: According to the criteria for selecting genetic instrumental variables, 186, 127, and 262 SNPs were identified as genetic instrumental variables significantly associated with testosterone indicators TT, BIOT, and SHBG. MR analysis did not find a causal relationship between the TT, BIOT, and SHBG levels and the risk of developing PE and chronic hypertension with superimposed PE. The IVW method predicted that genetically predicted TT (OR [95% CI]=1.018 [0.897-1.156], P=0.78), BIOT (OR [95% CI]=1.11 [0.874-1.408], P=0.392), and SHBG (OR [95% CI]=0.855 [0.659-1.109], P=0.239) were not associated with PE. Similarly, genetically predicted TT (OR [95% CI]=1.222 [0.548-2.722], P=0.624), BIOT (OR [95% CI]=1.066 [0.242-4.695], P=0.933), and SHBG (OR [95% CI]=0.529 [0.119-2.343], P=0.402) were not significantly associated with chronic hypertension with superimposed PE. Additionally, MR analysis using the MR-Egger method, weighted median method, simple mode method, and weighted mode method yielded consistent results, indicating no significant causal relationship between elevated testosterone levels and PE or chronic hypertension with superimposed PE. Heterogeneity was observed for SHBG in the analysis with PE (Cochran\'s Q test, P=0.01), and pleiotropy was detected for BIOT in the analysis with PE (MR-Egger intercept analysis, P=0.014), suggesting that the instrumental variables did not affect PE through BIOT. Other instrumental variables did not show significant heterogeneity or pleiotropy. Leave-one-out analysis confirmed that the results of the MR analysis were not driven by individual instrumental variables. Consistent with previous MR studies, the results of the control MR analyses using WHRadjBMI and 25-hydroxyvitamin D levels supported the accuracy of the MR analysis approach and the methods used in this study.
    UNASSIGNED: The MR analysis results suggest that current genetic evidence does not support a causal relationship between TT, BIOT, and SHBG levels and the development of PE and chronic hypertension with superimposed PE. This study suggests that elevated testosterone may be a risk factor for PE but not a direct cause.
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  • 文章类型: Journal Article
    近年来,作为全球健康问题,肥胖症的患病率持续上升。大量流行病学研究证实了暴露于环境空气污染物颗粒物2.5(PM2.5)对肥胖的长期影响,但是他们的关系仍然模棱两可。
    利用大规模公开的全基因组关联研究(GWAS),我们进行了单因素和多因素孟德尔随机化(MR)分析,以评估PM2.5暴露对肥胖及其相关指标的因果效应.单变量MR(UVMR)和多变量MR(MVMR)的主要结果是利用逆方差加权(IVW)方法进行估计。加权中位数,MR-Egger,最大似然技术用于UVMR,而MVMR-Lasso方法在补充分析中应用于MVMR。此外,我们进行了一系列全面的敏感性研究,以确定我们的MR检查结果的准确性.
    UVMR分析表明,PM2.5暴露与肥胖风险增加之间存在显着关联,如IVW模型所示(比值比[OR]:6.427;95%置信区间[CI]:1.881-21.968;PFDR=0.005)。此外,PM2.5浓度与脂肪分布指标呈正相关,包括内脏脂肪组织(VAT)(OR:1.861;95%CI:1.244-2.776;PFDR=0.004),尤其是胰腺脂肪(OR:3.499;95%CI:2.092-5.855;PFDR=1.28E-05),和腹部皮下脂肪组织(ASAT)体积(OR:1.773;95%CI:1.106-2.841;PFDR=0.019)。此外,PM2.5暴露与糖脂代谢标志物呈正相关,特别是甘油三酯(TG)(OR:19.959;95%CI:1.269-3.022;PFDR=0.004)和糖化血红蛋白(HbA1c)(OR:2.462;95%CI:1.34-4.649;PFDR=0.007).最后,在PM2.5浓度和新型肥胖相关生物标志物成纤维细胞生长因子21(FGF-21)水平之间观察到显著负相关(OR:0.148;95%CI:0.025-0.89;PFDR=0.037).在调整混杂因素后,包括外部烟雾暴露,身体活动,教育程度(EA),参加体育俱乐部或健身房休闲活动,和汤森德招聘剥夺指数(TDI),MVMR分析显示,PM2.5水平与胰腺脂肪保持显著关联,HbA1c,FGF-21
    我们的MR研究最终证明,较高的PM2.5浓度与肥胖相关指标(如胰腺脂肪含量)的风险增加有关。HbA1c,FGF-21潜在的机制需要额外的调查。
    UNASSIGNED: In recent years, the prevalence of obesity has continued to increase as a global health concern. Numerous epidemiological studies have confirmed the long-term effects of exposure to ambient air pollutant particulate matter 2.5 (PM2.5) on obesity, but their relationship remains ambiguous.
    UNASSIGNED: Utilizing large-scale publicly available genome-wide association studies (GWAS), we conducted univariate and multivariate Mendelian randomization (MR) analyses to assess the causal effect of PM2.5 exposure on obesity and its related indicators. The primary outcome given for both univariate MR (UVMR) and multivariate MR (MVMR) is the estimation utilizing the inverse variance weighted (IVW) method. The weighted median, MR-Egger, and maximum likelihood techniques were employed for UVMR, while the MVMR-Lasso method was applied for MVMR in the supplementary analyses. In addition, we conducted a series of thorough sensitivity studies to determine the accuracy of our MR findings.
    UNASSIGNED: The UVMR analysis demonstrated a significant association between PM2.5 exposure and an increased risk of obesity, as indicated by the IVW model (odds ratio [OR]: 6.427; 95% confidence interval [CI]: 1.881-21.968; P FDR = 0.005). Additionally, PM2.5 concentrations were positively associated with fat distribution metrics, including visceral adipose tissue (VAT) (OR: 1.861; 95% CI: 1.244-2.776; P FDR = 0.004), particularly pancreatic fat (OR: 3.499; 95% CI: 2.092-5.855; PFDR =1.28E-05), and abdominal subcutaneous adipose tissue (ASAT) volume (OR: 1.773; 95% CI: 1.106-2.841; P FDR = 0.019). Furthermore, PM2.5 exposure correlated positively with markers of glucose and lipid metabolism, specifically triglycerides (TG) (OR: 19.959; 95% CI: 1.269-3.022; P FDR = 0.004) and glycated hemoglobin (HbA1c) (OR: 2.462; 95% CI: 1.34-4.649; P FDR = 0.007). Finally, a significant negative association was observed between PM2.5 concentrations and levels of the novel obesity-related biomarker fibroblast growth factor 21 (FGF-21) (OR: 0.148; 95% CI: 0.025-0.89; P FDR = 0.037). After adjusting for confounding factors, including external smoke exposure, physical activity, educational attainment (EA), participation in sports clubs or gym leisure activities, and Townsend deprivation index at recruitment (TDI), the MVMR analysis revealed that PM2.5 levels maintained significant associations with pancreatic fat, HbA1c, and FGF-21.
    UNASSIGNED: Our MR study demonstrates conclusively that higher PM2.5 concentrations are associated with an increased risk of obesity-related indicators such as pancreatic fat content, HbA1c, and FGF-21. The potential mechanisms require additional investigation.
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  • 文章类型: Journal Article
    重金属,无处不在的环境,构成全球公共卫生问题。这些与糖尿病肾病(DKD)之间的相关性尚不清楚。我们的目的是探讨重金属暴露与DKD发病率之间的相关性。
    我们分析了来自NHANES(2005-2020)的数据,使用机器学习,和横断面调查。我们的研究还涉及双向双样本孟德尔随机化(MR)分析。
    机器学习揭示了尿Ba和尿Tl与DKD的相关系数为-0.5059和-0.6510,分别。多因素logistic回归暗示尿Ba,尿Pb,血Cd,和血铅作为DKD的潜在缔合物。当针对所有协变量进行调整时,比值比和95%置信区间为0.87(0.78,0.98)(p=0.023),0.70(0.53,0.92)(p=0.012),0.53(0.34,0.82)(p=0.005),依次为0.76(0.64,0.90)(p=0.002)。此外,尿Ba和尿Sb之间的多重相互作用,尿镉和尿钴,尿镉和尿铅,血镉和血汞可能存在。在糖尿病人群中,DKD的尿Tl的OR仅为0.10,95CI为(0.01,0.74),模型3中的尿Co0.73(0.54,0.98),模型2中的尿Pb0.72(0.55,0.95)。限制性三次样条(RCS)表明普通人群中的血液Cd与尿Co之间存在线性联系,尿Pb,糖尿病患者中DKD的尿Tl。在具有DKD的尿Pb和尿Tl之间存在可观察到的趋势效应。MR分析显示,血液Cd和血液Mn的比值比和95%置信区间为1.16(1.03,1.32)(p=0.018)和1.17(1.00,1.36)(p=0.044),分别。
    在一般人群中,尿Ba与DKD呈非线性逆相关,而在糖尿病人群中,尿Tl与DKD呈线性反比关系。
    UNASSIGNED: Heavy metals, ubiquitous in the environment, pose a global public health concern. The correlation between these and diabetic kidney disease (DKD) remains unclear. Our objective was to explore the correlation between heavy metal exposures and the incidence of DKD.
    UNASSIGNED: We analyzed data from the NHANES (2005-2020), using machine learning, and cross-sectional survey. Our study also involved a bidirectional two-sample Mendelian randomization (MR) analysis.
    UNASSIGNED: Machine learning reveals correlation coefficients of -0.5059 and - 0.6510 for urinary Ba and urinary Tl with DKD, respectively. Multifactorial logistic regression implicates urinary Ba, urinary Pb, blood Cd, and blood Pb as potential associates of DKD. When adjusted for all covariates, the odds ratios and 95% confidence intervals are 0.87 (0.78, 0.98) (p = 0.023), 0.70 (0.53, 0.92) (p = 0.012), 0.53 (0.34, 0.82) (p = 0.005), and 0.76 (0.64, 0.90) (p = 0.002) in order. Furthermore, multiplicative interactions between urinary Ba and urinary Sb, urinary Cd and urinary Co, urinary Cd and urinary Pb, and blood Cd and blood Hg might be present. Among the diabetic population, the OR of urinary Tl with DKD is a mere 0.10, with a 95%CI of (0.01, 0.74), urinary Co 0.73 (0.54, 0.98) in Model 3, and urinary Pb 0.72 (0.55, 0.95) in Model 2. Restricted Cubic Splines (RCS) indicate a linear linkage between blood Cd in the general population and urinary Co, urinary Pb, and urinary Tl with DKD among diabetics. An observable trend effect is present between urinary Pb and urinary Tl with DKD. MR analysis reveals odds ratios and 95% confidence intervals of 1.16 (1.03, 1.32) (p = 0.018) and 1.17 (1.00, 1.36) (p = 0.044) for blood Cd and blood Mn, respectively.
    UNASSIGNED: In the general population, urinary Ba demonstrates a nonlinear inverse association with DKD, whereas in the diabetic population, urinary Tl displays a linear inverse relationship with DKD.
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  • 文章类型: Journal Article
    1型糖尿病(T1DM)经常与各种感染有关,包括真菌病;然而,T1DM与真菌感染之间的直接联系仍未得到充分研究.这项研究利用孟德尔随机化(MR)方法来研究T1DM和真菌病之间的潜在因果关系。
    与T1DM相关的遗传变异来自欧洲生物信息学研究所的数据库,而那些与真菌感染有关的,如念珠菌病,肺孢子虫病,曲霉病是从Finngen数据库获得的,关注欧洲人口。主要分析使用逆方差加权(IVW)方法进行,从孟德尔随机化Egger回归(MR-Egger)获得更多见解。广泛的敏感性分析评估了稳健性,多样性,以及我们发现的潜在水平多效性。多变量孟德尔随机化(MVMR)用于调整混杂因素,使用MVMR-IVW和MVMR-Egger评估异质性和多效性。
    基因,T1DM患者发生念珠菌病的几率增加5%,根据IVW方法测定(OR=1.05;95%CI1.02-1.07,p=0.0001),Bonferroni调整的p值为0.008。敏感性分析表明没有明显的异质性或多效性问题。对混杂因素的调整,如体重指数,糖化血红蛋白水平,白细胞计数进一步支持这些发现(OR=1.08;95%CI:1.03-1.13,p=0.0006).免疫细胞计数的额外调整,包括CD4和CD8T细胞和自然杀伤细胞,也显示了显着的结果(OR=1.04;95%CI:1.02-1.06,p=0.0002)。在T1DM和其他真菌感染如曲霉病或肺孢子病之间没有发现因果关系。
    这项MR研究提示T1DM患者对念珠菌病易感性增加的遗传倾向。然而,T1DM和其他霉菌病之间没有因果关系,包括曲霉病和肺囊肿。
    UNASSIGNED: Type 1 diabetes mellitus (T1DM) is frequently associated with various infections, including mycoses; however, the direct link between T1DM and fungal infections remains under-researched. This study utilizes a Mendelian randomization (MR) approach to investigate the potential causal relationship between T1DM and mycoses.
    UNASSIGNED: Genetic variants associated with T1DM were sourced from the European Bioinformatics Institute database, while those related to fungal infections such as candidiasis, pneumocystosis, and aspergillosis were obtained from the Finngen database, focusing on European populations. The primary analysis was conducted using the inverse variance weighted (IVW) method, with additional insight from Mendelian randomization Egger regression (MR-Egger). Extensive sensitivity analyses assessed the robustness, diversity, and potential horizontal pleiotropy of our findings. Multivariable Mendelian randomization (MVMR) was employed to adjust for confounders, using both MVMR-IVW and MVMR-Egger to evaluate heterogeneity and pleiotropy.
    UNASSIGNED: Genetically, the odds of developing candidiasis increased by 5% in individuals with T1DM, as determined by the IVW method (OR = 1.05; 95% CI 1.02-1.07, p = 0.0001), with a Bonferroni-adjusted p-value of 0.008. Sensitivity analyses indicated no significant issues with heterogeneity or pleiotropy. Adjustments for confounders such as body mass index, glycated hemoglobin levels, and white blood cell counts further supported these findings (OR = 1.08; 95% CI:1.03-1.13, p = 0.0006). Additional adjustments for immune cell counts, including CD4 and CD8 T cells and natural killer cells, also demonstrated significant results (OR = 1.04; 95% CI: 1.02-1.06, p = 0.0002). No causal associations were found between T1DM and other fungal infections like aspergillosis or pneumocystosis.
    UNASSIGNED: This MR study suggests a genetic predisposition for increased susceptibility to candidiasis in individuals with T1DM. However, no causal links were established between T1DM and other mycoses, including aspergillosis and pneumocystosis.
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  • 文章类型: Journal Article
    背景:观察性研究发现了两种自身免疫性疾病之间的联系,即,原发性硬化性胆管炎(PSC)和系统性红斑狼疮(SLE)。然而,关系尚不清楚。
    方法:双向孟德尔随机化(MR)分析和统计学方法,包括方差逆加权,加权中位数,和MR-Egger测试,使用来自全基因组关联研究的数据来检测PSC和SLE之间的因果关系。随后进行敏感性分析以评估结果的稳健性。还研究了单变量MR方法。
    结果:MR分析结果表明,PSC与SLE风险增加有关(比值比:1.33,95%置信区间:1.10-1.61,P=0.0039)。SLE与PSC无显著因果关系。
    结论:MR分析结果显示,PSC患者患SLE的风险增加,这为这两种自身免疫性疾病之间的关系提供了新的见解。
    BACKGROUND: Observational studies have found a link between two autoimmune diseases, namely, primary sclerosing cholangitis (PSC) and systemic lupus erythematosus (SLE). However, the relationship remains unclear.
    METHODS: Bidirectional Mendelian randomization (MR) analysis and statistical methods, including inverse variance weighting, weighted median, and MR-Egger tests, were performed using data from genome-wide association studies to detect a causal relationship between PSC and SLE. Sensitivity analyses were subsequently performed to assess the robustness of the results. Univariate MR methods were also investigated.
    RESULTS: Results of MR analysis suggested that PSC was associated with an increased risk for SLE (odds ratio: 1.33, 95% confidence interval: 1.10-1.61, P=0.0039) However, SLE had no significant causal relationship with PSC.
    CONCLUSIONS: Results of MR analysis revealed that patients with PSC were at an increased risk for SLE, which provides new insights into the relationship between these two autoimmune diseases.
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  • 文章类型: Journal Article
    背景:先前的观察性研究表明,免疫介导的炎症性疾病(IMID)与牙周病之间存在双向关联。然而,关于IMID和牙周病的因果作用的证据仍然缺乏。因此,我们进行了一项双向双样本孟德尔随机化(MR)研究,以揭示IMID与牙周病之间的潜在遗传因果效应.
    方法:采用双向双样本MR分析。10个IMID的数据来自FinnGen联盟进行的全基因组关联研究(GWAS)(范围为1023至36321例)和英国生物库(UKB)(范围为150至17574例)。此外,牙周疾病的GWAS数据来自FinnGen协会(87497例),UKB(458例),和基因生活方式相互作用在牙科终点(GLIDE)联盟(17,353例牙周炎)。随后,通过随机效应方差反加权分析因果关系,加权中位数,还有MR-Egger.使用CochraneQ检验进行敏感性分析,漏斗图,和Mr-Egger截距测试,以确保鲁棒性。最终,在不同数据库中进行复制分析和荟萃分析.
    结果:系统性红斑狼疮(SLE)[IVW:OR=1.079(95%CI:1.032-1.128)和P<0.001],干燥综合征[IVW:OR=1.082(95%CI:1.012-1.157)和P=0.022]和甲状腺功能减退[IVW:OR=1.52(95%CI:1.13-2.04)和P=0.005]可能增加牙周病的风险。此外,牙周病可降低SLE[IVW:OR=0.8079(95%CI:0.6764-0.9650),P=0.019]和甲状腺功能亢进[IVW:OR=5.59*10-9(95%CI:1.43*10-15-2.18*10-2),P=0.014]的风险.荟萃分析表明SLE与牙周病风险增加之间存在因果关系:[OR=1.08(95%CI:1.03-1.13),P=0.0009]。没有重要证据表明其他IMID与牙周病之间存在双边因果关系。没有检测到异质性或多效性的显著估计。
    结论:我们的研究证实了IMID与牙周病之间的遗传因果关系,从而揭示了IMID和牙周病潜在的新机制。这一发现有望促进临床医生和口腔医师之间的跨学科合作,以促进适当和精确的筛查。预防,以及IMID和牙周病的早期治疗。
    BACKGROUND: Previous observational studies have shown a bidirectional association between immune-mediated inflammatory disorders (IMID) and periodontal disease. However, evidence regarding the causal role of IMID and periodontal disease is still lacking. Therefore, we conducted a bidirectional two-sample Mendelian randomization (MR) study to uncover the potential genetic causal effects between IMID and periodontal disease.
    METHODS: Bidirectional two-sample MR analysis was employed. Data for ten IMIDs were sourced from genome-wide association studies (GWAS) conducted by the FinnGen Consortium (range from 1023 to 36321 cases) and UK Biobank (UKB) (range from 150 to 17574 cases). Furthermore, GWAS data for periodontal disease were obtained from the FinnGen Consortium (87497 cases), UKB (458 cases), and Gene Lifestyle Interactions in Dental Endpoints (GLIDE) consortium (17,353 periodontitis cases). Subsequently, the causal relationships were analyzed by random effects inverse variance weighting, weighted median, and MR-Egger. Sensitivity analyses were performed using the Cochrane Q test, funnel plot, and Mr-Egger intercept test to ensure robustness. Eventually, replication analysis and meta-analysis across different databases were carried out.
    RESULTS: Systemic lupus erythematosus (SLE) [IVW: OR = 1.079 (95% CI: 1.032-1.128) and P < 0.001], Sjogren syndrome [IVW: OR = 1.082 (95% CI: 1.012-1.157) and P = 0.022] and hypothyroidism [IVW: OR = 1.52 (95% CI: 1.13-2.04) and P = 0.005] may increase the risk of periodontal disease. In addition, periodontal disease may reduce the risk of SLE [IVW: OR = 0.8079 (95% CI: 0.6764-0.9650) and P = 0.019] and hyperthyroidism [IVW: OR = 5.59*10-9 (95% CI: 1.43*10-15-2.18*10-2) and P = 0.014]. Meta-analysis indicated a causal correlation between SLE and an increased risk of periodontal disease: [OR = 1.08 (95% CI: 1.03-1.13), P = 0.0009]. No significant evidence suggests bilateral causal relationships between other IMIDs and periodontal disease. No significant estimation of heterogeneity or pleiotropy is detected.
    CONCLUSIONS: Our study has confirmed a genetic causal relationship between IMIDs and periodontal disease, thereby unveiling novel potential mechanisms underlying IMIDs and periodontal disease. This discovery is promising in fostering interdisciplinary collaboration between clinicians and stomatologists to facilitate appropriate and precise screening, prevention, and early treatment of IMIDs and periodontal disease.
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  • 文章类型: Journal Article
    特发性突发性感觉神经性听力损失(ISSHL)是一种突然发作,原因不明的感觉神经性听力损失.抑郁症是一种常见的精神障碍和残疾的主要原因。这里,我们使用双样本孟德尔随机化方法,使用来自ISSHL全基因组关联研究的汇总统计数据(1491例,196,592名对照)和抑郁症(23,424例,192,220个对照)在欧洲人口中。本研究使用逆方差加权研究了与抑郁症相关的单核苷酸多态性与ISSHL之间的双向关系。额外的敏感性分析,如孟德尔随机化-Egger(MR-Egger),加权中位数估计,和遗漏分析,进行评估结果的可靠性。在随机效应IVW方法中,对ISSHL的遗传易感性与抑郁症之间存在显着因果关系(OR=1.037,95%CI=1.004-1.072,P=0.030)。相比之下,遗传性抑郁不是ISSHL的危险因素(OR=1.134,95%CI=0.871~1.475,P=0.350)。通过不同的MR方法验证和敏感性分析,所有上述结果是一致的。我们收集的证据表明ISSHL与抑郁症之间存在因果关系。前者的存在诱发或进一步加剧后者,而当后者是影响因素时,就不存在类似的情况。
    Idiopathic Sudden Sensorineural Hearing Loss (ISSHL) is a sudden onset, unexplained sensorineural hearing loss. Depression is a common mental disorder and a leading cause of disability. Here, We used a two-sample Mendelian randomization approach using pooled statistics from genome-wide association studies of ISSHL (1491 cases, 196,592 controls) and depression (23,424 cases, 192,220 controls) in European populations. This study investigated the bidirectional relationship between single nucleotide polymorphisms associated with depression and ISSHL using inverse variance weighting.Additional sensitivity analyses, such as Mendelian randomization-Egger (MR-Egger), weighted median estimates, and leave-one-out analysis, were performed to assess the reliability of the findings. Significant causal association between genetic susceptibility to ISSHL and depression in a random-effects IVW approach (OR = 1.037, 95% CI = 1.004-1.072, P = 0.030). In contrast, genetic depression was not risk factors for ISSHL (OR = 1.134, 95% CI = 0.871-1.475, P = 0.350). After validation by different MR methods and the sensitivity analysis, all of the above results are consistent. The evidence we have gathered suggests a causal relationship between ISSHL and depression. The presence of the former induces or further exacerbates the latter, whereas a similar situation does not exist when the latter is an influencing factor.
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  • 文章类型: Journal Article
    自我报告较短/较长的睡眠持续时间,失眠,在观察性分析中,晚上偏好与高血糖有关,在使用加速度计衍生的睡眠特征的小型研究中也有类似的观察结果。孟德尔随机化(MR)研究支持自我报告失眠的影响,但不是其他人,糖化血红蛋白(HbA1c)。为了探索潜在的影响,我们使用MR方法来评估加速度计衍生的睡眠特征(持续时间,中点最小活动5小时,中点最活跃10小时,睡眠碎片,和效率)来自英国生物库(UKB)(n=73,797)和MAGIC财团(n=146,806)的欧洲成年人的HbA1c/葡萄糖。应用跨性状连锁不平衡评分回归来确定加速度计衍生的遗传相关性,自我报告的睡眠特征,和HbA1c/葡萄糖。我们发现任何加速度计衍生的睡眠特征对HbA1c或葡萄糖没有因果关系。UKB子样本中自我报告的睡眠特征的类似MR结果与加速度计得出的测量值表明,我们的结果并未通过选择偏差来解释。表型和遗传相关性分析表明,自我报告和加速度计衍生的性状之间存在复杂的关系,表明它们可能反映了不同类型的暴露。这些发现表明,加速度计衍生的睡眠特征不会影响HbA1c。由加速度计得出的睡眠持续时间和质量的度量可能不仅仅是自我报告的睡眠持续时间和失眠的“客观”度量,而是捕捉到了不同的睡眠特征。
    Self-reported shorter/longer sleep duration, insomnia, and evening preference are associated with hyperglycaemia in observational analyses, with similar observations in small studies using accelerometer-derived sleep traits. Mendelian randomization (MR) studies support an effect of self-reported insomnia, but not others, on glycated haemoglobin (HbA1c). To explore potential effects, we used MR methods to assess effects of accelerometer-derived sleep traits (duration, mid-point least active 5-h, mid-point most active 10-h, sleep fragmentation, and efficiency) on HbA1c/glucose in European adults from the UK Biobank (UKB) (n = 73,797) and the MAGIC consortium (n = 146,806). Cross-trait linkage disequilibrium score regression was applied to determine genetic correlations across accelerometer-derived, self-reported sleep traits, and HbA1c/glucose. We found no causal effect of any accelerometer-derived sleep trait on HbA1c or glucose. Similar MR results for self-reported sleep traits in the UKB sub-sample with accelerometer-derived measures suggested our results were not explained by selection bias. Phenotypic and genetic correlation analyses suggested complex relationships between self-reported and accelerometer-derived traits indicating that they may reflect different types of exposure. These findings suggested accelerometer-derived sleep traits do not affect HbA1c. Accelerometer-derived measures of sleep duration and quality might not simply be \'objective\' measures of self-reported sleep duration and insomnia, but rather captured different sleep characteristics.
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