COL1A1 gene

  • 文章类型: Case Reports
    背景:尽管某些遗传成分已被报道为导致Perthes病的因素,其病因尚不清楚。我们介绍了一例罕见的Perthes病病例,该病例是由COL1A1基因突变(NM_000088)引起的成骨不全症(OI):exon25:c.1726C>T,(p.Gln576X)。病例介绍:2016年3月,一名7岁男孩最初在我们的医疗机构接受治疗,有右髋关节慢性疼痛史,跛行一年。他被诊断为右髋关节的Perthes病。他接受了髋臼截骨术和同侧股骨近端内翻截骨术,以更好地容纳。在后续行动中,右髋部表现出正常的活动范围,没有疼痛,骨盆X线显示StulbergII型髋关节,股骨头圆形。在2022年的最新入院中,他在轻微暴力后患有右股骨干骨折。回顾了他的病史后,他被怀疑有OI.全外显子组测序显示COL1A1(OMIM166200)基因突变,并证实了OI的诊断。采用伸缩钉治疗股骨干骨折。在右股骨钉后,下肢的外观看起来正常且对称。结论:这项研究表明,OI与Perthes病之间可能存在关联。我们的病例报告丰富了成骨不全症的表型,并提供了对LCPD发病机理的见解。
    Background: Although certain genetic components have been reported as contributing factors for Perthes disease, its etiology remains unclear. We present a rare case of Perthes disease in a child with osteogenesis imperfecta (OI) caused by a mutation in the COL1A1 gene (NM_000088):exon25:c.1726C>T, (p.Gln576X). Case presentations: A 7-year-old boy was initially treated at our medical facility in March 2016 with a history of chronic pain in right hip joint and limping for a year. He was diagnosed as Perthes disease in the right hip joint. He underwent acetabular osteotomy and ipsilateral proximal femoral varus osteotomy for better containment. During the follow-ups, the right hip demonstrated a normal range of motion without pain, and the pelvic X-ray demonstrated Stulberg Type II hip joint with a round femoral head. In the latest admission in 2022, he suffered from a right femoral shaft fracture after petty violence. After reviewing his medical history, he was suspected of having OI. The whole exome sequencing demonstrated a gene mutation in COL1A1 (OMIM 166200) and confirmed the diagnosis of OI. Telescopic nailing was used to treat the femoral shaft fracture. After the nailing of the right femur, the appearance of the lower extremity seemed normal and symmetrical. Conclusion: This study revealed that there might be an association between OI and Perthes disease. Our case report enriches the phenotypes of osteogenesis imperfecta and provides insight into the pathogenesis of LCPD.
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  • 文章类型: Journal Article
    成骨不全症(OI)是一种遗传性疾病,估计患病率为13,500中的1和9700中的1。OI亚型的分类对于预后和管理很重要。在这项研究中,我们根据COL1A1/2基因变异的多个特征建立了临床严重程度预测模型.
    背景:90%的OI病例是由COL1A1/COL1A2基因的致病变异引起的。Sillence分类描述了四种OI类型,具有从轻度症状到致命和逐渐变形症状的可变临床特征。
    方法:我们基于随机森林模型,使用从人类基因突变数据库获得的训练集,建立了OI临床严重程度的预测模型,包括COL1A1/COL1A2基因的790条记录。预测模型中使用的特征分别仅基于变体类型特征,和优化的功能。
    结果:使用训练集,预测结果表明,预测重度OI或轻度/中度OI致死性的受试者工作特征曲线下面积(AUC)分别为0.767和0.902,当仅使用变体类型特征和COL1A1缺陷的优化特征时,分别为0.545和0.731,COL1A2缺陷。对于我们医院的17名患者,COL1A1和COL1A2缺陷患者的预测准确率分别为76.5%(95%CI:50.1-93.2%)和88.2%(95%CI:63.6-98.5%),分别。
    结论:我们根据COL1A1/2基因中特定变异的多个特征建立了OI严重程度预测模型,预测准确率为76-88%。这种预测算法是一种有前途的替代方案,可以证明在临床实践中很有价值。
    Osteogenesis imperfecta (OI) is a genetic disease with an estimated prevalence of 1 in 13,500 and 1 in 9700. The classification into subtypes of OI is important for prognosis and management. In this study, we established a clinical severity prediction model depending on multiple features of variants in COL1A1/2 genes.
    BACKGROUND: Ninety percent of OI cases are caused by pathogenic variants in the COL1A1/COL1A2 gene. The Sillence classification describes four OI types with variable clinical features ranging from mild symptoms to lethal and progressively deforming symptoms.
    METHODS: We established a prediction model of the clinical severity of OI based on the random forest model with a training set obtained from the Human Gene Mutation Database, including 790 records of the COL1A1/COL1A2 genes. The features used in the prediction model were respectively based on variant-type features only, and the optimized features.
    RESULTS: With the training set, the prediction results showed that the area under the receiver operating characteristic curve (AUC) for predicting lethal to severe OI or mild/moderate OI was 0.767 and 0.902, respectively, when using variant-type features only and optimized features for COL1A1 defects, 0.545 and 0.731, respectively, for COL1A2 defects. For the 17 patients from our hospital, prediction accuracy for the patient with the COL1A1 and COL1A2 defects was 76.5% (95% CI: 50.1-93.2%) and 88.2% (95% CI: 63.6-98.5%), respectively.
    CONCLUSIONS: We established an OI severity prediction model depending on multiple features of the specific variants in COL1A1/2 genes, with a prediction accuracy of 76-88%. This prediction algorithm is a promising alternative that could prove to be valuable in clinical practice.
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  • 文章类型: Case Reports
    BACKGROUND: Osteogenesis imperfecta (OI) is a rare disease characterized by increased bone fragility and predisposition to fractures, bone deformities and other major signs such as dentinogenesis imperfecta, blue sclera and deafness. Over 90% of OI cases are caused by mutations in the COL1A1 and COL1A2 genes and the inheritance is autosomal dominant.
    METHODS: We present a case of a couple requesting genetic counseling, because the man was diagnosed with OI on a clinical and radiological basis and the woman was pregnant. Whole exomes sequencing (WES) was performed in order to identify the mutation (s), followed by prenatal diagnosis.
    RESULTS: WES identified a rare splicing mutation c.1155 + 1G > C in the COL1A1 gene recognized to be pathogenic and subsequently confirmed by next generation sequencing. The carrier state of the mutation was excluded for the fetus, so the pregnancy was further pursued and a healthy baby was born at term.
    CONCLUSIONS: WES is a new and effective technique for detecting pathogenic variants in monogenic diseases and it is preferable to use such a technique in diseases with genetic heterogeneity especially when time does not allow another time-consuming diagnostic technique such classical Sanger sequencing. WES offers possibility to expand the global spectrum of OI pathogenic variants enabling the diagnosis of the disease.
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  • 文章类型: Journal Article
    CONCLUSIONS: The two discovered mutations in COL1A1 gene, although first reported in China, are recurrent ones that have also been found elsewhere in type I osteogenesis imperfecta patients, suggesting their role in pathogenesis of Van der Hoeve syndrome.
    OBJECTIVE: The aim of this study is to find mutational patterns of COL1A1 gene that may account for the putative Van der Hoeve syndrome in the patients carrying symptoms of osteogenesis imperfecta, blue sclera, and conductive deafness.
    METHODS: Genomic DNA was extracted from the blood of each patient and exons of COL1A1 gene were amplified using PCR and sequenced.
    RESULTS: Sequencing in some of the two family members revealed point mutations in exon 26 (c.1792C > T) and exon 43 (c.3076C > T) of COL1A1 gene, respectively.
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  • 文章类型: Journal Article
    OBJECTIVE: The aim of this study was to examine the association of +1245G/T polymorphisms in the COL1A1 gene with ACL ruptures in Polish male recreational skiers in a case-control study.
    METHODS: A total of 138 male recreational skiers with surgically diagnosed primary ACL ruptures, all of whom qualified for ligament reconstruction, were recruited for this study. The control group comprised 183 apparently healthy male skiers with a comparable level of exposure to ACL injury, none of whom had any self-reported history of ligament or tendon injury. DNA samples extracted from the oral epithelial cells were genotyped for the +1245G/T polymorphisms using real-time PCR method.
    RESULTS: Genotype distributions among cases and controls conformed to Hardy-Weinberg equilibrium (p = 0.2469 and p = 0.33, respectively). There was a significant difference in the genotype distribution between skiers and controls (p = 0.045, Fisher\'s exact test). There was no statistical difference in allele distribution: OR 1.43 (0.91-2.25), p = 0.101 (two-sided Fisher\'s exact test).
    CONCLUSIONS: The risk of ACL ruptures was around 1.43 times lower in carriers of a minor allele G as compared to carriers of the allele T.
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