tumours

肿瘤
  • 文章类型: Journal Article
    对于前列腺癌(PCa)的多阶段进展和对免疫疗法的耐药性,肿瘤相关巨噬细胞是一个重要的贡献者。尽管免疫疗法是一种重要且有前途的癌症治疗方式,大多数PCa患者对它没有反应。除了探索新的治疗靶点,必须识别对免疫治疗高度敏感的个体.本研究旨在建立签名风险模型,来源于巨噬细胞,评估免疫治疗反应和预测预后。来自UCSC-XENA的数据,提取GEO和TISCH数据库进行分析。基于单细胞数据集和批量转录组概况,使用基因集变异分析构建由10个基因组组成的巨噬细胞相关评分(MRS).MRS与缺氧高度相关,血管生成,和上皮-间质转化,表明其作为风险指标的潜力。此外,在不同免疫治疗队列的高MRS组中观察到较差的免疫治疗反应和较差的预后表现.此外,APOE,MRS的组成基因之一,影响巨噬细胞的极化。特别是,在植入载脂蛋白E敲除小鼠的PCa异种移植物中观察到M2巨噬细胞水平降低和肿瘤进展抑制。构建的MRS具有作为强大的预后预测工具的潜力,可以帮助选择PCa的治疗方法,尤其是免疫疗法。
    For the multistage progression of prostate cancer (PCa) and resistance to immunotherapy, tumour-associated macrophage is an essential contributor. Although immunotherapy is an important and promising treatment modality for cancer, most patients with PCa are not responsive towards it. In addition to exploring new therapeutic targets, it is imperative to identify highly immunotherapy-sensitive individuals. This research aimed to establish a signature risk model, which derived from the macrophage, to assess immunotherapeutic responses and predict prognosis. Data from the UCSC-XENA, GEO and TISCH databases were extracted for analysis. Based on both single-cell datasets and bulk transcriptome profiles, a macrophage-related score (MRS) consisting of the 10-gene panel was constructed using the gene set variation analysis. MRS was highly correlated with hypoxia, angiogenesis, and epithelial-mesenchymal transition, suggesting its potential as a risk indicator. Moreover, poor immunotherapy responses and worse prognostic performance were observed in the high-MRS group of various immunotherapy cohorts. Additionally, APOE, one of the constituent genes of the MRS, affected the polarisation of macrophages. In particular, the reduced level of M2 macrophage and tumour progression suppression were observed in PCa xenografts which implanted in Apolipoprotein E-knockout mice. The constructed MRS has the potential as a robust prognostic prediction tool, and can aid in the treatment selection of PCa, especially immunotherapy options.
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  • 文章类型: Journal Article
    与内质网应激(ERS)和线粒体自噬相关的基因有助于预测实体瘤的预后。作者旨在开发这些基因在肺腺癌(LUAD)中的预后预测模型。从包括基因表达综合(GEO)和癌症基因组图谱(TCGA)的公共数据库收集相关基因表达和临床信息。最终在LUAD数据集中选择了总共265个差异表达的基因(71个上调和194个下调)。其中,15个候选ERS和线粒体自噬基因(ATG12,CSNK2A1,MAP1LC3A,MAP1LC3B,MFN2,PGAM5,PINK1,RPS27A,SQSTM1、SRC、UBA52UBB,UBC,根据与ERS和线粒体自噬基因杂交后的表达分析,ULK1和VDAC1)可能对LUAD至关重要。预测模型证明了有效预测5-,3-,GEO和TCGA数据库中LUAD患者的1年预后。此外,高VDAC1表达与LUAD患者总生存率低相关(p<0.001),提示它可能是LUAD预后预测的关键基因。总的来说,基于LUAD中ERS和线粒体自噬基因的预后模型可用于评估LUAD患者的预后,和VDAC1可能作为LUAD预后的有希望的生物标志物。
    Genes associated with endoplasmic reticulum stress (ERS) and mitophagy can be conducive to predicting solid tumour prognosis. The authors aimed to develop a prognosis prediction model for these genes in lung adenocarcinoma (LUAD). Relevant gene expression and clinical information were collected from public databases including Gene Expression Omnibus (GEO) and The Cancer Genome Atlas (TCGA). A total of 265 differentially expressed genes was finally selected (71 up-regulated and 194 downregulated) in the LUAD dataset. Among these, 15 candidate ERS and mitophagy genes (ATG12, CSNK2A1, MAP1LC3A, MAP1LC3B, MFN2, PGAM5, PINK1, RPS27A, SQSTM1, SRC, UBA52, UBB, UBC, ULK1, and VDAC1) might be critical to LUAD based on the expression analysis after crossing with the ERS and mitochondrial autophagy genes. The prediction model demonstrated the ability to effectively predict the 5-, 3-, and 1-year prognoses of LUAD patients in both GEO and TCGA databases. Moreover, high VDAC1 expression was associated with poor overall survival in LUAD (p < 0.001), suggesting it might be a critical gene for LUAD prognosis prediction. Overall, the prognosis model based on ERS and mitophagy genes in LUAD can be useful for evaluating the prognosis of patients with LUAD, and VDAC1 may serve as a promising biomarker for LUAD prognosis.
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  • 文章类型: Journal Article
    铁死亡是一种独特的细胞死亡模式,通过依赖铁离子和脂质过氧化物的积累来区别于典型的细胞凋亡。在某些病理背景下,细胞表现出氧化应激和抗氧化平衡之间的失衡,比如肿瘤,导致氧化应激。值得注意的是,最近的研究表明,由于氧化应激引起的细胞内活性氧(ROS)的增加可以提高细胞对铁凋亡诱导剂的敏感性或加速铁凋亡的发生。因此,了解ROS在铁凋亡启动中的作用对阐明与氧化应激相关的疾病具有重要意义。此外,对铁死亡的机制和控制的详尽探索可能为解决特定肿瘤类型提供新的靶标。在此背景下,我们的综述探讨了最近的基本途径和铁性凋亡的分子基础。四个经典的铁分子途径被很好地表征,即,谷胱甘肽过氧化物酶4中心分子途径,核因子红系2相关因子2分子途径,线粒体分子途径,和mTOR依赖性自噬途径。此外,我们试图阐明ROS制定的监管贡献。此外,我们概述了针对铁凋亡的4种分子途径的靶向药物及其潜在的临床应用.这里,我们综述了ROS和氧化应激在铁死亡中的作用,我们讨论了将铁凋亡作为癌症治疗新策略的机会,并指出了当前在ROS调节的抗癌药物研究和开发领域中持续存在的挑战。
    Ferroptosis is a distinct mode of cell death, distinguishing itself from typical apoptosis by its reliance on the accumulation of iron ions and lipid peroxides. Cells manifest an imbalance between oxidative stress and antioxidant equilibrium during certain pathological contexts, such as tumours, resulting in oxidative stress. Notably, recent investigations propose that heightened intracellular reactive oxygen species (ROS) due to oxidative stress can heighten cellular susceptibility to ferroptosis inducers or expedite the onset of ferroptosis. Consequently, comprehending role of ROS in the initiation of ferroptosis has significance in elucidating disorders related to oxidative stress. Moreover, an exhaustive exploration into the mechanism and control of ferroptosis might offer novel targets for addressing specific tumour types. Within this context, our review delves into recent fundamental pathways and the molecular foundation of ferroptosis. Four classical ferroptotic molecular pathways are well characterized, namely, glutathione peroxidase 4-centred molecular pathway, nuclear factor erythroid 2-related factor 2 molecular pathway, mitochondrial molecular pathway, and mTOR-dependent autophagy pathway. Furthermore, we seek to elucidate the regulatory contributions enacted by ROS. Additionally, we provide an overview of targeted medications targeting four molecular pathways implicated in ferroptosis and their potential clinical applications. Here, we review the role of ROS and oxidative stress in ferroptosis, and we discuss opportunities to use ferroptosis as a new strategy for cancer therapy and point out the current challenges persisting within the domain of ROS-regulated anticancer drug research and development.
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  • 文章类型: Case Reports
    黏液样胶质神经肿瘤(MGNT),先前描述为透明隔的胚胎发育不良神经上皮肿瘤,在2021年WHO中枢神经系统肿瘤分类第五版中被列为一种新的肿瘤类型。这种分类是基于它的解剖位置,成像特征,和遗传特征。MGNTs在临床上很罕见,容易误诊。在这份报告中,我们在左额叶出现MGNT,经手术病理证实。
    Myxoid glioneuronal tumour (MGNT), previously described as dysembryoplastic neuroepithelial tumour of the septum pellucidum, was classified as a new tumour type in the fifth edition of the WHO Central Nervous System Tumor Classification of 2021. This classification was based on its anatomical location, imaging features, and genetic characteristics. MGNTs are clinically rare and prone to misdiagnosis. In this report, we present a case of MGNT in the left frontal lobe, which was confirmed through surgical pathology.
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  • 文章类型: Journal Article
    当癌症患者接受手术或镇痛治疗时,经常使用阿片受体激动剂。作为临床护理中的镇痛药,阿片类药物可以提供术中或慢性癌症疼痛缓解。免疫功能在抗癌治疗中起着重要作用,细胞免疫,主要由T淋巴细胞和自然杀伤细胞组成,代表主要的抗癌免疫反应。然而,目前尚不清楚在已经免疫功能受损的癌症患者中使用阿片类药物是否会进一步影响免疫功能.本文对临床常用阿片类药物的作用进行了综述,包括吗啡,羟考酮,芬太尼和曲马多,对癌症患者免疫功能的影响。它提供了关于阿片类药物在癌症环境中的免疫调节作用以及这些相互作用的潜在机制的当前证据的总结。
    Opioid receptor agonists are often used when cancer patients undergo surgery or analgesic treatment. As analgesics in clinical care, opioids can provide intraoperative or to chronic cancer pain relief. Immune function plays an important role in anti-cancer therapy, with cellular immunity, comprised principally of T-lymphocytes and natural killer cells, representing the primary anti-cancer immune response. However, it remains unclear whether immune function is further affected with the use of opioids in already immunocompromised cancer patients. This article provides a review of the effects of commonly used clinical opioids, including morphine, oxycodone, fentanyl and tramadol, on immune function in cancer patients. It provides a summary of current evidence regarding the immunomodulatory effects of opioids in the cancer setting and mechanisms underlying these interactions.
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  • 文章类型: Journal Article
    背景:聚(ADP-核糖)聚合酶(PARP)抑制剂已成为主要针对BRCA1/2相关肿瘤的有希望的化疗药物,被称为合成杀伤力。然而,最近的临床试验报道了患者从PARP抑制剂治疗中获益,与同源重组缺陷无关。因此,迫切需要揭示PARP抑制剂超越DNA损伤修复的治疗机制,这可以促进精准医疗。
    方法:使用基于CRISPR的敲入技术来建立稳定的BRCA1突变癌细胞。通过生化和细胞生物学实验评价PARP抑制剂对BRCA1突变癌细胞的作用。最后,我们验证了其在异种移植和患者来源的异种移植(PDX)肿瘤小鼠中的体内作用。
    结果:在这项研究中,我们发现,乳腺癌中的大多数临床BRCA1突变都在基因的中间,而不是在DNA损伤修复的必要区域。代表性突变如R1085I和E1222Q在癌细胞的有丝分裂期间引起短暂的额外纺锤体极。PAR,它是由PARP2而不是PARP1在有丝分裂中心体合成的,聚集了这些瞬态额外的极点,与DNA损伤反应无关。常见的PARP抑制剂可以有效抑制PARP2合成的PAR,并通过消除有丝分裂极外误差的纠正来诱导细胞衰老。
    结论:我们的发现揭示了PARP抑制剂有效抑制肿瘤的替代机制,从而指出了中心体错误相关肿瘤的潜在新治疗策略。
    背景:国家自然科学基金(国家自然科学基金)(T2225006,82272948,82103106),北京市自然科学基金重点项目Z220011,国家临床重点专科建设计划,P.R.中国(2023年)。
    BACKGROUND: Poly(ADP-ribose) polymerase (PARP) inhibitors have emerged as promising chemotherapeutic drugs primarily against BRCA1/2-associated tumours, known as synthetic lethality. However, recent clinical trials reported patients\' survival benefits from PARP inhibitor treatments, irrelevant to homologous recombination deficiency. Therefore, revealing the therapeutic mechanism of PARP inhibitors beyond DNA damage repair is urgently needed, which can facilitate precision medicine.
    METHODS: A CRISPR-based knock-in technology was used to establish stable BRCA1 mutant cancer cells. The effects of PARP inhibitors on BRCA1 mutant cancer cells were evaluated by biochemical and cell biological experiments. Finally, we validated its in vivo effects in xenograft and patient-derived xenograft (PDX) tumour mice.
    RESULTS: In this study, we uncovered that the majority of clinical BRCA1 mutations in breast cancers were in and near the middle of the gene, rather than in essential regions for DNA damage repair. Representative mutations such as R1085I and E1222Q caused transient extra spindle poles during mitosis in cancer cells. PAR, which is synthesized by PARP2 but not PARP1 at mitotic centrosomes, clustered these transient extra poles, independent of DNA damage response. Common PARP inhibitors could effectively suppress PARP2-synthesized PAR and induce cell senescence by abrogating the correction of mitotic extra-pole error.
    CONCLUSIONS: Our findings uncover an alternative mechanism by which PARP inhibitors efficiently suppress tumours, thereby pointing to a potential new therapeutic strategy for centrosome error-related tumours.
    BACKGROUND: Funded by National Natural Science Foundation of China (NSFC) (T2225006, 82272948, 82103106), Beijing Municipal Natural Science Foundation (Key program Z220011), and the National Clinical Key Specialty Construction Program, P. R. China (2023).
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  • 文章类型: Review
    目前,肿瘤的发病率每年都在增加,和肿瘤发生通常与染色体不稳定和细胞周期失调有关。此外,染色体结构的异常通常会导致DNA损伤,进一步加剧基因突变和染色体重排。然而,已知染色体家族结构维持的非SMC凝集素I复合物亚基G(NCAPG)在肿瘤发展中发挥关键作用。已经表明NCAPG的高表达与肿瘤的发展和进展密切相关。NCAPG的过表达在细胞有丝分裂过程中不同程度地影响染色体凝聚和分离,影响细胞周期调节,促进肿瘤细胞增殖和侵袭,并抑制细胞凋亡。此外,NCAPG与肿瘤细胞干性有关,肿瘤抵抗和复发。本综述的目的是探讨NCAPG在肿瘤发展过程中的潜在机制。以期为肿瘤治疗提供新的靶标和策略,通过对相关机制的阐明,为未来健康发展奠定基础。
    At present, the incidence of tumours is increasing on a yearly basis, and tumourigenesis is usually associated with chromosomal instability and cell cycle dysregulation. Moreover, abnormalities in the chromosomal structure often lead to DNA damage, further exacerbating gene mutations and chromosomal rearrangements. However, the non‑SMC condensin I complex subunit G (NCAPG) of the structural maintenance of chromosomes family is known to exert a key role in tumour development. It has been shown that high expression of NCAPG is closely associated with tumour development and progression. Overexpression of NCAPG variously affects chromosome condensation and segregation during cell mitosis, influences cell cycle regulation, promotes tumour cell proliferation and invasion, and inhibits apoptosis. In addition, NCAPG has been associated with tumour cell stemness, tumour resistance and recurrence. The aim of the present review was to explore the underlying mechanisms of NCAPG during tumour development, with a view towards providing novel targets and strategies for tumour therapy, and through the elucidation of the mechanisms involved, to lay the foundation for future developments in health.
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  • 文章类型: Journal Article
    程序性死亡配体1(PD-L1)是控制肿瘤中T细胞活性的主要共抑制检查点因子。PD-L1在免疫细胞和肿瘤细胞上表达。肿瘤细胞表达的PD-L1是否以免疫细胞非依赖性方式影响肿瘤细胞仍然很大程度上难以捉摸。在这项研究中,我们研究了肿瘤细胞表达PD-L1的意义,重点是下游信号和脂质代谢变化。
    在体外和体内免疫缺陷小鼠中研究了PD-L1在肿瘤生长中的免疫非依赖性功能。通过全面的基于质谱的代谢组学分析在肝癌中研究了PD-L1在靶向/非靶向脂质代谢产物中的整体影响。通过甘油三酯和胆固醇测定以及肝脏油红O染色证实了对脂质代谢的影响,胰腺,乳房,和食管鳞癌.通过实时定量PCR研究了潜在的机制,蛋白质印迹分析,免疫共沉淀,下拉分析,免疫荧光染色,和RNA测序。
    PD-L1增强了甘油三酯的积累,胆固醇,和肿瘤中的脂滴。PD-L1影响肝癌中靶向/非靶向脂质代谢产物,包括脂质代谢,葡萄糖代谢,氨基酸代谢,核苷酸代谢,和能量代谢,这表明PD-L1在全球范围内调节肿瘤的代谢重编程。机械上,PD-L1通过在细胞膜中形成PD-L1/EGFR/ITGB4复合物而激活表皮生长因子受体(EGFR)和/或整合素β4(ITGB4),在激活PI3K/mTOR/SREBP1c信号之前,导致肿瘤中脂质代谢的重新编程。功能上,PD-L1介导的脂质代谢重编程以免疫细胞非依赖性方式通过EGFR和/或ITGB4在体外和体内支持肿瘤生长。
    我们对肿瘤细胞表达的PD-L1的脂肪生成和EGFR激活的研究结果表明,除了它的免疫刺激作用,抗PD-L1可能在肝癌治疗中限制脂质代谢和EGFR/ITGB4信号传导.
    在这项研究中,我们提供了PD-L1驱动肿瘤中脂质代谢重编程的证据.PD-L1与表皮生长因子受体(EGFR)和ITGB4形成复合物,激活PI3K/Akt/mTOR/SREBP1c信号通路,从而促进癌症进展中的脂质代谢。我们的发现为PD-L1启动肿瘤中脂质代谢重编程的机制提供了新的见解。从临床的角度来看,抗PD-L1抗体可能减轻抗EGFR抗体西妥昔单抗的耐药性,并抑制肿瘤中脂质代谢的重编程.
    UNASSIGNED: The programmed death-ligand 1 (PD-L1) is a major co-inhibitory checkpoint factor that controls T-cell activities in tumours. PD-L1 is expressed on immune cells and tumour cells. Whether tumour cell-expressed PD-L1 affects tumour cells in an immune cell-independent fashion remains largely elusive. In this study, we investigated the significance of tumour cell-expressed PD-L1 with a focus on downstream signals and changes in lipid metabolism.
    UNASSIGNED: Immune-independent functions of PD-L1 in tumour growth were investigated in vitro and in immuno-deficient mice in vivo. The global influence of PD-L1 in targeted/untargeted lipidomic metabolites was studied by comprehensive mass spectrometry-based metabolomic analysis in liver cancer. Effects on lipid metabolism were confirmed by triglyceride and cholesterol assays as well as by Oil Red O staining in liver, pancreatic, breast, and oesophageal squamous cancer. Underlying mechanisms were investigated by real-time quantitative PCR, Western blot analysis, co-immunoprecipitation, pull-down assays, immunofluorescence staining, and RNA sequencing.
    UNASSIGNED: PD-L1 enhanced the accumulation of triglycerides, cholesterol, and lipid droplets in tumours. PD-L1 influenced targeted/untargeted lipidomic metabolites in hepatoma, including lipid metabolism, glucose metabolism, amino acid metabolism, nucleotide metabolism, and energy metabolism, suggesting that PD-L1 globally modulates the metabolic reprogramming of tumours. Mechanistically, PD-L1 activated epidermal growth factor receptor (EGFR) and/or integrin β4 (ITGB4) by forming a complex of PD-L1/EGFR/ITGB4 in the cell membrane, prior to activating PI3K/mTOR/SREBP1c signalling, leading to reprogramming of lipid metabolism in tumours. Functionally, PD-L1-mediated lipid metabolism reprogramming supported the tumour growth in vitro and in vivo through EGFR and/or ITGB4 in an immune cell-independent manner.
    UNASSIGNED: Our findings on lipogenesis and EGFR activation by tumour cell-expressed PD-L1 suggest that, in addition to its immunostimulatory effects, anti-PD-L1 may restrict lipid metabolism and EGFR/ITGB4 signalling in liver cancer therapy.
    UNASSIGNED: In this study, we present evidence that PD-L1 drives the reprogramming of lipid metabolism in tumours. PD-L1 forms a complex with epidermal growth factor receptor (EGFR) and ITGB4, activating the PI3K/Akt/mTOR/SREBP1c signalling pathway and thereby contributing to lipid metabolism in cancer progression. Our findings offer novel insights into the mechanisms by which PD-L1 initiates the reprogramming of lipid metabolism in tumours. From a clinical perspective, the anti-PD-L1 antibody may alleviate resistance to the anti-EGFR antibody cetuximab and inhibit the reprogramming of lipid metabolism in tumours.
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  • 文章类型: Journal Article
    目的:糖类抗原199(CA199)是标准的肿瘤标志物,最近的研究发现糖尿病患者的CA199水平升高。然而,没有系统的测量和比较糖尿病和癌症患者的血清CA199水平.这里,本研究对2型糖尿病和各种癌症患者血清CA199水平的变化进行了详细描述.
    方法:在过去三年(2020-2023年)中,总共对5,641名参与者进行了血清CA199水平的临床实验室测试结果筛查。这项研究包括2,464名健康对照,688例2型糖尿病患者,和2,489名患者患有16种不同类型的癌症。每种类型的癌症都有30多个独立的血清CA199水平检测结果。比较癌症组之间的血清CA199水平,2型糖尿病患者,和健康的控制。此外,比较了癌症患者与2型糖尿病患者的CA199水平.
    结果:食管癌患者血清CA199水平,肺癌,胰腺癌,卵巢癌,乳腺癌,直肠癌,前列腺癌,膀胱癌,肝癌,胃癌,宫颈癌,结肠癌,淋巴瘤甲状腺癌,颅内肿瘤,与健康对照组相比,鼻咽喉癌升高(P<0.01)。此外,2型糖尿病患者血清CA199水平也明显高于健康对照组(P<0.01)。此外,2型糖尿病患者血清CA199水平的升高程度与某些类型的癌症没有显着差异,如食管癌(P=0.163),乳腺癌(P=0.927),前列腺癌(P=1.000),膀胱癌(P=0.406),淋巴瘤(P=0.975),甲状腺癌(P=1.000),颅内肿瘤(P=0.161),鼻咽癌和喉癌(P=1.000)。
    结论:2型糖尿病患者血清CA199水平也升高,增加的幅度与某些癌症相似。
    OBJECTIVE: Carbohydrate antigen 199 (CA199) is a standard tumor marker, and recent studies have found elevated in CA199 levels in patients with diabetes. However, there is no systematic measurement and comparison of serum CA199 levels in patients with diabetes and cancer. Here, a detailed description of the changes in serum CA199 levels in patients with type 2 diabetes and various cancers was explored.
    METHODS: A total of 5,641 participants were screened for clinical laboratory test results of serum CA199 levels over the past three years (2020-2023). This study included 2,464 healthy controls, 688 patients with type 2 diabetes, and 2,489 patients with 16 different types of cancer. Each type of cancer had more than 30 independent serum CA199 level test results. The serum CA199 levels were compared between cancer groups, type 2 diabetes patients, and healthy controls. Additionally, the CA199 levels of cancer patients were compared with those of patients with type 2 diabetes.
    RESULTS: The serum CA199 levels of esophagus cancer, lung cancer, pancreatic cancer, ovarian cancer, breast cancer, rectum cancer, prostate cancer, bladder cancer, liver cancer, gastric cancer, cervical cancer, colon cancer, lymphoma, thyroid cancer, intracranial tumors, and nasopharyngeal laryngeal cancer were found to be elevated compared to healthy controls (P < 0.01). In addition, the serum CA199 levels of patients with type 2 diabetes were also significantly elevated compared to healthy controls (P < 0.01). Moreover, the degree of elevation in serum CA199 levels in patients with type 2 diabetes was not significantly different from that observed in some types of cancer, such as esophagus cancer (P = 0.163), breast cancer (P = 0.927), prostate cancer (P = 1.000), bladder cancer (P = 0.406), Lymphoma (P = 0.975), thyroid cancer (P = 1.000), intracranial tumors (P = 0.161), nasopharyngeal and laryngeal cancer (P = 1.000).
    CONCLUSIONS: Serum CA199 levels also increase in type 2 diabetes, and the magnitude of the increase is similar to that seen in some cancers.
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  • 文章类型: Journal Article
    肝细胞癌(HCC)仍然是世界范围内的健康问题。越来越多的证据表明,耗尽的T细胞在HCC的进展和治疗中起着至关重要的作用。因此,耗竭T细胞的详细表征及其临床意义值得在HCC中进一步研究。基于GSE146115,我们提出了一个全面的肝癌单细胞图谱。伪时间分析显示肿瘤异质性逐渐增加,耗尽的T细胞在肿瘤进展过程中逐渐出现。功能富集分析表明,耗竭T细胞的进化过程主要包含钙粘蛋白结合途径,蛋白酶体,细胞周期,T细胞受体调控凋亡。在国际癌症基因组联盟数据库中,我们将患者分为具有T细胞进化相关基因的三个簇.通过免疫和存活分析,我们发现耗尽的T细胞与不良结果显着相关。在癌症基因组图谱数据库中,作者加入了加权基因共表达网络分析,单变量Cox分析,还有LassoCox分析,然后筛选了19个核心基因在T细胞进化中的应用,并建立了一个稳健的预后模型。这项研究提供了从耗尽的T细胞角度评估患者预后的新观点,并可能帮助临床医生开发治疗系统。
    Hepatocellular carcinoma (HCC) remains a worldwide health problem. Mounting evidence indicates that exhausted T cells play a critical role in the progress and treatment of HCC. Therefore, a detailed characterisation of exhausted T cells and their clinical significance warrants further investigation in HCC. Based on the GSE146115, we presented a comprehensive single-cell Atlas in HCC. Pseudo-time analysis revealed that tumour heterogeneity progressively increased, and the exhausted T cells gradually appeared during tumour progression. Functional enrichment analysis revealed that the evolutionary process of exhausted T cells mainly contained the pathway of cadherin binding, proteasome, cell cycle, and T cell receptor regulation of apoptosis. In the International Cancer Genome Consortium database, we divided patients into three clusters with the T cell evolution-associated genes. We found that the exhausted T cells are significantly related to poor outcomes through immunity and survival analysis. In The Cancer Genome Atlas database, the authors enrolled weighted gene co-expression network analysis, univariate Cox analysis, and Lasso Cox analysis, then screened the 19 core genes in T cells evolution and built a robust prognostic model. This study offers a fresh view on evaluating the patients\' outcomes from an exhausted T cells perspective and might help clinicians develop therapeutic systems.
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