semisupervised learning

半监督学习
  • 文章类型: Journal Article
    超疏水性的跳跃-液滴凝结和结霜在各种工程应用中具有巨大的潜力,从传热过程到防雾/霜冻技术。然而,由于液滴行为的高频率,监测这样的液滴是具有挑战性的,液滴尺寸的跨尺度分布,和表面形态的多样性。利用深度学习,我们开发了一个半监督框架,监测冷凝和结霜的光学可观察过程。该系统擅长识别瞬态液滴分布和动态活动,例如液滴聚结,跳跃,结霜,在各种超疏水表面上。利用这种瞬态和动态信息,各种物理性质,比如热通量,跳跃的特点,和结霜率,可以进一步量化,感知和全面地输送各表面的传热和抗冻性能。此外,该框架仅依赖于少量的注释数据,并且可以有效地适应具有变化的表面形态和照明技术的新冷凝条件。这种适应性对于优化表面设计以增强冷凝热传递和抗结霜性能是有益的。
    Superhydrophobicity-enabled jumping-droplet condensation and frosting have great potential in various engineering applications, ranging from heat transfer processes to antifog/frost techniques. However, monitoring such droplets is challenging due to the high frequency of droplet behaviors, cross-scale distribution of droplet sizes, and diversity of surface morphologies. Leveraging deep learning, we develop a semisupervised framework that monitors the optical observable process of condensation and frosting. This system is adept at identifying transient droplet distributions and dynamic activities, such as droplet coalescence, jumping, and frosting, on a variety of superhydrophobic surfaces. Utilizing this transient and dynamic information, various physical properties, such as heat flux, jumping characteristics, and frosting rate, can be further quantified, conveying the heat transfer and antifrost performances of each surface perceptually and comprehensively. Furthermore, this framework relies on only a small amount of annotated data and can efficiently adapt to new condensation conditions with varying surface morphologies and illumination techniques. This adaptability is beneficial for optimizing surface designs to enhance condensation heat transfer and antifrosting performance.
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  • 文章类型: Journal Article
    分子预测任务通常需要一系列专业实验来标记目标分子,它遭受了有限的标记数据问题。半监督学习范式之一,被称为自我训练,利用标记和未标记的数据。具体来说,教师模型使用标记数据进行训练,并为未标记数据生成伪标签。然后将这些标记和伪标记的数据联合用于训练学生模型。然而,从教师模型生成的伪标签通常不够准确。因此,我们提出了一种稳健的自我训练策略,通过探索稳健的损失函数来处理两个范式中的这种嘈杂的标签,也就是说,通用和自适应。我们已经对具有四个骨干模型的三个分子生物学预测任务进行了实验,以逐步评估所提出的稳健自我训练策略的性能。结果表明,该方法提高了所有任务的预测性能,特别是在分子回归任务中,平均增幅为41.5%。此外,可视化分析证实了我们方法的优越性。我们提出的健壮自我训练是一种简单而有效的策略,可以有效地提高分子生物学预测性能。它通过利用标记和未标记的数据来解决分子生物学中标记数据不足的问题。此外,它可以很容易地嵌入任何预测任务,它是生物信息学界的通用方法。
    Molecular prediction tasks normally demand a series of professional experiments to label the target molecule, which suffers from the limited labeled data problem. One of the semisupervised learning paradigms, known as self-training, utilizes both labeled and unlabeled data. Specifically, a teacher model is trained using labeled data and produces pseudo labels for unlabeled data. These labeled and pseudo-labeled data are then jointly used to train a student model. However, the pseudo labels generated from the teacher model are generally not sufficiently accurate. Thus, we propose a robust self-training strategy by exploring robust loss function to handle such noisy labels in two paradigms, that is, generic and adaptive. We have conducted experiments on three molecular biology prediction tasks with four backbone models to gradually evaluate the performance of the proposed robust self-training strategy. The results demonstrate that the proposed method enhances prediction performance across all tasks, notably within molecular regression tasks, where there has been an average enhancement of 41.5%. Furthermore, the visualization analysis confirms the superiority of our method. Our proposed robust self-training is a simple yet effective strategy that efficiently improves molecular biology prediction performance. It tackles the labeled data insufficient issue in molecular biology by taking advantage of both labeled and unlabeled data. Moreover, it can be easily embedded with any prediction task, which serves as a universal approach for the bioinformatics community.
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  • 文章类型: Journal Article
    使用正电子发射断层扫描/计算机断层扫描(PET/CT)多模态图像对胰腺癌肿瘤进行准确分割对于临床诊断和预后评估至关重要。然而,用于自动医学图像分割的深度学习方法需要大量的手动标记数据,使其耗时耗力。此外,多模态图像的添加或简单拼接导致冗余信息,未能充分利用多模态图像的互补信息。因此,我们开发了一种半监督多模式网络,该网络利用了有限的标记样本,并引入了交叉融合和互信息最小化(MIM)策略,用于胰腺肿瘤的PET/CT3D分割.
    我们的方法将交叉多模态融合(CMF)模块与交叉注意力机制相结合。将互补的多模态特征融合以形成多特征集,以增强特征提取的有效性,同时保留每个模态图像的特定特征。此外,我们设计了一个MIM模块来减轻冗余的高级模态信息,并计算PET和CT的潜在损失。最后,我们的方法采用不确定性感知均值教师半监督框架,使用少量标记数据和大量未标记数据从PET/CT图像中分割出感兴趣区域.
    我们在胰腺癌的私有数据集上评估了MIM和CMF半监督分割网络(MIM-CMFNet)的组合,平均骰子系数为73.14%,Jaccard指数平均得分为60.56%,平均95%Hausdorff距离(95HD)为6.30mm。此外,为了验证我们方法的广泛适用性,我们使用了头颈癌的公开数据集,平均骰子系数为68.71%,Jaccard指数平均得分为57.72%,和7.88毫米的平均95HD。
    实验结果证明了我们的MIM-CMFNet优于现有的半监督技术。我们的方法可以实现类似于完全监督分割方法的性能,同时显着降低80%的数据注释成本,提示临床应用具有较高的实用性。
    UNASSIGNED: Accurate segmentation of pancreatic cancer tumors using positron emission tomography/computed tomography (PET/CT) multimodal images is crucial for clinical diagnosis and prognosis evaluation. However, deep learning methods for automated medical image segmentation require a substantial amount of manually labeled data, making it time-consuming and labor-intensive. Moreover, addition or simple stitching of multimodal images leads to redundant information, failing to fully exploit the complementary information of multimodal images. Therefore, we developed a semisupervised multimodal network that leverages limited labeled samples and introduces a cross-fusion and mutual information minimization (MIM) strategy for PET/CT 3D segmentation of pancreatic tumors.
    UNASSIGNED: Our approach combined a cross multimodal fusion (CMF) module with a cross-attention mechanism. The complementary multimodal features were fused to form a multifeature set to enhance the effectiveness of feature extraction while preserving specific features of each modal image. In addition, we designed an MIM module to mitigate redundant high-level modal information and compute the latent loss of PET and CT. Finally, our method employed the uncertainty-aware mean teacher semi-supervised framework to segment regions of interest from PET/CT images using a small amount of labeled data and a large amount of unlabeled data.
    UNASSIGNED: We evaluated our combined MIM and CMF semisupervised segmentation network (MIM-CMFNet) on a private dataset of pancreatic cancer, yielding an average Dice coefficient of 73.14%, an average Jaccard index score of 60.56%, and an average 95% Hausdorff distance (95HD) of 6.30 mm. In addition, to verify the broad applicability of our method, we used a public dataset of head and neck cancer, yielding an average Dice coefficient of 68.71%, an average Jaccard index score of 57.72%, and an average 95HD of 7.88 mm.
    UNASSIGNED: The experimental results demonstrate the superiority of our MIM-CMFNet over existing semisupervised techniques. Our approach can achieve a performance similar to that of fully supervised segmentation methods while significantly reducing the data annotation cost by 80%, suggesting it is highly practicable for clinical application.
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  • 文章类型: Journal Article
    在实践中学习分类模型通常需要大量标记数据进行训练。然而,基于实例的注释对于人类执行来说可能是低效的。在这篇文章中,我们提出并研究了一种新型的人工监督,该监督快速执行且对模型学习有用。而不是标记单个实例,人类为数据区域提供监督,它们是输入数据空间的子空间,代表数据的亚群。由于现在标记是在区域级别上执行的,0/1标签变得不精确。因此,我们设计区域标签是对班级比例的定性评估,这粗略地保持了标签的精度,但也很容易为人类做。要确定用于标记和学习的信息区域,我们进一步设计了一个递推构建区域层次结构的分层主动学习过程。这个过程是半监督的,因为它是由主动学习策略和人类专业知识驱动的,人类可以提供辨别特征。为了评估我们的框架,我们对9个数据集进行了广泛的实验,并对结直肠癌患者的生存分析进行了真实的用户研究。结果清楚地表明了我们基于区域的主动学习框架相对于许多基于实例的主动学习方法的优越性。
    Learning classification models in practice usually requires numerous labeled data for training. However, instance-based annotation can be inefficient for humans to perform. In this article, we propose and study a new type of human supervision that is fast to perform and useful for model learning. Instead of labeling individual instances, humans provide supervision to data regions, which are subspaces of the input data space, representing subpopulations of data. Since labeling now is performed on a region level, 0/1 labeling becomes imprecise. Thus, we design the region label to be a qualitative assessment of the class proportion, which coarsely preserves the labeling precision but is also easy for humans to do. To identify informative regions for labeling and learning, we further devise a hierarchical active learning process that recursively constructs a region hierarchy. This process is semisupervised in the sense that it is driven by both active learning strategies and human expertise, where humans can provide discriminative features. To evaluate our framework, we conducted extensive experiments on nine datasets as well as a real user study on a survival analysis of colorectal cancer patients. The results have clearly demonstrated the superiority of our region-based active learning framework against many instance-based active learning methods.
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  • 文章类型: Journal Article
    背景:观察性生物医学研究促进了大规模电子健康记录(EHR)利用的新策略,以支持精准医学。然而,数据标签不可访问性是临床预测中越来越重要的问题,尽管使用了合成和半监督的数据学习。很少有研究旨在揭示EHR的潜在图形结构。
    目的:提出了一种基于网络的生成对抗半监督方法。目的是在标签缺陷EHR上训练临床预测模型,以实现与监督方法相当的学习性能。
    方法:选取来自浙江大学附属第二医院的3个公开数据集和1个大肠癌数据集作为基准。所提出的模型在5%至25%的标记数据上进行了训练,并针对常规的半监督和监督方法对分类指标进行了评估。数据质量,模型安全,和内存可伸缩性也进行了评估。
    结果:在相同的设置下,提出的半监督分类方法优于相关的半监督方法,四个数据集的接收器工作特征曲线(AUC)下的平均面积达到0.945、0.673、0.611和0.588,分别,其次是基于图的半监督学习(分别为0.450、0.454、0.425和0.5676)和标签传播(分别为0.475、0.344、0.440和0.477)。10%标记数据的平均分类AUC分别为0.929、0.719、0.652和0.650,与监督学习方法逻辑回归(分别为0.601、0.670、0.731和0.710)相当,支持向量机(分别为0.733、0.720、0.720和0.721),和随机森林(分别为0.982、0.750、0.758和0.740)。通过现实的数据合成和强大的隐私保护,可以缓解有关数据二次使用和数据安全的担忧。
    结论:在数据驱动的研究中,对标签缺陷型EHR的临床预测模型进行训练是必不可少的。所提出的方法具有利用EHR的内在结构并实现与监督方法相当的学习性能的巨大潜力。
    BACKGROUND: Observational biomedical studies facilitate a new strategy for large-scale electronic health record (EHR) utilization to support precision medicine. However, data label inaccessibility is an increasingly important issue in clinical prediction, despite the use of synthetic and semisupervised learning from data. Little research has aimed to uncover the underlying graphical structure of EHRs.
    OBJECTIVE: A network-based generative adversarial semisupervised method is proposed. The objective is to train clinical prediction models on label-deficient EHRs to achieve comparable learning performance to supervised methods.
    METHODS: Three public data sets and one colorectal cancer data set gathered from the Second Affiliated Hospital of Zhejiang University were selected as benchmarks. The proposed models were trained on 5% to 25% labeled data and evaluated on classification metrics against conventional semisupervised and supervised methods. The data quality, model security, and memory scalability were also evaluated.
    RESULTS: The proposed method for semisupervised classification outperforms related semisupervised methods under the same setup, with the average area under the receiver operating characteristics curve (AUC) reaching 0.945, 0.673, 0.611, and 0.588 for the four data sets, respectively, followed by graph-based semisupervised learning (0.450, 0.454, 0.425, and 0.5676, respectively) and label propagation (0.475,0.344, 0.440, and 0.477, respectively). The average classification AUCs with 10% labeled data were 0.929, 0.719, 0.652, and 0.650, respectively, comparable to that of the supervised learning methods logistic regression (0.601, 0.670, 0.731, and 0.710, respectively), support vector machines (0.733, 0.720, 0.720, and 0.721, respectively), and random forests (0.982, 0.750, 0.758, and 0.740, respectively). The concerns regarding the secondary use of data and data security are alleviated by realistic data synthesis and robust privacy preservation.
    CONCLUSIONS: Training clinical prediction models on label-deficient EHRs is indispensable in data-driven research. The proposed method has great potential to exploit the intrinsic structure of EHRs and achieve comparable learning performance to supervised methods.
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  • 文章类型: Journal Article
    近年来,随着癌症相关研究的逐渐增加,癌症转移领域越来越受到重视。然而,癌症转移的分子机制尚不清楚,和鉴定癌症转移相关基因的方法仍然缺乏。鉴于本文的研究现状,我们开发了一种基于复合约束非负矩阵分解(CCNMF)的新管道来鉴定癌症转移相关基因.为了解决上述问题,设计了以下模块。首先采用校正算子和特征相似性融合(FSF)来处理基因的多组学特征;由不相关的生物分子模式引起的影响,表现为非高斯噪声,被最小化。然后采用CCNMF来处理上述特征,具有由基因关系网络和“转移相关”基因集组成的复合约束,这最大限度地提高了NMF产生的元生物可解释性。由于一组阴性的癌症“转移相关”基因很难获得,我们对管道中每个步骤获得的基因特征进行了半监督分析,以检查我们方法的效果。通过上述方法确定的236个候选物中有83%与一种或多种癌症的转移有关,除了标志基因外,71.9%的候选者在癌症中被鉴定为免疫相关。我们的研究提供了一个有效的和可解释的方法来识别转移相关的以及免疫相关的基因。该方法已成功应用于TCGA癌症数据。
    In recent years, with the gradual increase in pancancer-related research, more attention has been given to the field of pancancer metastasis. However, the molecular mechanism of pancancer metastasis is very unclear, and identification methods for pancancer metastasis-related genes are still lacking. In view of this research status, we developed a novel pipeline to identify pancancer metastasis-related genes based on compound constrained nonnegative matrix factorization (CCNMF). To solve the above problems, the following modules were designed. A correntropy operator and feature similarity fusion (FSF) were first adopted to process the multiomics features of genes; thus, the influences caused by irrelevant biomolecular patterns, manifested as non-Gaussian noise, were minimized. CCNMF was then adopted to handle the above features with compound constraints consisting of a gene relation network and a \"metastasis-related\" gene set, which maximizes the biological interpretability of the metafeatures generated by NMF. Since a negative set of pancancer \"metastasis-related\" genes could hardly be obtained, semisupervised analyses were performed on gene features acquired by each step in our pipeline to examine our method\'s effect. 83% of the 236 candidates identified by the above method were associated with the metastasis of one or more cancers, 71.9% candidates were identified immune-related in pancancer in addition to the hallmark genes. Our study provides an effective and interpretable method for identifying metastasis-related as well as immune-related genes, and the method is successfully applied to TCGA pancancer data.
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  • 文章类型: Journal Article
    轴承的故障会对设备的安全运行产生重大的负面影响。最近,由于其强大的可扩展性和非线性拟合能力,深度学习已成为RUL预测的重点之一。深度学习中的监督学习过程需要大量的标记数据,但是数据标签可能是昂贵且耗时的。Cotraining是一种半监督学习方法,通过利用监督学习中可用的未标记数据来提高准确性,从而减少所需标记数据的数量。本文创新性地提出了一种基于共调的RUL预测方法。CNN和LSTM在大量未标记的数据上进行了合并,以获得健康指标(HI),然后将监测数据输入HI,实现RUL预测。使用PHM2012数据集上的RMSE和MAPE值,对现有文献中的单个CNN和LSTM以及堆叠网络SAE+LSTM和CNN+LSTM进行了比较和分析。结果表明,该方法的RMSE和MAPE值优于单个CNN和LSTM,该方法的RMSE值为54.72,显著低于SAE+LSTM(137.12),接近CNN+LSTM(49.36)。所提出的方法也已在现实世界的任务上成功测试,因此具有很强的应用价值。
    The failure of bearings can have a significant negative impact on the safe operation of equipment. Recently, deep learning has become one of the focuses of RUL prediction due to its potent scalability and nonlinear fitting ability. The supervised learning process in deep learning requires a significant quantity of labeled data, but data labeling can be expensive and time-consuming. Cotraining is a semisupervised learning method that reduces the quantity of required labeled data through exploiting available unlabeled data in supervised learning to boost accuracy. This paper innovatively proposes a cotraining-based approach for RUL prediction. A CNN and an LSTM were cotrained on large amounts of unlabeled data to obtain a health indicator (HI), then the monitoring data were entered into the HI and the RUL prediction was realized. The effectiveness of the proposed approach was compared and analyzed against individual CNN and LSTM and the stacking networks SAE+LSTM and CNN+LSTM in the existing literature using RMSE and MAPE values on a PHM 2012 dataset. The results demonstrate that the RMSE and MAPE value of the proposed approach are superior to individual CNN and LSTM, and the RMSE value of the proposed approach is 54.72, which is significantly lower than SAE+LSTM (137.12), and close to CNN+LSTM (49.36). The proposed approach has also been tested successfully on a real-world task and thus has strong application value.
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  • 文章类型: Journal Article
    This study proposed a semisupervised loss function named level-set loss (LSLoss) for cerebral white matter hyperintensities (WMHs) segmentation on fluid-attenuated inversion recovery images. The training procedure did not require manually labeled WMH masks. Our image preprocessing steps included biased field correction, skull stripping, and white matter segmentation. With the proposed LSLoss, we trained a V-Net using the MRI images from both local and public databases. Local databases were the small vessel disease cohort (HKU-SVD, n = 360) and the multiple sclerosis cohort (HKU-MS, n = 20) from our institutional imaging center. Public databases were the Medical Image Computing Computer-assisted Intervention (MICCAI) WMH challenge database (MICCAI-WMH, n = 60) and the normal control cohort of the Alzheimer\'s Disease Neuroimaging Initiative database (ADNI-CN, n = 15). We achieved an overall dice similarity coefficient (DSC) of 0.81 on the HKU-SVD testing set (n = 20), DSC = 0.77 on the HKU-MS testing set (n = 5), and DSC = 0.78 on MICCAI-WMH testing set (n = 30). The segmentation results obtained by our semisupervised V-Net were comparable with the supervised methods and outperformed the unsupervised methods in the literature.
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  • 文章类型: Journal Article
    背景:半监督策略已被用于缓解由于在收集大量注释分割掩码方面的挑战而导致的分割应用问题,这是训练高性能3D卷积神经网络(CNN)的基本前提。
    目的:现有的半监督分割方法主要关注如何生成正则化的伪标签,但没有明确评估伪标签的质量。为了缓解这个问题,我们为半监督体积医学图像分割提供了一种简单而有效的互惠学习策略,,为未注释的数据生成更可靠的伪标签。
    方法:我们提出的互惠学习是通过一对网络实现的,一个作为教师网络,另一个作为学生网络。学生网络从教师网络生成的伪标签中学习。此外,教师网络根据学生在注释图像上的表现的相互反馈信号自主优化其参数。在三个医学图像数据集上评估了该方法的有效性,包括82个胰腺计算机断层扫描(CT)扫描(训练/测试:62/20),100次左心房钆增强磁共振(MR)扫描(训练/测试:80/20),和200乳腺癌MR扫描(训练/测试:68/132)。比较方法包括平均教师(MT)模型,不确定性感知MT(UA-MT)模型,形状感知对抗网络(SASSNet),和变换一致的自集成模型(TCSM)。评价指标是骰子相似系数(Dice),Jaccard指数(Jaccard),95%Hausdorff距离(95HD),和平均表面距离(ASD)。使用Wilcoxon符号秩检验进行统计分析。
    结果:利用20%的标记数据和80%的未标记数据进行训练,我们提出的方法平均骰子为84.77%/90.46%/78.53%,Jaccard占73.71%/82.67%/69.00%,胰腺/左心房/乳腺数据集的ASD为1.58/1.90/0.57,95HD为6.24/5.97/4.34,分别。这些结果优于几种尖端的半监督方法,展示了我们的方法在具有挑战性的半监督分割应用中的可行性。
    结论:提出的互惠学习策略是一种通用的半监督解决方案,并且有可能应用于其他3D分割任务。
    BACKGROUND: Semisupervised strategy has been utilized to alleviate issues from segmentation applications due to challenges in collecting abundant annotated segmentation masks, which is an essential prerequisite for training high-performance 3D convolutional neural networks (CNNs) .
    OBJECTIVE: Existing semisupervised segmentation methods are mainly concerned with how to generate the pseudo labels with regularization but not evaluate the quality of the pseudo labels explicitly. To alleviate this problem, we offer a simple yet effective reciprocal learning strategy for semisupervised volumetric medical image segmentation, which generates more reliable pseudo labels for the unannotated data.
    METHODS: Our proposed reciprocal learning is achieved through a pair of networks, one as a teacher network and the other as a student network. The student network learns from pseudo labels generated by the teacher network. In addition, the teacher network autonomously optimizes its parameters based on the reciprocal feedback signals from the student\'s performance on the annotated images. The efficacy of the proposed method is evaluated on three medical image data sets, including 82 pancreas computed tomography (CT) scans (training/testing: 62/20), 100 left atrium gadolinium-enhanced magnetic resonance (MR) scans (training/testing: 80/20), and 200 breast cancer MR scans (training/testing: 68/132). The comparison methods include mean teacher (MT) model, uncertainty-aware MT (UA-MT) model, shape-aware adversarial network (SASSNet), and transformation-consistent self-ensembling model (TCSM). The evaluation metrics are Dice similarity coefficient (Dice), Jaccard index (Jaccard), 95% Hausdorff distance (95HD), and average surface distance (ASD). The Wilcoxon signed-rank test is used to conduct the statistical analyses.
    RESULTS: By utilizing 20% labeled data and 80% unlabeled data for training, our proposed method achieves an average Dice of 84.77%/90.46%/78.53%, Jaccard of 73.71%/82.67%/69.00%, ASD of 1.58/1.90/0.57, and 95HD of 6.24/5.97/4.34 on pancreas/left atrium/breast data sets, respectively. These results outperform several cutting-edge semisupervised approaches, showing the feasibility of our method for the challenging semisupervised segmentation applications.
    CONCLUSIONS: The proposed reciprocal learning strategy is a general semisupervised solution and has the potential to be applied for other 3D segmentation tasks.
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  • 文章类型: Journal Article
    背景:图像配准长期以来一直是医学图像计算社会中的活跃研究领域,即在一对图像之间进行空间变换,并建立逐点对应关系,以实现空间一致性。
    目标:以前的工作主要集中在通过最大化全局水平来学习复杂的变形场(即,前景加背景)图像相似性。我们认为,考虑背景相似性可能不是一个好的解决方案,如果我们只在实际临床实践中寻求靶器官/区域的准确对齐。
    方法:我们,因此,提出了一个新的Salient$显著$Reistration$注册$的概念,并介绍了一个配有显著模块的新型可变形网络。具体来说,提出了基于多任务学习的显著性模块,以半监督的方式区分显著的注册区域。然后,我们的可变形网络分析了显著区域的强度和解剖相似性,最后进行显著的可变形配准。
    结果:我们评估了所提出的网络在具有挑战性的腹部多器官CT扫描中的功效。实验结果表明,所提出的注册网络优于其他最先进的方法,达到40.2%的平均骰子相似系数(DSC),Hausdorff距离(95HD)为20.8mm,平均对称表面距离(ASSD)为4.58mm。此外,即使通过使用一个标记数据进行训练,我们的网络仍然可以达到令人满意的注册性能,平均DSC为39.2%,95高清21.2毫米,和4.78毫米的ASSD。
    结论:提出的网络为多器官注册提供了准确的解决方案,并有可能用于改进其他注册应用。该代码可在https://github.com/Rrrfrr/Salient-Deformable-Network上公开获得。
    BACKGROUND: Image registration has long been an active research area in the society of medical image computing, which is to perform spatial transformation between a pair of images and establish a point-wise correspondence to achieve spatial consistency.
    OBJECTIVE: Previous work mainly focused on learning complicated deformation fields by maximizing the global-level (i.e., foreground plus background) image similarity. We argue that taking the background similarity into account may not be a good solution, if we only seek the accurate alignment of target organs/regions in real clinical practice.
    METHODS: We, therefore, propose a novel concept of S a l i e n t $Salient$ R e g i s t r a t i o n $Registration$ and introduce a novel deformable network equipped with a saliency module. Specifically, a multitask learning-based saliency module is proposed to discriminate the salient regions-of-registration in a semisupervised manner. Then, our deformable network analyzes the intensity and anatomical similarity of salient regions, and finally conducts the salient deformable registration.
    RESULTS: We evaluate the efficacy of the proposed network on challenging abdominal multiorgan CT scans. The experimental results demonstrate that the proposed registration network outperforms other state-of-the-art methods, achieving a mean Dice similarity coefficient (DSC) of 40.2%, Hausdorff distance (95 HD) of 20.8 mm, and average symmetric surface distance (ASSD) of 4.58 mm. Moreover, even by training using one labeled data, our network can still attain satisfactory registration performance, with a mean DSC of 39.2%, 95 HD of 21.2 mm, and ASSD of 4.78 mm.
    CONCLUSIONS: The proposed network provides an accurate solution for multiorgan registration and has the potential to be used for improving other registration applications. The code is publicly available at https://github.com/Rrrfrr/Salient-Deformable-Network.
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