mtDNA

mtDNA
  • 文章类型: Journal Article
    脓毒症诱导的急性肺损伤与肺上皮细胞损伤有关。这项研究分析了抗菌肽LL37与线粒体DNA(LL37-mtDNA)的作用及其在脂多糖(LPS)处理的大鼠II型肺泡上皮细胞(RLE-6TN细胞)中的潜在作用机制。用LPS单独或LL37-mtDNA处理RLE-6TN细胞,其次是转录组测序。使用生物信息学工具筛选差异表达和关键基因。LL37-mtDNA对细胞活力的影响,炎症,凋亡,活性氧(ROS)的产生,在LPS处理的RLE-6TN细胞中评估自噬相关标志的表达。此外,在体外研究了LL37-mtDNA处理后Hsp90aa1沉默的作用。LL37-mtDNA进一步抑制细胞活力,细胞凋亡增强,促进炎症细胞因子的释放,增加ROS产量,和在LPS处理的RLE-6TN细胞中LC3B表达升高。使用转录组测序和生物信息学,确定了十个候选基因,其中3个核心基因在LPS+LL37-mtDNA组中被证实上调。此外,Hsp90aa1下调减弱了LL37-mtDNA对LPS处理的RLE-6TN细胞的影响。Hsp90aa1沉默可能是抵消LL37-mtDNA对生存力影响的关键目标,凋亡,炎症,LPS处理的RLE-6TN细胞中的自噬激活。
    Sepsis-induced acute lung injury is associated with lung epithelial cell injury. This study analyzed the role of the antimicrobial peptide LL37 with mitochondrial DNA (LL37-mtDNA) and its potential mechanism of action in lipopolysaccharide (LPS)-treated rat type II alveolar epithelial cells (RLE-6TN cells). RLE-6TN cells were treated with LPS alone or with LL37-mtDNA, followed by transcriptome sequencing. Differentially expressed and pivotal genes were screened using bioinformatics tools. The effects of LL37-mtDNA on cell viability, inflammation, apoptosis, reactive oxygen species (ROS) production, and autophagy-related hallmark expression were evaluated in LPS-treated RLE-6TN cells. Additionally, the effects of Hsp90aa1 silencing following LL37-mtDNA treatment were investigated in vitro. LL37-mtDNA further suppressed cell viability, augmented apoptosis, promoted the release of inflammatory cytokines, increased ROS production, and elevated LC3B expression in LPS-treated RLE-6TN cells. Using transcriptome sequencing and bioinformatics, ten candidate genes were identified, of which three core genes were verified to be upregulated in the LPS + LL37-mtDNA group. Additionally, Hsp90aa1 downregulation attenuated the effects of LL37-mtDNA on LPS-treated RLE-6TN cells. Hsp90aa1 silencing possibly acted as a crucial target to counteract the effects of LL37-mtDNA on viability, apoptosis, inflammation, and autophagy activation in LPS-treated RLE-6TN cells.
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  • 文章类型: Journal Article
    背景:围手术期的肝脏手术通常会导致严重的并发症,称为肝脏缺血再灌注(I/R)损伤。肝I/R损伤与先天免疫应答有关。cGAS-STING途径通过检测细胞内的DNA来触发先天免疫的激活。然而,cGAS-STING通路在肝I/R损伤中的确切机制和意义尚待研究。
    方法:在C57BL/6WT小鼠和STING敲除(STING-KO)小鼠中使用肝I/R损伤的小鼠模型。此外,纯化的原代肝细胞用于构建氧糖剥夺再灌注(OGD-Rep)治疗模型。
    结果:我们的研究表明,在I/R损伤期间,肝脏中cGAS和STING的mRNA和蛋白水平显著增加。有趣的是,缺乏STING通过抑制肝酶的升高对肝I/R损伤具有保护作用,肝细胞死亡,和炎症。此外,药理学cGAS和STING抑制概括了这些现象。巨噬细胞在肝I/R损伤期间cGAS-STING途径的激活中起关键作用。cGAS-STING途径的活性显著降低,并且在巨噬细胞消除后,肝I/R损伤大大减弱。重要的是,我们证明cGAS-STING途径的激活主要是由线粒体DNA(mtDNA)而不是核DNA(nDNA)的释放引起的。此外,保护肝脏免受I/R损伤也归因于通过利用靶向mPTP和VDAC寡聚化的抑制剂阻碍mtDNA释放。
    结论:我们的研究结果表明,mtDNA的释放在I/R损伤过程中通过激活cGAS-STING途径引起肝脏损伤中起重要作用。此外,抑制mtDNA的释放可以为肝脏I/R损伤提供有效的保护。
    BACKGROUND: Liver surgery during the perioperative period often leads to a significant complication known as hepatic ischemia-reperfusion (I/R) injury. Hepatic I/R injury is linked to the innate immune response. The cGAS-STING pathway triggers the activation of innate immune through the detection of DNA within cells. Nevertheless, the precise mechanism and significance of the cGAS-STING pathway in hepatic I/R injury are yet to be investigated.
    METHODS: Mouse model of hepatic I/R injury was used in the C57BL/6 WT mice and the STING knockout (STING-KO) mice. In addition, purified primary hepatocytes were used to construct oxygen-glucose deprivation reperfusion (OGD-Rep) treatment models.
    RESULTS: Our research revealed a notable increase in mRNA and protein levels of cGAS and STING in liver during I/R injury. Interestingly, the lack of STING exhibited a safeguarding impact on hepatic I/R injury by suppressing the elevation of liver enzymes, liver cell death, and inflammation. Furthermore, pharmacological cGAS and STING inhibition recapitulated these phenomena. Macrophages play a crucial role in the activation of the cGAS-STING pathway during hepatic I/R injury. The cGAS-STING pathway experiences a significant decrease in activity and hepatic I/R injury is greatly diminished following the elimination of macrophages. Significantly, we demonstrate that the activation of the cGAS-STING pathway is primarily caused by the liberation of mitochondrial DNA (mtDNA) rather than nuclear DNA (nDNA). Moreover, the safeguarding of the liver against I/R injury is also attributed to the hindrance of mtDNA release through the utilization of inhibitors targeting mPTP and VDAC oligomerization.
    CONCLUSIONS: The results of our study suggest that the release of mtDNA plays a significant role in causing damage to liver by activating the cGAS-STING pathway during I/R injury. Furthermore, inhibiting the release of mtDNA can provide effective protection against hepatic I/R injury.
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  • 文章类型: Journal Article
    肝细胞癌(HCC)是肝癌的最常见形式,预后不良。用于晚期HCC的可用药物是有限的,并且仍然迫切需要实质性的治疗进展,包括新药和新的联合疗法。在这项研究中,我们发现罗伊氏乳杆菌的主要代谢产物(L.reuteri),罗伊林显示出巨大的抗HCC潜力,可以帮助索拉非尼治疗。罗伊林治疗会损害线粒体自噬,并导致线粒体核苷酸的异常聚集,从而阻断线粒体DNA(mtDNA)复制和线粒体裂变,可以促进肝癌细胞mtDNA的泄漏和随后的STING激活。STING可以激活焦亡和坏死性凋亡,而reuterin处理还诱导caspase8表达,通过裂解RIPK3抑制HCC细胞的坏死。因此,焦亡是reuterin处理的HCC细胞的主要死亡形式,STING抑制显着挽救了reuterin的生长抑制作用,同时敲低caspase8协同抑制了焦亡的诱导。总之,我们的研究解释了罗伊特林抗肿瘤作用的详细分子机制,并揭示了其作为HCC治疗组合药物的潜力.
    Hepatocellular carcinoma (HCC) is the most common form of liver cancer with poor prognosis. The available drugs for advanced HCC are limited and substantial therapeutic advances including new drugs and new combination therapies are still in urgent need. In this study, we found that the major metabolite of Lactobacillus reuteri (L. reuteri), reuterin showed great anti-HCC potential and could help in sorafenib treatment. Reuterin treatment impaired mitophagy and caused the aberrant clustering of mitochondrial nucleoids to block mitochondrial DNA (mtDNA) replication and mitochondrial fission, which could promote mtDNA leakage and subsequent STING activation in HCC cells. STING could activate pyroptosis and necroptosis, while reuterin treatment also induced caspase 8 expression to inhibit necroptosis through cleaving RIPK3 in HCC cells. Thus, pyroptosis was the main death form in reuterin-treated HCC cells and STING suppression remarkably rescued the growth inhibitory effect of reuterin and concurrently knockdown caspase 8 synergized to restrain the induction of pyroptosis. In conclusion, our study explains the detailed molecular mechanisms of the antitumor effect of reuterin and reveals its potential to perform as a combinational drug for HCC treatment.
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  • 文章类型: Journal Article
    孕妇外周血线粒体DNA与不良妊娠结局的关系,特别是早产(PTB),仍然不确定。探讨孕前线粒体DNA拷贝数(mtDNAcn)对产前空气污染物暴露与PTB风险之间关系的影响。共招募了来自河南省六个地区的1871名准妈妈。有关空气污染物的信息是从151个环境监测地点获得的,使用实时PCR分析评估相对mtDNAcn。在调整潜在的混杂变量后,确定PTB的风险随着可吸入颗粒物(PM10)水平的升高而增加,细颗粒物(PM2.5),二氧化硫(SO2),在整个怀孕期间,一氧化碳(CO)和臭氧(O3)暴露(P<0.05),但随着二氧化氮(NO2)暴露的增加而降低(0.050.88)的母亲中,NO2暴露量升高时,观察到PTB风险降低.相互作用分析表明,暴露于PM10,PM2.5,SO2,NO2和CO与mtDNAcn相互作用,分别,影响PTB风险(P交互作用<0.05)。这些发现表明,PTB风险与产前空气污染物暴露之间存在值得注意的关联,受到前概念mtDNAcn的影响。
    The relationship between maternal peripheral blood mitochondrial DNA and adverse pregnancy outcomes, specifically preterm birth (PTB), remains uncertain. To investigate the effects of preconception mitochondrial DNA copy number (mtDNAcn) on the association between prenatal air pollutants exposure and PTB risk, a total of 1871 expectant mothers from six regions in Henan Province were recruited. Information regarding air pollutants was obtained from 151 environmental monitoring sites, and relative mtDNAcn was evaluated using real-time PCR analysis. After adjusting for potential confounding variables, it was determined that the risk of PTB increased with elevated levels of inhalable particulate matter (PM10), fine particulate matter (PM2.5), sulfur dioxide (SO2), carbon monoxide (CO) and ozone (O3) exposure (P < 0.05) but decreased with higher nitrogen dioxide (NO2) exposure (0.05 < P < 0.10) during the entire pregnancy. Additionally, the preconception relative mtDNAcn was lower in the PTB group (0.82 ± 0.23) compared to the term group (0.92 ± 0.29). Furthermore, for each 0.1-unit increase in preconception mtDNAcn, the risk of PTB decreased by 14.8%. Stratified analyses revealed that the risk of PTB rose with increasing O3 concentrations, regardless of the relative mtDNAcn. Moreover, the study found a significant association between PTB risk and prenatal exposure to elevated PM10, PM2.5, SO2, and CO, particularly in mothers with low mtDNAcn (≤0.88) (P < 0.05). Conversely, a decrease in the PTB risk was observed with elevated NO2 exposure in mothers with high mtDNAcn (>0.88). Interaction analysis revealed that exposure to PM10, PM2.5, SO2, NO2, and CO interacted with mtDNAcn, respectively, affecting PTB risk (P-interaction<0.05). These findings indicate a noteworthy association between PTB risk and prenatal air pollutants exposure, which is influenced by the preconception mtDNAcn.
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  • 文章类型: Journal Article
    原理:溃疡性结肠炎(UC)的治疗提出了持续的临床挑战。新兴研究暗示cGAS-STING途径促进UC的进展,但是矛盾的结果阻碍了STING作为治疗靶标的发展。在目前的研究中,我们旨在全面阐明其起源,髓样STING在结肠炎和结肠炎相关癌(CAC)中的下游信号传导和致病作用。方法:构建Tmem173fl/flLyz2-Creert2小鼠,用于诱导骨髓特异性缺失STING。RNA测序,流式细胞术,和多重免疫组织化学用于研究DSS诱导的结肠炎或AOM/DSS诱导的癌变中的免疫反应。结肠类器官,原代骨髓源性巨噬细胞和树突状细胞,和脾T细胞用于体外研究。结果:我们观察到成年小鼠的髓样STING敲除抑制巨噬细胞成熟,减少DC细胞激活,并抑制促炎Th1和Th17细胞,从而防止急性和慢性结肠炎和CAC。然而,新生小鼠或肿瘤小鼠的髓样STING缺失表现出受损的免疫耐受和抗肿瘤免疫力。此外,我们发现从受损的结肠类器官释放的TFAM相关mtDNA,而不是细菌产品,以细胞外囊泡非依赖性但内吞依赖性方式激活树突状细胞中的STING。IRF3和NF-κB都是STING介导的IL-12家族细胞因子表达所必需的,促进Th1和Th17分化,并有助于结肠炎的过度炎症。结论:通过髓样STING检测受损肠上皮的TFAM-mtDNA复合物可通过IL-12细胞因子加重结肠炎,提供新的证据支持STING作为UC和CAC的治疗靶点的发展。
    Rationale: The treatment of ulcerative colitis (UC) presents an ongoing clinical challenge. Emerging research has implicated that the cGAS-STING pathway promotes the progression of UC, but conflicting results have hindered the development of STING as a therapeutic target. In the current study, we aim to comprehensively elucidate the origins, downstream signaling and pathogenic roles of myeloid STING in colitis and colitis-associated carcinoma (CAC). Methods: Tmem173 fl/fl Lyz2-Cre ert2 mice were constructed for inducible myeloid-specific deletion of STING. RNA-sequencing, flow cytometry, and multiplex immunohistochemistry were employed to investigate immune responses in DSS-induced colitis or AOM/DSS-induced carcinogenesis. Colonic organoids, primary bone marrow derived macrophages and dendritic cells, and splenic T cells were used for in vitro studies. Results: We observed that myeloid STING knockout in adult mice inhibited macrophage maturation, reduced DC cell activation, and suppressed pro-inflammatory Th1 and Th17 cells, thereby protecting against both acute and chronic colitis and CAC. However, myeloid STING deletion in neonatal or tumor-present mice exhibited impaired immune tolerance and anti-tumor immunity. Furthermore, we found that TFAM-associated mtDNA released from damaged colonic organoids, rather than bacterial products, activates STING in dendritic cells in an extracellular vesicle-independent yet endocytosis-dependent manner. Both IRF3 and NF-κB are required for STING-mediated expression of IL-12 family cytokines, promoting Th1 and Th17 differentiation and contributing to excessive inflammation in colitis. Conclusions: Detection of the TFAM-mtDNA complex from damaged intestinal epithelium by myeloid STING exacerbates colitis through IL-12 cytokines, providing new evidence to support the development of STING as a therapeutic target for UC and CAC.
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  • 文章类型: Journal Article
    线粒体的主要功能是产生能量和参与细胞凋亡,它们在真核生物中高度保守。然而,线粒体基因组的组成,线粒体DNA(mtDNA)复制,线粒体遗传在动物之间差异很大,植物,和真菌。特别是在真菌中,线粒体基因组存在丰富的多样性,以及各种复制和继承机制。因此,对真菌线粒体的全面了解对于揭示真核生物线粒体的进化史至关重要。在这次审查中,我们已经组织了现有的报道,从三个角度系统地描述和总结了酵母样真菌线粒体基因组的组成:线粒体基因组结构,编码基因,和移动元素。我们还提供了双性交配过程中mtDNA复制和线粒体遗传机制的系统概述。此外,我们已经讨论并提出了需要进一步调查以澄清的悬而未决的问题。
    The primary functions of mitochondria are to produce energy and participate in the apoptosis of cells, with them being highly conserved among eukaryotes. However, the composition of mitochondrial genomes, mitochondrial DNA (mtDNA) replication, and mitochondrial inheritance varies significantly among animals, plants, and fungi. Especially in fungi, there exists a rich diversity of mitochondrial genomes, as well as various replication and inheritance mechanisms. Therefore, a comprehensive understanding of fungal mitochondria is crucial for unraveling the evolutionary history of mitochondria in eukaryotes. In this review, we have organized existing reports to systematically describe and summarize the composition of yeast-like fungal mitochondrial genomes from three perspectives: mitochondrial genome structure, encoded genes, and mobile elements. We have also provided a systematic overview of the mechanisms in mtDNA replication and mitochondrial inheritance during bisexual mating. Additionally, we have discussed and proposed open questions that require further investigation for clarification.
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  • 文章类型: Journal Article
    衰老相关分泌表型(SASP)在衰老相关疾病的发展中的作用是显著的,它的控制有望对健康产生巨大的积极影响。最近的一项研究发现了一种新的SASP调控机制,标题为miMOMP。不规范SASP将大大增加各种与年龄相关的健康问题的风险。尽管如此,我们还没有完全理解如何调制SASP。在这篇评论中,我们总结了miMOMP调控SASP的具体机制,并概述了未来可能的研究方向。此外,还提出了miMOMP临床翻译的潜在风险和障碍。
    The role of the senescence-associated secretory phenotype (SASP) in the development of age-related diseases is significant, and its control promises to have a tremendous positive impact on health. A recent study has identified a new mechanism for SASP regulation, titled miMOMP. Failure to regulate SASP would dramatically increase the risk of various age-related health problems. Nonetheless, we have not completely comprehended how to modulate SASP. In this commentary, we summarise the specific mechanisms by which miMOMP regulates SASP and outline possible future research directions. Moreover, potential risks and obstacles to the clinical translation of miMOMP are also presented.
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  • 文章类型: Journal Article
    背景:Z-DNA结合蛋白1(ZBP1)是一种核酸传感器,与多种炎症性疾病有关,但它是否以及如何导致骨关节炎(OA)尚不清楚。
    方法:从患有OA的患者和OA的小鼠模型中收获软骨组织以评价ZBP1表达。随后,研究了ZBP1在原代软骨细胞中的功能作用和机制,并在小鼠模型中探讨了ZBP1在OA中的作用。
    结果:我们发现在内侧半月板(DMM)手术失稳后,来自OA患者和患有OA的小鼠的关节软骨中ZBP1的上调。具体来说,ZBP1敲除减轻软骨细胞损伤并保护小鼠免受DMM诱导的OA。机械上,肿瘤坏死因子α以干扰素调节因子1(IRF1)依赖性方式诱导ZBP1过表达,并通过线粒体DNA(mtDNA)释放和ZBP1结合引起ZBP1的激活。上调和活化的ZBP1可与受体相互作用蛋白激酶1相互作用,激活转化生长因子β活化激酶1-NF-κB信号通路,导致软骨细胞炎症和细胞外基质降解。此外,用环孢素A抑制mtDNA-IRF1-ZBP1轴,mtDNA释放的阻断剂,可以延缓DMM诱导的OA的进展。
    结论:我们的数据揭示了mtDNA-IRF1-ZBP1轴在OA软骨细胞中的病理作用,这表明抑制该轴可能是治疗OA的可行方法。
    BACKGROUND: Z-DNA binding protein 1 (ZBP1) is a nucleic acid sensor that is involved in multiple inflammatory diseases, but whether and how it contributes to osteoarthritis (OA) are unclear.
    METHODS: Cartilage tissues were harvested from patients with OA and a murine model of OA to evaluate ZBP1 expression. Subsequently, the functional role and mechanism of ZBP1 were examined in primary chondrocytes, and the role of ZBP1 in OA was explored in mouse models.
    RESULTS: We showed the upregulation of ZBP1 in articular cartilage originating from OA patients and mice with OA after destabilization of the medial meniscus (DMM) surgery. Specifically, knockdown of ZBP1 alleviated chondrocyte damage and protected mice from DMM-induced OA. Mechanistically, tumor necrosis factor alpha induced ZBP1 overexpression in an interferon regulatory factor 1 (IRF1)-dependent manner and elicited the activation of ZBP1 via mitochondrial DNA (mtDNA) release and ZBP1 binding. The upregulated and activated ZBP1 could interact with receptor-interacting protein kinase 1 and activate the transforming growth factor-beta-activated kinase 1-NF-κB signaling pathway, which led to chondrocyte inflammation and extracellular matrix degradation. Moreover, inhibition of the mtDNA-IRF1-ZBP1 axis with Cyclosporine A, a blocker of mtDNA release, could delay the progression of DMM-induced OA.
    CONCLUSIONS: Our data revealed the pathological role of the mtDNA-IRF1-ZBP1 axis in OA chondrocytes, suggesting that inhibition of this axis could be a viable therapeutic approach for OA.
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  • 文章类型: Editorial
    暂无摘要。
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  • 文章类型: Journal Article
    研究遗传多样性的模式对于濒危物种的保护规划至关重要,尽管在潜在的长期人口变化的背景下推断最近人为栖息地改变的潜在过程仍然具有挑战性。全球濒临灭绝的鳞状白沙(SSME),羊百虫,是东北亚狭窄地区特有的,其种群最近被收缩到两个主要的繁殖区。尽管俄罗斯人口中存在低遗传多样性,这些个体的遗传状况和人口统计学史尚未完全阐明.因此,我们研究了SSME育种种群的遗传多样性和结构,并研究了历史和近期人口变化对当今遗传多样性模式的相对重要性。使用10个核微卫星(SSR)标记和线粒体DNA(mtDNA)控制区序列,我们发现了有限的女性遗传遗传多样性和高水平的核遗传多样性。此外,对这两个标记的分析一致显示,育种种群之间存在明显但弱的差异。根据mtDNA和基于SSR的瓶颈分析结果计算出的不一致的人口统计学历史参数表明,稳定的历史有效人口规模。通过应用近似贝叶斯计算,据估计,由于最近一次由人为效应引起的碎片化事件,而不是在最后一次冰川最大期(LGM)和LGM后重新定殖期间隔离,种群开始在基因上产生差异.这些结果表明,有限的历史种群规模和浅层的进化史可能是导致育种SSME种群当代遗传多样性模式的潜在因素。保护工作应侧重于保护当前的繁殖栖息地免受进一步破坏,优先考虑俄罗斯和中国人口,以及恢复连接的合适的繁殖地。
    Examining patterns of genetic diversity are crucial for conservation planning on endangered species, while inferring the underlying process of recent anthropogenic habitat modifications in the context potential long-term demographic changes remains challenging. The globally endangered scaly-sided merganser (SSME), Mergus squamatus, is endemic to a narrow range in Northeast Asia, and its population has recently been contracted into two main breeding areas. Although low genetic diversity has been suggested in the Russian population, the genetic status and demographic history of these individuals have not been fully elucidated. We therefore examined the genetic diversity and structure of the breeding populations of the SSME and investigated the relative importance of historical and recent demographic changes to the present-day pattern of genetic diversity. Using 10 nuclear microsatellite (SSR) markers and mitochondrial DNA (mtDNA) control region sequences, we found limited female-inherited genetic diversity and a high level of nuclear genetic diversity. In addition, analysis of both markers consistently revealed significant but weak divergence between the breeding populations. Inconsistent demographic history parameters calculated from mtDNA and bottleneck analysis results based on SSR suggested a stable historical effective population size. By applying approximate Bayesian computation, it was estimated that populations started to genetically diverge from each other due to recent fragmentation events caused by anthropogenic effects rather than isolation during Last Glacial Maximum (LGM) and post-LGM recolonization. These results suggest that limited historical population size and shallow evolutionary history may be potential factors contributing to the contemporary genetic diversity pattern of breeding SSME populations. Conservation efforts should focus on protecting the current breeding habitats from further destruction, with priority given to both the Russian and Chinese population, as well as restoring the connected suitable breeding grounds.
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