Lung cancer (LC) continues to be a leading death cause in China, primarily due to late diagnosis. This study aimed to evaluate the effectiveness of using plasma-based near-infrared spectroscopy (NIRS) for LC early diagnosis. A total of 171 plasma samples were collected, including 73 healthy controls (HC), 73 LC, and 25 benign lung tumors (B). NIRS was utilized to measure the spectra of samples. Pre-processing methods, including centering and scaling, standard normal variate, multiplicative scatter correction, Savitzky-Golay smoothing, Savitzky-Golay first derivative, and baseline correction were applied. Subsequently, 4 machine learning (ML) algorithms, including partial least squares (PLS), support vector machines (SVM), gradient boosting machine, and random forest, were utilized to develop diagnostic models using train set data. Then, the predictive performance of each model was evaluated using test set samples. The study was conducted in 5 comparisons as follows: LC and HC, LC and B, B and HC, the diseased group (D) and HC, as well as LC, B and HC. Among the 5 comparisons, SVM consistently generated the best performance with a certain pre-processing method, achieving overall accuracy of 1.0 (kappa: 1.0) in the comparisons of LC and HC, B and HC, as well as D and HC. Pre-processing was identified as a crucial step in developing ML models. Interestingly, PLS demonstrated remarkable stability and relatively high predictive performance across the 5 comparisons, even though it did not achieve the top results like SVM. However, none of these algorithms were able to effectively distinguish B from LC. These findings indicate that the combination of plasma-based NIRS with ML algorithms is a rapid, non-invasive, effective, and economical method for LC early diagnosis.

In this study, in order to realize the sharing of the near-infrared analysis model of holocellulose between three spectral instruments of the same type, 84 pulp samples and their content of holocellulose were taken as the research objects. The effects of 10 pre-processing methods, such as 1st derivative (D1st), 2nd derivative (D2nd), multiplicative scatter correction (MSC), standard normal variable transformation (SNV), autoscaling, normalization, mean centering and pairwise combination, on the transfer effect of the stable wavelength selected by screening wavelengths with consistent and stable signals (SWCSS) were discussed. The results showed that the model established by the wavelength selected by the SWCSS algorithm after the autoscaling pre-processing method had the best analysis effect on the two target samples. Root mean square error of prediction (RMSEP) decreased from 2.4769 and 2.3119 before the model transfer to 1.2563 and 1.2384, respectively. Compared with the full-spectrum model, the value of AIC decreased from 3209.83 to 942.82. Therefore, the autoscaling pre-processing method combined with SWCSS algorithm can significantly improve the accuracy and efficiency of model transfer and provide help for the application of SWCSS algorithm in the rapid determination of pulp properties by near-infrared spectroscopy (NIRS).

BACKGROUND: Variations in plasma properties among spectra and samples lead to significant signal uncertainty and matrix effects in laser-induced breakdown spectroscopy (LIBS). To address this issue, direct compensation for plasma property variations is considered highly desirable. However, reliably compensating for the total number density variation is challenging due to inaccurate spectroscopic parameters. For reliable compensation, a total number density compensation (TNDC) method was presented in our recent work, but its applicability is limited to simple samples because of its strict assumptions. In this study, we propose a new pre-processing method, namely extended TNDC (ETNDC), to reduce signal uncertainty and matrix effects in the more complex analytical task of uranium determination.
RESULTS: ETNDC reflects the total number density variation with a weighted combination of spectral lines from all major elements and incorporates temperature and electron density compensation into the weighting coefficients. The method is evaluated on yellow cake samples and combined with regression models for uranium determination. Using the typical validation set and line combination, the mean relative standard deviation (RSD) of U II 417.159 nm in validation samples decreases from 4.92% to 2.27%, and the root mean square error of prediction (RMSEP) and the mean RSD of prediction results decrease from 4.81% to 1.93% and from 1.92% to 1.56%, respectively. Furthermore, the results of 10 validation sets and 216 line combinations show that ETNDC outperforms baseline methods in terms of average performance and robustness.
CONCLUSIONS: For the first time, ETNDC explicitly addresses the temperature and electron density variations while compensating for the total number density variation, where the inaccurate spectroscopic parameters are avoided by fitting related quantities using concentration information. The method demonstrates effective and robust improvement in signal repeatability and analytical performance in uranium determination, facilitating accurate quantification of the LIBS technique.

Prior surface-enhanced Raman spectroscopy (SERS) research has shown that pre-processing is necessary before analysis. Pre-processing also typically serves the dual purposes of removing the auto-fluorescence background and minimizing data volatility. This method allows for a more accurate comparison of spectral traits and relative SERS peak strength. However, because there are so many different kinds of samples, it can take a long time, and there is no assurance that the approach chosen will work well with a particular kind of sample. Therefore, this study employed a deep learning technique called multi-layer perceptron (MLP) to simplify the pre-processing of blood plasma SERS samples in patients with prostate cancer (PC), as well as to enhance the sensitivity and specificity of diagnosis using SERS technology. First of all, significant variations in peak intensity can be observed in the difference spectra, facilitating differentiation between PC and normal groups. Second, the data analysis was carried out in three different stages (raw data, defluorescenced data, and normalized data) using principal component analysis and linear discriminant analysis (PCA-LDA), as well as PCA-multi-layer perceptron (PCA-MLP). Finally, when SERS data was analyzed using PCA-LDA, there were significant differences in classification accuracy across each stage (The classification accuracy of three different stages were 76.90%, 85.60%, 95.20%, respectively). However, when PCA-MLP was utilized for SERS data analysis, the classification accuracy remained consistently high and stable (The classification accuracy of three different stages were 92.00%, 92.40%, 96.70%, respectively). The experimental results of PCA-MLP for classifying specific SERS data indicate that analyzing raw data directly can simplify the experimental process and enhance the efficacy of SERS analysis.

BACKGROUND: Glaucoma can cause irreversible blindness to people\'s eyesight. Since there are no symptoms in its early stage, it is particularly important to accurately segment the optic disc (OD) and optic cup (OC) from fundus medical images for the screening and prevention of glaucoma. In recent years, the mainstream method of OD and OC segmentation is convolution neural network (CNN). However, most existing CNN methods segment OD and OC separately and ignore the a priori information that OC is always contained inside the OD region, which makes the segmentation accuracy of most methods not high enough.
METHODS: This paper proposes a new encoder-decoder segmentation structure, called RSAP-Net, for joint segmentation of OD and OC. We first designed an efficient U-shaped segmentation network as the backbone. Considering the spatial overlap relationship between OD and OC, a new Residual spatial attention path is proposed to connect the encoder-decoder to retain more characteristic information. In order to further improve the segmentation performance, a pre-processing method called MSRCR-PT (Multi-Scale Retinex Colour Recovery and Polar Transformation) has been devised. It incorporates a multi-scale Retinex colour recovery algorithm and a polar coordinate transformation, which can help RSAP-Net to produce more refined boundaries of the optic disc and the optic cup.
RESULTS: The experimental results show that our method achieves excellent segmentation performance on the Drishti-GS1 standard dataset. In the OD and OC segmentation effects, the F1 scores are 0.9752 and 0.9012, respectively. The BLE are 6.33 pixels and 11.97 pixels, respectively.
CONCLUSIONS: This paper presents a new framework for the joint segmentation of optic discs and optic cups, called RSAP-Net. The framework mainly consists of a U-shaped segmentation skeleton and a residual space attention path module. The design of a pre-processing method called MSRCR-PT for the OD/OC segmentation task can improve segmentation performance. The method was evaluated on the publicly available Drishti-GS1 standard dataset and proved to be effective.

Metaverse, which is anticipated to be the future of the internet, is a 3D virtual world in which users interact via highly customizable computer avatars. It is considerably promising for several industries, including gaming, education, and business. However, it still has drawbacks, particularly in the privacy and identity threads. When a person joins the metaverse via a virtual reality (VR) human-robot equipment, their avatar, digital assets, and private information may be compromised by cybercriminals. This paper introduces a specific Finger Vein Recognition approach for the virtual reality (VR) human-robot equipment of the metaverse of the Metaverse to prevent others from misappropriating it. Finger vein is a is a biometric feature hidden beneath our skin. It is considerably more secure in person verification than other hand-based biometric characteristics such as finger print and palm print since it is difficult to imitate. Most conventional finger vein recognition systems that use hand-crafted features are ineffective, especially for images with low quality, low contrast, scale variation, translation, and rotation. Deep learning methods have been demonstrated to be more successful than traditional methods in computer vision. This paper develops a finger vein recognition system based on a convolution neural network and anti-aliasing technique. We employ/ utilize a contrast image enhancement algorithm in the preprocessing step to improve performance of the system. The proposed approach is evaluated on three publicly available finger vein datasets. Experimental results show that our proposed method outperforms the current state-of-the-art methods, improvement of 97.66% accuracy on FVUSM dataset, 99.94% accuracy on SDUMLA dataset, and 88.19% accuracy on THUFV2 dataset.

High signal uncertainty has been regarded as a critical obstacle for the quantitative analysis of laser-induced breakdown spectroscopy (LIBS). One of the most effective ways for uncertainty reduction is to directly compensate for the variation of plasma properties, especially total number density. However, reliable compensation for the variation of total number density is hard to implement. In this work, we propose a data pre-processing method, called total number density compensation (TNDC), to reduce signal uncertainty. It is established on an assumption extended from the internal standard method and utilizes a weighted sum of emission lines from all major elements to reflect the variation of total number density. The TNDC method is tested on 29 brass samples and outperforms common normalization methods based on the spectral area in terms of signal repeatability and analytical performance. For Cu, the mean pulse-to-pulse relative standard deviation (RSD) of signals is greatly decreased from 5.10% to 1.03%, which is almost the best signal repeatability that LIBS can achieve and is comparable to that of ICP-OES. The root mean square error of prediction (RMSEP) and the mean RSD of prediction are decreased from 6.56% to 0.60% and from 12.00% to 1.03%, respectively. While for Zn, the mean RSD of signals improves from 6.43% to 4.12%, and the RMSEP is reduced from 1.57% to 0.59% with the RSD of prediction from 5.41% to 4.18%. Results demonstrate that TNDC can be an effective method for LIBS analysis especially for repeatability improvement.

Magnetoencephalography (MEG) allows for quantifying modulations of human neuronal activity on a millisecond time scale while also making it possible to estimate the location of the underlying neuronal sources. The technique relies heavily on signal processing and source modelling. To this end, there are several open-source toolboxes developed by the community. While these toolboxes are powerful as they provide a wealth of options for analyses, the many options also pose a challenge for reproducible research as well as for researchers new to the field. The FLUX pipeline aims to make the analyses steps and setting explicit for standard analysis done in cognitive neuroscience. It focuses on quantifying and source localization of oscillatory brain activity, but it can also be used for event-related fields and multivariate pattern analysis. The pipeline is derived from the Cogitate consortium addressing a set of concrete cognitive neuroscience questions. Specifically, the pipeline including documented code is defined for MNE Python (a Python toolbox) and FieldTrip (a Matlab toolbox), and a data set on visuospatial attention is used to illustrate the steps. The scripts are provided as notebooks implemented in Jupyter Notebook and MATLAB Live Editor providing explanations, justifications and graphical outputs for the essential steps. Furthermore, we also provide suggestions for text and parameter settings to be used in registrations and publications to improve replicability and facilitate pre-registrations. The FLUX can be used for education either in self-studies or guided workshops. We expect that the FLUX pipeline will strengthen the field of MEG by providing some standardization on the basic analysis steps and by aligning approaches across toolboxes. Furthermore, we also aim to support new researchers entering the field by providing education and training. The FLUX pipeline is not meant to be static; it will evolve with the development of the toolboxes and with new insights. Furthermore, with the anticipated increase in MEG systems based on the Optically Pumped Magnetometers, the pipeline will also evolve to embrace these developments.

As it is high in value, extra virgin olive oil (EVOO) is frequently blended with inferior vegetable oils. This study presents an optical method for determining the adulteration level of EVOO with soybean oil as well as peanut oil using LED-induced fluorescence spectroscopy. Eight LEDs with central wavelengths from ultra-violet (UV) to blue are tested to induce the fluorescence spectra of EVOO, peanut oil, and soybean oil, and the UV LED of 372 nm is selected for further detection. Samples are prepared by mixing olive oil with different volume fractions of peanut or soybean oil, and their fluorescence spectra are collected. Different pre-processing and regression methods are utilized to build the prediction model, and good linearity is obtained between the predicted and actual adulteration concentration. This result, accompanied by the non-destruction and no pre-treatment characteristics, proves that it is feasible to use LED-induced fluorescence spectroscopy as a way to investigate the EVOO adulteration level, and paves the way for building a hand-hold device that can be applied to real market conditions in the future.

Until now, the over-exploitation of wild resources has increased growing concern over the quality of wild medicinal plants. This led to the necessity of developing a rapid method for the evaluation of wild medicinal plants. In this study, the content of total secoiridoids (gentiopicroside, swertiamarin, and sweroside) of Gentiana rigescens from 37 different regions in southwest China were analyzed by high performance liquid chromatography (HPLC). Furthermore, Fourier transform infrared (FT-IR) was adopted to trace the geographical origin (331 individuals) and predict the content of total secoiridoids (273 individuals). In the traditional FT-IR analysis, only one scatter correction technique could be selected from a series of preprocessing candidates to decrease the impact of the light correcting effect. Nevertheless, different scatter correction techniques may carry complementary information so that using the single scatter correction technique is sub-optimal. Hence, the emerging ensemble approach to preprocessing fusion, sequential preprocessing through orthogonalization (SPORT), was carried out to fuse the complementary information linked to different preprocessing methods. The results suggested that, compared with the best results obtained on the scatter correction modeling, SPORT increased the accuracy of the test set by 12.8% in qualitative analysis and decreased the RMSEP by 66.7% in quantitative analysis.