Nuclear Receptor Subfamily 1, Group D, Member 1

核受体亚家族 1, D 组,成员 1
  • 文章类型: Journal Article
    帕金森病(PD)的特征是星形胶质细胞激活和昼夜节律中断。在星形胶质细胞群体中,存在两种不同的反应状态:A1和A2。A1星形胶质细胞与神经毒性和炎症有关,而A2星形胶质细胞表现出神经保护功能。我们的调查集中在REV-ERBα的作用上,核受体超家族的成员和昼夜节律时钟的关键调节者,星形胶质细胞激活。我们观察到A1星形胶质细胞中REV-ERBα的表达降低到其正常水平的三分之一。值得注意的是,REV-ERBα的激活促使星形胶质细胞从A1转化为A2。机械上,REV-ERBα抑制与经典NF-κB途径有关,同时抑制了STAT3途径。此外,REV-ERBα低表达的星形胶质细胞与多巴胺能神经元凋亡有关。有趣的是,当使用REV-ERBα激动剂时,观察到相反的效果,减轻星形胶质细胞激活和减少50%的多巴胺能神经元损伤。总之,我们的研究阐明了REV-ERBα在调节星形胶质细胞功能中的关键作用及其在PD发病机制中的潜在意义.
    Parkinson\'s disease (PD) is characterized by astrocyte activation and disruptions in circadian rhythm. Within the astrocyte population, two distinct reactive states exist: A1 and A2. A1 astrocytes are associated with neurotoxicity and inflammation, while A2 astrocytes exhibit neuroprotective functions. Our investigation focused on the role of REV-ERBα, a member of the nuclear receptor superfamily and a key regulator of the circadian clock, in astrocyte activation. We observed that REV-ERBα expression in A1 astrocytes was reduced to one-third of its normal level. Notably, activation of REV-ERBα prompted a transformation of astrocytes from A1 to A2. Mechanistically, REV-ERBα inhibition was linked to the classical NF-κB pathway, while it concurrently suppressed the STAT3 pathway. Furthermore, astrocytes with low REV-ERBα expression were associated with dopaminergic neurons apoptosis. Intriguingly, the opposite effect was observed when using a REV-ERBα agonist, which mitigated astrocyte activation and reduced dopaminergic neuron damage by 50%. In summary, our study elucidates the pivotal role of REV-ERBα in modulating astrocyte function and its potential implications in PD pathogenesis.
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  • 文章类型: Journal Article
    昼夜节律失调涉及脊髓损伤(SCI)的病理生理学。昼夜节律的调节为SCI治疗带来了希望。这里,我们旨在研究嗅鞘细胞(OEC)通过调节小胶质细胞时钟基因表达减轻神经炎症的机制。在这项研究中,SCI年夜鼠随机分为OEC组和媒介物组。手术后1天,将OECs静脉移植到OEC组SCI大鼠中,而媒介物组的大鼠接受培养基。OEC移植后7天,从大脑收集组织(前额叶皮质,下丘脑,脊髓)用于PCR,在zeitgeber时间(ZT)6,ZT12,ZT18和ZT24进行蛋白质印迹和免疫组织化学(IHC)测定。通过实验抑制基因表达和共培养实验研究了OEC在调节小胶质细胞REV-ERBα中的作用。在车辆组中,IHC显示与对照组相比,Iba-1在脑白质和脊髓中的表达显着增加(所有比较均P<0.0001)。Iba-1的表达显著降低(所有比较P<0.0001)。在OEC组中,PER1,PER2,CLOCK,REV-ERBα在脊髓和脑区均有节奏。SCI打乱了他们典型的节奏。OECs移植可以通过上调REV-ERBα来调节这些失调。体外研究表明,OECs不能降低REV-ERBα抑制小胶质细胞的活化。OECs的静脉移植可以通过上调SCI后的REV-ERBα来介导脑和脊髓小胶质细胞的活化。
    Circadian dysregulation involved in the pathophysiology of spinal cord injury (SCI). Modulation of circadian rhythms hold promise for the SCI treatment. Here, we aim to investigated the mechanism of olfactory ensheathing cells (OEC) in alleviating neuroinflammation via modulating clock gene expression in microglia. In this study, SCI rats were randomly divided into OEC group and vehicle group. At 1 day after the surgery, OECs were intravenously transplanted into OEC group SCI rat, while the rats in vehicle group received culture medium. After 7 days post of OEC transplantation, tissues were collected from the brain (prefrontal cortex, hypothalamus, spinal cord) for PCR, western blotting and immunohistochemistry (IHC) assay at zeitgeber time (ZT) 6, ZT 12, ZT 18, and ZT 24. The roles of OEC in modulating REV-ERBα in microglia were studied by experimental inhibition of gene expression and the co-culture experiment. In the vehicle group, IHC showed a significant increase of Iba-1 expression in the cerebral white matter and spinal cord compared with control group (P < 0.0001 for all comparisons). The expression of Iba-1 was significantly decreased (P < 0.0001 for all comparisons). In the OEC group, the expression of PER 1, PER 2, CLOCK, and REV-ERBα was in a rhythmical manner in both spinal cord and brain regions. SCI disrupted their typical rhythms. And OECs transplantation could modulate those dysregulations by upregulating REV-ERBα. In vitro study showed that OECs couldn\'t reduce the activation of REV-ERBα inhibited microglia. The intravenous transplantation of OECs can mediate cerebral and spinal microglia activation through upregulation REV-ERBα after SCI.
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  • 文章类型: Journal Article
    SR9009是REV-ERBs的激活剂,具有多种生物活性,包括提高运动耐量和控制骨骼肌质量。为了优化SR9009的氨基甲酸酯基序,合成并评估SR9009的类似物。它们均具有REV-ERB-α激动剂活性。其中,5a,5f,5g,5m,5p在体外显示出相当于或略高于SR9009的效力。这些数据表明卤代苄基是这些化合物中不可缺少的活性基团。5m,5p和SR9009进步了体内正常小鼠的运动耐量。此外,在高脂血症小鼠中,5m和5p不仅提高了运动耐量,而且降低了血脂水平。5m和5p显示出比SR9009更强的降血糖活性。
    SR9009 is an activator of REV-ERBs with diverse biological activities, including improving exercise tolerance and controlling skeletal muscle mass. To optimise the carbamate motif of SR9009, analogues of SR9009 were synthesised and evaluated. All of them showed REV-ERB-α agonist activities. Among them, 5a, 5f, 5 g, 5m, and 5p showed potencies equivalent to or slightly higher than the potency of SR9009 in vitro. These data indicate that the halogenated benzyl group is an indispensable active group in these compounds. 5m, 5p and SR9009 improved exercise tolerance in normal mice in vivo. Additionally, in hyperlipidemic mice, 5m and 5p not only improved exercise tolerance but also lowered blood lipid levels. 5m and 5p displayed stronger hypoglycaemic activity than SR9009.
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  • 文章类型: Journal Article
    目的:探讨妊娠期过度光照对大鼠宫内发育及新生儿早期生长的影响。
    方法:妊娠大鼠随机分为三组:持续光照组,非光照组和对照组。从尾静脉收集血样以分析褪黑激素和皮质醇水平。重量,记录每日食物和水的消耗量.子宫重量,在妊娠第19天测量胎盘重量和胎盘直径。还监测了自然出生和新生儿生长。NR1D1(核受体亚家族1组D成员1)在子代SCN(视交叉上核)中的表达,测量肝脏和脂肪组织。还测量了NR1D1,MT1(褪黑激素1A受体)和11β-HSD2(胎盘11β-羟基类固醇脱氢酶2型)在胎盘中的表达。最后,在NR1D1siRNA转染的JEG-3细胞中评估MT1和11β-HSD2的表达。
    结果:孕妇体重增加无显著差异,妊娠持续时间,子宫重量,胎盘体重,胎盘直径,三组胎儿数。出生时后代的体重或长度没有显着差异。与其他两组相比,持续光照组的后代在出生后第21天的生长速度明显更快。NR1D1在SCN中的表达,后代的肝脏和脂肪组织在三组之间没有显着差异。常光照射组的母体血清褪黑素和皮质醇水平低于和高于其他两组,分别。持续光照组胎盘组织中NR1D1、MT1和11β-HSD2的表达均降低。NR1D1siRNA转染后,JEG-3细胞中MT1和11β-HSD2的表达降低。
    结论:怀孕期间过度的光照会导致皮质醇升高和褪黑激素对子宫胎儿的暴露减少,可能有助于加速大鼠后代的早期生长。
    OBJECTIVE: To investigate the effects of excessive light exposure during gestation on intrauterine development and early growth of neonates in rats.
    METHODS: Pregnant rats were randomly allocated to three groups: the constant light exposure group, non-light exposure group and control group. Blood samples were collected from the tail vein to analyze melatonin and cortisol levels. Weight, daily food and water consumption were recorded. Uterine weight, placental weight and placental diameter were measured on gestational day 19. Natural birth and neonate growth were also monitored. The expression of NR1D1(nuclear receptor subfamily 1 group D member 1) in offspring\'s SCN (suprachiasmatic nuclei), liver and adipose tissue was measured. Expression of NR1D1, MT1(melatonin 1 A receptor) and 11β-HSD2 (placental 11β-hydroxysteroid dehydrogenase type 2) in placenta was also measured. Finally, the expression of MT1 and 11β-HSD2 in NR1D1 siRNA transfected JEG-3 cells was evaluated.
    RESULTS: There were no significant differences in maternal weight gain, pregnancy duration, uterine weight, placental body weight, placental diameter, fetal number among three groups. There were no significant differences in weights or lengths of offspring at birth. Compared to other two groups, constant light exposure group showed significantly more rapid growth of offspring in 21st day post-birth. The expression of NR1D1 in SCN, liver and adipose tissues of offspring was not significantly different among three groups. The maternal serum melatonin and cortisol levels of the constant light exposure group were lower and higher than other two groups, respectively. The expressions of NR1D1, MT1 and 11β-HSD2 were all decreased in placenta of the constant light exposure group. The expression of MT1 and 11β-HSD2 in JEG-3 cells were decreased after NR1D1 siRNA transfection.
    CONCLUSIONS: Excessive light exposure during pregnancy results in elevated cortisol and reduced melatonin exposure to fetuses in uterus, potentially contributing to an accelerated early growth of offspring in rats.
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  • 文章类型: Journal Article
    背景:尽管人们早已认识到过敏性鼻炎(AR)的日常节律,这种现象背后的分子机制仍然是神秘的。
    目的:我们旨在研究昼夜节律在AR发育中的作用,并阐明AR每日节律产生的机制。
    方法:使用卵清蛋白方法在小鼠中诱导AR。甲苯胺蓝染色,LC-MS/MS分析,qPCR,用AR和对照小鼠进行免疫印迹。
    结果:卵清蛋白诱导的AR具有昼夜节律,并与鼻粘膜中的时钟基因破坏有关。特别是,Rev-erbα通常下调,它的节奏保持不变,但相移接近12小时。此外,核心时钟基因Bmal1或Rev-erbα的全局敲除会增加小鼠对AR的易感性并减弱AR节律性。重要的是,鼻腔SCC(孤立的化学感受细胞)有节律激活,和SCC途径的抑制导致AR减弱和其节律丧失。此外,SCCs的节律性激活是由ChAT(一种负责乙酰胆碱合成的酶)的昼夜表达和神经递质乙酰胆碱的时间产生引起的。机械上,REV-ERBα通过直接结合到特定的反应元件来反式抑制聊天,在这个目标基因中产生昼夜振荡。
    结论:这些发现确定了SCC,在REV-ERBα的控制下,作为AR节奏的驱动力,并建议将SCC作为AR管理的新途径。
    BACKGROUND: While the daily rhythm of allergic rhinitis (AR) has long been recognized, the molecular mechanism underlying this phenomenon remains enigmatic.
    OBJECTIVE: We aimed to investigate the role of circadian clock in AR development and to clarify the mechanism by which the daily rhythm of AR is generated.
    METHODS: AR was induced in mice with ovalbumin. Toluidine blue staining, liquid chromatography-tandem mass spectrometry analysis, real-time quantitative PCR, and immunoblotting were performed with AR and control mice.
    RESULTS: Ovalbumin-induced AR is diurnally rhythmic and associated with clock gene disruption in nasal mucosa. In particular, Rev-erbα is generally downregulated and its rhythm retained, but with a near-12-hour phase shift. Furthermore, global knockout of core clock gene Bmal1 or Rev-erbα increases the susceptibility of mice to AR and blunts AR rhythmicity. Importantly, nasal solitary chemosensory cells (SCCs) are rhythmically activated, and inhibition of the SCC pathway leads to attenuated AR and a loss of its rhythm. Moreover, rhythmic activation of SCCs is accounted for by diurnal expression of ChAT (an enzyme responsible for the synthesis of acetylcholine) and temporal generation of the neurotransmitter acetylcholine. Mechanistically, Rev-erbα trans-represses Chat through direct binding to a specific response element, generating a diurnal oscillation in this target gene.
    CONCLUSIONS: SCCs, under the control of Rev-erbα, are a driver of AR rhythmicity; targeting SCCs should be considered as a new avenue for AR management.
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  • 文章类型: Journal Article
    众所周知,长期太空飞行会导致昼夜节律中断,由位于下丘脑视交叉上核(SCN)的中央起搏器驱动,但潜在的分子机制仍不清楚。这里,我们开发了一种大鼠模型,通过尾部悬吊和隔离(TSI)模拟微重力和隔离环境。我们发现TSI环境会对核心体温造成昼夜节律破坏,心率,和大鼠的运动活动节律,尤其是这些节奏的幅度。在TSI模型大鼠中,核心昼夜节律基因NR1D1显示出更高的蛋白质而不是mRNA水平,随着BMAL1水平的降低,这表明NR1D1可以通过翻译后调节来调节。自噬体标记物LC3可以通过LC3相互作用区(LIR)基序直接与NR1D1结合,并以线粒体自噬依赖性方式诱导NR1D1降解。线粒体自噬的缺陷导致NR1D1降解的逆转,从而抑制BMAL1的表达。在TSI模型的SCN中观察到线粒体自噬缺陷和随后的线粒体功能障碍。尿磷脂A(UA),线粒体自噬激活剂,表现出增强核心体温振幅的能力,心率,通过促进线粒体自噬诱导降解NR1D1来实现运动活动节律。累计,我们的结果表明,线粒体自噬通过调节NR1D1降解来发挥昼夜节律控制,揭示线粒体自噬是长期太空飞行以及SCN昼夜节律紊乱疾病的潜在靶标。
    Long-term spaceflight is known to induce disruptions in circadian rhythms, which are driven by a central pacemaker located in the suprachiasmatic nucleus (SCN) of the hypothalamus, but the underlying molecular mechanisms remain unclear. Here, we developed a rat model that simulated microgravity and isolation environments through tail suspension and isolation (TSI). We found that the TSI environment imposed circadian disruptions to the core body temperature, heart rate, and locomotor-activity rhythms of rats, especially in the amplitude of these rhythms. In TSI model rats\' SCNs, the core circadian gene NR1D1 showed higher protein but not mRNA levels along with decreased BMAL1 levels, which indicated that NR1D1 could be regulated through post-translational regulation. The autophagosome marker LC3 could directly bind to NR1D1 via the LC3-interacting region (LIR) motifs and induce the degradation of NR1D1 in a mitophagy-dependent manner. Defects in mitophagy led to the reversal of NR1D1 degradation, thereby suppressing the expression of BMAL1. Mitophagy deficiency and subsequent mitochondrial dysfunction were observed in the SCN of TSI models. Urolithin A (UA), a mitophagy activator, demonstrated an ability to enhance the amplitude of core body temperature, heart rate, and locomotor-activity rhythms by prompting mitophagy induction to degrade NR1D1. Cumulatively, our results demonstrate that mitophagy exerts circadian control by regulating NR1D1 degradation, revealing mitophagy as a potential target for long-term spaceflight as well as diseases with SCN circadian disruption.
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  • 文章类型: Journal Article
    糖尿病肾病(DKD)是糖尿病最常见的并发症之一。临床上没有特定的药物。我们先前已经证明,抑制微粒体前列腺素E合酶2(mPGES-2)通过增强β细胞功能和促进胰岛素产生来减轻2型糖尿病。然而,mPGES-2是否参与DKD尚不清楚.这里,我们旨在分析mPGES-2表达增强与肾脂代谢稳态受损以及随后的肾损害之间的关联.值得注意的是,mPGES-2的整体敲除或药物阻断减轻了糖尿病足细胞损伤和肾小管间质纤维化,从而改善脂质积累和脂毒性。这些发现在足细胞或小管特异性mPGES-2缺陷小鼠中得到进一步证实。机械上,mPGES-2和Rev-Erbα竞争血红素结合以调节糖尿病肾脏中脂肪酸结合蛋白5的表达和脂质代谢。我们的发现提示了通过mPGES-2抑制治疗DKD的潜在策略。
    Diabetic kidney disease (DKD) is one of the most common complications of diabetes, and no specific drugs are clinically available. We have previously demonstrated that inhibiting microsomal prostaglandin E synthase-2 (mPGES-2) alleviated type 2 diabetes by enhancing β cell function and promoting insulin production. However, the involvement of mPGES-2 in DKD remains unclear. Here, we aimed to analyze the association of enhanced mPGES-2 expression with impaired metabolic homeostasis of renal lipids and subsequent renal damage. Notably, global knockout or pharmacological blockage of mPGES-2 attenuated diabetic podocyte injury and tubulointerstitial fibrosis, thereby ameliorating lipid accumulation and lipotoxicity. These findings were further confirmed in podocyte- or tubule-specific mPGES-2-deficient mice. Mechanistically, mPGES-2 and Rev-Erbα competed for heme binding to regulate fatty acid binding protein 5 expression and lipid metabolism in the diabetic kidney. Our findings suggest a potential strategy for treating DKD via mPGES-2 inhibition.
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  • 文章类型: Journal Article
    背景:ApoA5主要由肝脏合成和分泌,是脂蛋白脂肪酶(LPL)活性和富含甘油三酯的脂蛋白(TRLs)的关键调节剂。尽管ApoA5在循环中的肝外甘油三酯(TG)代谢中的作用已得到充分证明,ApoA5与非酒精性脂肪性肝病(NAFLD)之间的关系尚不完全清楚,潜在的分子机制仍有待阐明.方法:我们使用CRISPR/Cas9基因编辑从叙利亚金仓鼠中删除Apoa5基因,复制人类代谢特征的小型啮齿动物模型。然后,ApoA5缺陷型(ApoA5-/-)仓鼠用于研究有或没有挑战高脂肪饮食(HFD)的NAFLD。结果:ApoA5-/-仓鼠表现出高甘油三酯血症(HTG),在2300mg/dL时TG水平显着升高,在常规饮食下肝脏脂肪变性,伴随着脂肪组织中调节脂肪分解和小脂肪细胞的基因表达水平的增加。HFD攻击使ApoA5-/-仓鼠易患重度HTG(sHTG)和非酒精性脂肪性肝炎(NASH)。体外和体内机制研究表明,靶向ApoA5会破坏HepG2细胞和肝脏中NR1D1mRNA的稳定性,从而分别降低NR1D1的mRNA和蛋白质水平。腺相关病毒8(AAV8)在ApoA5-/-仓鼠肝脏中过表达人NR1D1可显着改善脂肪肝,而不影响血浆脂质水平。此外,通过冷暴露或CL316243给药恢复肝脏ApoA5或激活棕色脂肪组织(BAT)中的UCP1可以显着纠正ApoA5-/-仓鼠的sHTG和肝脏脂肪变性。结论:我们的数据表明,仓鼠ApoA5缺乏引起的HTG足以引起肝脏脂肪变性,HFD通过降低肝脏NR1D1mRNA和蛋白水平加重NAFLD,这提供了ApoA5和NAFLD之间的机械联系,并提出了在未来的临床试验中治疗HTG和由于ApoA5缺乏引起的相关疾病的潜在治疗方法的新见解。
    Background: ApoA5 mainly synthesized and secreted by liver is a key modulator of lipoprotein lipase (LPL) activity and triglyceride-rich lipoproteins (TRLs). Although the role of ApoA5 in extrahepatic triglyceride (TG) metabolism in circulation has been well documented, the relationship between ApoA5 and nonalcoholic fatty liver disease (NAFLD) remains incompletely understood and the underlying molecular mechanism still needs to be elucidated. Methods: We used CRISPR/Cas9 gene editing to delete Apoa5 gene from Syrian golden hamster, a small rodent model replicating human metabolic features. Then, the ApoA5-deficient (ApoA5-/-) hamsters were used to investigate NAFLD with or without challenging a high fat diet (HFD). Results: ApoA5-/- hamsters exhibited hypertriglyceridemia (HTG) with markedly elevated TG levels at 2300 mg/dL and hepatic steatosis on a regular chow diet, accompanied with an increase in the expression levels of genes regulating lipolysis and small adipocytes in the adipose tissue. An HFD challenge predisposed ApoA5-/- hamsters to severe HTG (sHTG) and nonalcoholic steatohepatitis (NASH). Mechanistic studies in vitro and in vivo revealed that targeting ApoA5 disrupted NR1D1 mRNA stability in the HepG2 cells and the liver to reduce both mRNA and protein levels of NR1D1, respectively. Overexpression of human NR1D1 by adeno-associated virus 8 (AAV8) in the livers of ApoA5-/- hamsters significantly ameliorated fatty liver without affecting plasma lipid levels. Moreover, restoration of hepatic ApoA5 or activation of UCP1 in brown adipose tissue (BAT) by cold exposure or CL316243 administration could significantly correct sHTG and hepatic steatosis in ApoA5-/- hamsters. Conclusions: Our data demonstrate that HTG caused by ApoA5 deficiency in hamsters is sufficient to elicit hepatic steatosis and HFD aggravates NAFLD by reducing hepatic NR1D1 mRNA and protein levels, which provides a mechanistic link between ApoA5 and NAFLD and suggests the new insights into the potential therapeutic approaches for the treatment of HTG and the related disorders due to ApoA5 deficiency in the clinical trials in future.
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  • 文章类型: Journal Article
    目的:探讨核受体亚家族1组D成员1(NR1D1)和核受体亚家族2组E成员3(NR2E3)在视网膜母细胞瘤(RB)中的表达及其与RB临床病理特征的关系。
    方法:进行免疫组织化学(IHC)测定以检测和评估石蜡包埋组织样品中NR1D1和NR2E3的表达水平。采用χ2检验或Fisher精确检验分析RB患者的表达水平与临床病理特征之间的关系。
    结果:共有51例RB患者参与了这项研究。NR1D1(P=0.004)和NR2E3(P=0.024)在RB肿瘤组织中的表达水平明显低于正常视网膜。NR1D1和NR2E3在晚期RB患者中的阳性表达程度较低(P=0.007,P=0.015),脉络膜浸润(P=0.003,P=0.029),视神经浸润(P=0.036,P=0.003)。此外,NR2E3的低表达水平与RB组织的高风险病理(P=0.025)和坏死(P=0.035)相关。
    结论:NR1D1和NR2E3在RB中的表达水平降低,并与疾病的临床分期和高侵袭性密切相关。这些发现为RB进展的机制提供了新的见解,并表明NR1D1和NR2E3可能是治疗策略的潜在靶标。
    OBJECTIVE: To investigate the expression of nuclear receptor subfamily 1 group D member 1 (NR1D1) and nuclear receptor subfamily 2 group E Member 3 (NR2E3) in retinoblastoma (RB) and their correlation with the clinical and pathological features of RB.
    METHODS: Immunohistochemical (IHC) assays were performed to detect and evaluate the expression levels of NR1D1 and NR2E3 in paraffin-embedded tissue samples. The relationship between the expression levels and clinicopathological characteristics of RB patients was analyzed using the χ2 test or Fisher exact test.
    RESULTS: A total of 51 RB patients were involved in this research. The expression levels of NR1D1 (P = 0.004) and NR2E3 (P = 0.024) were significantly lower in RB tumor tissues than in normal retina. The expression levels of NR1D1 and NR2E3 were less positive in RB patients with advanced stages (P = 0.007, P = 0.015), choroidal infiltration (P = 0.003, P = 0.029), and optic nerve infiltration (P = 0.036, P = 0.003). In addition, a low expression level of NR2E3 was associated with high-risk pathology (P = 0.025) and necrosis (P = 0.035) of RB tissues.
    CONCLUSIONS: The expression levels of NR1D1 and NR2E3 were decreased in RB and closely associated with the clinical stage and high invasion of the disease. These findings provide new insights into the mechanism of RB progression and suggest that NR1D1 and NR2E3 could be potential targets for treatment strategies.
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  • 文章类型: Journal Article
    背景:胃癌是世界范围内主要的公共卫生问题之一。由生物钟基因驱动的昼夜节律紊乱在癌症的发展中起作用。然而,昼夜节律基因是否可以作为胃癌的潜在治疗靶点和预后生物标志物仍然难以捉摸。
    方法:在本研究中,我们使用GEPIA等在线生物信息学数据库全面分析了生物钟基因与胃癌之间的潜在关系,cBioPortal,STRING,遗传狂躁症,Metascape,TIMER,信任,和GEDS。
    结果:生物钟基因在人类肿瘤中的表达不同。与正常组织相比,只有PER1,时钟,而TIMELESS在胃癌中的表达差异有统计学意义(p<0.05)。PER1(p=0.0169)和CLOCK(p=0.0414)与胃癌病理分期有关(p<0.05)。PER1(p=0.0028)和NR1D1(p=0.016)高表达的胃癌患者总生存期较长,而PER1(p=0.042)和NR1D1(p=0.016)高表达的患者无病生存期更长。生物钟基因的主要功能与昼夜节律和褪黑素的代谢和作用有关。时钟,NPAS2和KAT2B是昼夜节律基因的关键转录因子。此外,我们还发现了昼夜节律基因与胃癌微环境中各种免疫细胞之间的重要相关性。
    结论:本研究可能建立基于生物钟基因的胃癌预后新指标,并利用生物钟基因靶点开发治疗胃癌的新药。
    BACKGROUND: Gastric cancer is one of the major public health problems worldwide. Circadian rhythm disturbances driven by circadian clock genes play a role in the development of cancer. However, whether circadian clock genes can serve as potential therapeutic targets and prognostic biomarkers for gastric cancer remains elusive.
    METHODS: In this study, we comprehensively analyzed the potential relationship between circadian clock genes and gastric cancer using online bioinformatics databases such as GEPIA, cBioPortal, STRING, GeneMANIA, Metascape, TIMER, TRRUST, and GEDS.
    RESULTS: Biological clock genes are expressed differently in human tumors. Compared with normal tissues, only PER1, CLOCK, and TIMELESS expression differences were statistically significant in gastric cancer (p < 0.05). PER1 (p = 0.0169) and CLOCK (p = 0.0414) were associated with gastric cancer pathological stage (p < 0.05). Gastric cancer patients with high expression of PER1 (p = 0.0028) and NR1D1 (p = 0.016) had longer overall survival, while those with high expression of PER1 (p = 0.042) and NR1D1 (p = 0.016) had longer disease-free survival. The main function of the biological clock gene is related to the circadian rhythms and melatonin metabolism and effects. CLOCK, NPAS2, and KAT2B were key transcription factors for circadian clock genes. In addition, we also found important correlations between circadian clock genes and various immune cells in the gastric cancer microenvironment.
    CONCLUSIONS: This study may establish a new gastric cancer prognostic indicator based on the biological clock gene and develop new drugs for the treatment of gastric cancer using biological clock gene targets.
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