Histological Techniques

组织学技术
  • 文章类型: Journal Article
    Objective.从基因组数据中有效融合组织学切片和分子谱在神经胶质瘤的诊断和预后中显示出巨大的潜力。然而,明确利用不同治疗模式之间的一致互补信息并创建患者的全面表征仍然具有挑战性.此外,现有的研究主要集中在完整的多模态数据上,通常无法为不完全样本构建鲁棒模型。方法。在本文中,我们提出了用于神经胶质瘤诊断和预后的adual-space解纠缠多模式网络(DDM-net)。DDM-net通过双空间解纠缠方法将两个单独的变分自编码器(VAE)生成的潜在特征解纠缠到公共和特定组件中,促进患者综合陈述的构建。更重要的是,DDM-net在潜在特征空间中估算不可用的模态,使其对不完整的样本具有鲁棒性。主要结果。我们评估了我们在TCGA-GBMLGG数据集上用于神经胶质瘤分级和生存分析任务的方法。实验结果表明,与最先进的方法相比,该方法具有优越的性能,具有竞争力的AUC为0.952,C指数为0.768。意义。所提出的模型可以帮助临床了解神经胶质瘤,并且可以作为具有多模态数据的有效融合模型。此外,它能够处理不完整的样本,使其不受临床限制的限制。
    Objective. Effective fusion of histology slides and molecular profiles from genomic data has shown great potential in the diagnosis and prognosis of gliomas. However, it remains challenging to explicitly utilize the consistent-complementary information among different modalities and create comprehensive representations of patients. Additionally, existing researches mainly focus on complete multi-modality data and usually fail to construct robust models for incomplete samples.Approach. In this paper, we propose adual-space disentangled-multimodal network (DDM-net)for glioma diagnosis and prognosis. DDM-net disentangles the latent features generated by two separate variational autoencoders (VAEs) into common and specific components through a dual-space disentangled approach, facilitating the construction of comprehensive representations of patients. More importantly, DDM-net imputes the unavailable modality in the latent feature space, making it robust to incomplete samples.Main results. We evaluated our approach on the TCGA-GBMLGG dataset for glioma grading and survival analysis tasks. Experimental results demonstrate that the proposed method achieves superior performance compared to state-of-the-art methods, with a competitive AUC of 0.952 and a C-index of 0.768.Significance. The proposed model may help the clinical understanding of gliomas and can serve as an effective fusion model with multimodal data. Additionally, it is capable of handling incomplete samples, making it less constrained by clinical limitations.
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  • 文章类型: Journal Article
    提出了散射激光辐射场的相位扫描的干涉全息方法。证明了该方法选择各种分散组分的有效性。该方法使得在高水平的去极化背景下获得生物组织的极化图成为可能。此类图的比例选择性分析用于确定生物组织的光学各向异性结构中的坏死变化。
    生物组织扩散层中重复散射场的分层相位偏振法的开发和实验认可。在物场的各个相位部分中找到的偏振态坐标分布的比例选择处理的应用。确定组织学鉴别诊断生物组织光学各向异性坏死变化原因的标准(标记)。
    我们使用了三种仪器和分析方法的合成。生物组织样本散射的激光辐射的偏振干涉配准。数字全息重建和物场复杂振幅分布的分层相位扫描。分析确定重复散射辐射的各种相位横截面的偏振图。应用小波分析在物场单个散射分量的相平面中偏振态的分布.不同形态结构生物组织坏死改变鉴别诊断标准(标记物)的确定。考虑两种情况。第一种情况是因冠心病和急性冠状动脉功能不全而死亡的人的心肌。第二例是死亡的支气管哮喘和纤维化的肺组织样本。
    已经开发并通过实验实现了一种对生物组织的漫射物场进行偏振-干涉映射的方法。借助复杂振幅分布的数字全息重建,找到了扩散物场各个相位部分的偏振图。使用小波分析激光辐射的单个散射分量的相平面中偏振的方位角和椭圆率分布。确定了针对扫描盐状MHAT函数的不同尺度改变小波系数幅度的方案。对于方位角图的小波系数的幅度分布和极化的椭圆率,确定一阶至四阶的统计矩。因此,确定心肌和肺组织坏死变化的诊断标志物。发现的统计标准是确定其对生物组织各种坏死状态的鉴别诊断准确性的基础。
    由“冠状动脉疾病-急性冠状动脉功能不全”和“哮喘-肺纤维化”引起的坏死性变化通过极化干扰的小波分化方法证明,具有出色的准确性。
    UNASSIGNED: The interference-holographic method of phase scanning of fields of scattered laser radiation is proposed. The effectiveness of this method for the selection of variously dispersed components is demonstrated. This method made it possible to obtain polarization maps of biological tissues at a high level of depolarized background. The scale-selective analysis of such maps was used to determine necrotic changes in the optically anisotropic architectonics of biological tissues.
    UNASSIGNED: Development and experimental approbation of layered phase polarimetry of repeatedly scattered fields in diffuse layers of biological tissues. Application of scale-selective processing of the found coordinate distributions of polarization states in various phase sections of object fields. Determination of criteria (markers) for histological differential diagnosis of the causes of necrotic changes in optical anisotropy of biological tissues.
    UNASSIGNED: We used a synthesis of three instrumental and analytical methods. Polarization-interference registration of laser radiation scattered by a sample of biological tissue. Digital holographic reconstruction and layered phase scanning of distributions of complex amplitudes of the object field. Analytical determination of polarization maps of various phase cross-sections of repeatedly scattered radiation. Application of wavelet analysis of the distributions of polarization states in the phase plane of a single scattered component of an object field. Determination of criteria (markers) for differential diagnosis of necrotic changes in biological tissues with different morphological structure. Two cases are considered. The first case is the myocardium of those who died as a result of coronary heart disease and acute coronary insufficiency. The second case is lung tissue samples of deceased with bronchial asthma and fibrosis.
    UNASSIGNED: A method of polarization-interference mapping of diffuse object fields of biological tissues has been developed and experimentally implemented. With the help of digital holographic reconstruction of the distributions of complex amplitudes, polarization maps in various phase sections of a diffuse object field are found. The wavelet analysis of azimuth and ellipticity distributions of polarization in the phase plane of a single scattered component of laser radiation is used. Scenarios for changing the amplitude of the wavelet coefficients for different scales of the scanning salt-like MHAT function are determined. Statistical moments of the first to fourth orders are determined for the distributions of the amplitudes of the wavelet coefficients of the azimuth maps and the ellipticity of polarization. As a result, diagnostic markers of necrotic changes in the myocardium and lung tissue were determined. The statistical criteria found are the basis for determining the accuracy of their differential diagnosis of various necrotic states of biological tissues.
    UNASSIGNED: Necrotic changes caused by \"coronary artery disease-acute coronary insufficiency\" and \"asthma-pulmonary fibrosis\" were demonstrated by the method of wavelet differentiation with polarization interference with excellent accuracy.
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  • 文章类型: Journal Article
    核探测,分割和形态分析在帮助我们进一步了解组织学和患者预后之间的关系方面至关重要。为了推动这一领域的创新,我们使用同类最大的可用数据集评估核分割和细胞组成,设置了全社区的挑战。我们的挑战,名为CoNIC,通过在公共排行榜上进行实时结果检查,刺激了可重复的细胞识别算法的开发。我们使用1,658个结肠组织的全切片图像,基于表现最好的模型进行了广泛的挑战后分析。每个模型检测到大约7亿个原子核,相关特征用于发育不良分级和生存分析,在那里,我们证明了挑战的改进比以前的国家的最先进导致显著提升下游性能。我们的发现还表明嗜酸性粒细胞和嗜中性粒细胞在肿瘤微环境中起重要作用。我们发布挑战模型和WSI水平的结果,以促进生物标志物发现的进一步方法的发展。
    Nuclear detection, segmentation and morphometric profiling are essential in helping us further understand the relationship between histology and patient outcome. To drive innovation in this area, we setup a community-wide challenge using the largest available dataset of its kind to assess nuclear segmentation and cellular composition. Our challenge, named CoNIC, stimulated the development of reproducible algorithms for cellular recognition with real-time result inspection on public leaderboards. We conducted an extensive post-challenge analysis based on the top-performing models using 1,658 whole-slide images of colon tissue. With around 700 million detected nuclei per model, associated features were used for dysplasia grading and survival analysis, where we demonstrated that the challenge\'s improvement over the previous state-of-the-art led to significant boosts in downstream performance. Our findings also suggest that eosinophils and neutrophils play an important role in the tumour microevironment. We release challenge models and WSI-level results to foster the development of further methods for biomarker discovery.
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  • 文章类型: Journal Article
    癌症仍然是全球健康挑战,要求早期检测和准确诊断,以改善患者预后。引入了一种智能范式,该范式通过对比逐片学习来提升无标签非线性光学成像,产生无染色非线性光学计算组织学(NOCH)。NOCH启用Swift,新鲜组织的精确诊断分析,减少患者焦虑和医疗费用。对非线性模态进行评估,包括受激拉曼散射和多光子成像,增强肿瘤微环境敏感性的能力,病理分析,和癌症检查。定量分析证实,NOCH图像准确地再现了不同癌症阶段的核形态特征。主要诊断功能,如核形态,尺寸,和核-细胞质对比,保存得很好。当应用于其他病理组织时,NOCH模型也证明了有希望的推广。该研究使用对比学习将无标记的非线性光学成像与组织病理学相结合,以建立无染色的计算组织学。NOCH提供了一个快速,非侵入性,精确的手术病理学方法,拥有巨大的潜力,彻底改变癌症诊断和手术干预。
    Cancer remains a global health challenge, demanding early detection and accurate diagnosis for improved patient outcomes. An intelligent paradigm is introduced that elevates label-free nonlinear optical imaging with contrastive patch-wise learning, yielding stain-free nonlinear optical computational histology (NOCH). NOCH enables swift, precise diagnostic analysis of fresh tissues, reducing patient anxiety and healthcare costs. Nonlinear modalities are evaluated, including stimulated Raman scattering and multiphoton imaging, for their ability to enhance tumor microenvironment sensitivity, pathological analysis, and cancer examination. Quantitative analysis confirmed that NOCH images accurately reproduce nuclear morphometric features across different cancer stages. Key diagnostic features, such as nuclear morphology, size, and nuclear-cytoplasmic contrast, are well preserved. NOCH models also demonstrate promising generalization when applied to other pathological tissues. The study unites label-free nonlinear optical imaging with histopathology using contrastive learning to establish stain-free computational histology. NOCH provides a rapid, non-invasive, and precise approach to surgical pathology, holding immense potential for revolutionizing cancer diagnosis and surgical interventions.
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  • 文章类型: Journal Article
    目的: 探讨无纺布和滤纸“三明治”固定法对小鼠结直肠病理切片质量和黏膜下层结构完整性的影响。 方法: 分别采用“三明治”法和常规方法固定脱水包埋小鼠结直肠样本,并制作病理切片进行比较。HE染色评估病理切片的肌层分离情况并统计不分离率;通过免疫组织化学法标记淋巴管(LYVE-1)和血管(CD31),分析两组病理切片黏膜下层结构的完整性。 结果: HE染色显示“三明治”组的小鼠结直肠病理切片少见肌层分离情况,而常规方法组切片普遍存在肌层分离;不分离率统计分析发现,“三明治”组不分离率(85.3%)高于常规方法组(21.1%,P<0.01);免疫组织化学结果显示,“三明治”组切片黏膜下层多见完整的淋巴管和血管结构,而常规方法组较为少见;统计分析发现“三明治”组的黏膜下层完整淋巴管和血管的数量分别为(99.3±10.1)和(72.7±8.1);高于常规方法组淋巴管(12.7±2.5,P<0.01)和血管数量(15.9±3.2,P<0.01)。 结论: “三明治”固定法脱水包埋可显著提升小鼠结直肠病理切片的不分离率,有效改善肌层分离问题并保护黏膜下层结构的完整性。.
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  • 文章类型: Meta-Analysis
    背景:我们进行了此网络荟萃分析,以全面比较不同节段的功效[中间节段(IS),短节段(SS)和长节段(LS)]在胸腰椎骨折的固定中。
    方法:我们通过PubMed搜索了从开始到2023年1月20日的研究,Embase,WebofScience,还有Cochrane图书馆.该荟萃分析包括比较胸腰椎骨折不同节段固定的所有研究。结果是前椎体高度比(AVHR),矢状Cobb角(SCA),视觉模拟量表评分,和植入物故障率。该网络荟萃分析由带有gemtc软件包的R软件进行。
    结果:最后,共有22项研究最终纳入本网络荟萃分析.就AVHR而言,IS(WMD2.43,95%CrI2.04-2.91)比SS更有效,差异有统计学意义。IS在降低SCA方面比LS更有效(WMD-2.87,95%CrI-3.79至-1.96),具有统计学意义。与SS相比,IS显著降低SCA,具有统计学意义(WMD-2.52,95%CrI-3.31至-1.72)。IS(WMD-2.87,95%CrI-3.78至-1.96)比LS更有效,差异有统计学意义。此外,IS(WMD-2.52,95%CrI-3.31至-1.72)比SS更有效,差异有统计学意义。
    结论:IS与SCA的显著减少有关,植入物故障率,与SS和LS相比,视觉模拟量表,在所有评估的治疗中,对AVHR的影响最有利。
    BACKGROUND: We did this network meta-analysis to comprehensively compare the efficacy of different segments [intermediate segment (IS), short segment (SS) and long segment (LS)] in the fixation of thoracolumbar fractures.
    METHODS: We searched studies from inception until January 20, 2023 through PubMed, Embase, Web of Science, and the Cochrane Library. All studies comparing different segments in the fixation of thoracolumbar fractures were included in this meta-analysis. Outcomes were anterior vertebral height ratio (AVHR), sagittal Cobb angle (SCA), visual analogue scale score, and implant failure rate. This network meta-analysis was performed by R software with gemtc package.
    RESULTS: Finally, a total of 22 studies were finally included in this network meta-analysis. IS (WMD 2.43, 95% CrI 2.04-2.91) was more effective than SS in terms of the AVHR, and the difference was statistically significant. IS was more effective than LS in reducing SCA (WMD -2.87, 95% CrI -3.79 to -1.96) with statistically significant. Compared with SS, IS significantly reduced the SCA with statistically significant (WMD -2.52, 95% CrI -3.31 to -1.72). IS (WMD -2.87, 95% CrI -3.78 to -1.96) was more effective than LS, and the difference was statistically significant. Moreover, IS (WMD -2.52, 95% CrI -3.31 to -1.72) was more effective than SS, and the difference was statistically significant.
    CONCLUSIONS: IS was associated with a significant reduction in SCA, implant failure rate, and visual analogue scale compared to SS and LS, while having the most favorable impact on AVHR among all the treatments assessed.
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  • 文章类型: Journal Article
    组织学或显微解剖学是在细胞水平上研究变唑生物中组织和器官的结构和功能的科学。根据定义,组织学依赖于各种显微镜技术,通常是光或最近虚拟的,以及电子显微镜。自两个多世纪前成立以来,组织学一直是生物医学教育的一个组成部分,特别是医疗,牙科,和兽医学生。传统上,组织学分为两个连续阶段,首先是对学习者的信息的教学传递,其次是学生培养分析显微照片的技能的实验室部分。在这一章中,作者提供了目前在全球不同地区如何教授组织学的概述.本概述还概述了使用哪些教育策略和技术,以及当地和文化环境如何影响不同国家和大陆的医学和其他学生的组织学教育。还讨论了改变该基础科学学科教学的当前趋势。
    Histology or microanatomy is the science of the structure and function of tissues and organs in metazoic organisms at the cellular level. By definition, histology is dependent on a variety of microscope techniques, usually light or more recently virtual, as well as electron microscopy. Since its inception more than two centuries ago, histology has been an integral component of biomedical education, specifically for medical, dental, and veterinary students. Traditionally, histology has been taught in two sequential phases, first a didactic transfer of information to learners and secondly a laboratory segment in which students develop the skill of analyzing micrographic images. In this chapter, the authors provide an overview of how histology is currently taught in different global regions. This overview also outlines which educational strategies and technologies are used, and how the local and cultural environment influences the histology education of medical and other students in different countries and continents. Also discussed are current trends that change the teaching of this basic science subject.
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  • 文章类型: Journal Article
    注意捕捉和脱离是涉及注意定向的不同过程。当前的大多数研究都通过操纵与积极(收益)或消极结果(损失)相关的刺激来检查注意力捕获或脱离的过程。然而,很少有研究调查注意力捕获和脱离是否受奖励和损失结果的调节.在目前的研究中,我们想研究积极或消极的结果是否可以调节注意力捕获和脱离的区分过程。这里,我们操纵了与奖励或损失结果相关的不同颜色的单例刺激;这些刺激要么出现在屏幕中心,要么出现在外围位置。参与者的任务是搜索目标并尽快确定目标中线段的方向。结果表明,人们很难脱离中央奖励分散者,与目标出现在外围位置时的损耗和中性干扰物相比。同样,在中央固定消失后,当目标出现在屏幕中央时,外围奖励干扰者比损失和中性干扰者获得更多的注意力。通过我们的发现,我们可以得出结论,积极的奖励可以增加注意力捕获和延迟注意力脱离在健康的人。
    Attentional capture and disengagement are distinct process involved in attentional orienting. Most current studies have examined either the process of attentional capture or disengagement by manipulating stimuli associated with either positive (gains) or negative outcomes (losses). However, few studies have investigated whether attentional capture and disengagement are modulated by reward and loss outcomes. In the current study, we want to examine whether positive or negative outcomes could modulate distinguishing process of attentional capture and disengagement. Here, we manipulated different colored singleton stimuli associated with reward or loss outcomes; these stimuli were either presented at the center of screen or at the peripheral location. The participants\' task was to search the target and identify the orientation of line segment in target as quickly as possible. The results showed that people had difficulty disengaging from a central reward-distractor, in comparison to loss- and neutral-distractor when target was presented at peripheral location. Similarly, peripheral reward-distractor captured more attention than loss- and neutral-distractor when target was presented at the center of screen after central fixation disappeared. Through our discoveries, we can conclude that positive rewards can increase attentional capture and delay attentional disengagement in healthy people.
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  • 文章类型: Journal Article
    荧光显微光学断层成像(fMOST)是一种介观水平的三维(3d)成像方法。可以以0.32×0.32×1.00μm3的高分辨率对小鼠的全脑进行成像。它有助于揭示完整器官组织的精细形态,即使是在整个小鼠大脑的不同脑区定位与复杂血管网络相连的单个血管。具有全脑跨尺度连接的3D可视化,fMOST具有破译大脑功能和疾病的巨大潜力。本文从fMOST技术的背景开始,包括广泛的3D成像方法比较和基本技术原理说明,其次是fMOST在脑血管研究中的应用以及适用于不同场景的相关血管标记技术。
    Fluorescence micro-optical sectioning tomography (fMOST) is a three-dimensional (3d) imaging method at the mesoscopic level. The whole-brain of mice can be imaged at a high resolution of 0.32 × 0.32 × 1.00 μm3. It is useful for revealing the fine morphology of intact organ tissue, even for positioning the single vessel connected with a complicated vascular network across different brain regions in the whole mouse brain. Featuring its 3d visualization of whole-brain cross-scale connections, fMOST has a vast potential to decipher brain function and diseases. This article begins with the background of fMOST technology including a widespread 3D imaging methods comparison and the basic technical principal illustration, followed by the application of fMOST in cerebrovascular research and relevant vascular labeling techniques applicable to different scenarios.
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  • 文章类型: Journal Article
    针灸已被证明是许多病理状况和功能障碍的有效临床治疗方法。然而,仍然缺乏关于穴位(AP)和经络的大量解剖学证据,因此,AP的位置相对主观,对针灸生物学机制的理解有限。所有这些问题都阻碍了针灸的临床应用和全球接受。我们的长期显微外科手术经验表明,穿孔皮血管(PCV)与AP高度相关,但解剖学证据不足。为了解决这种缺乏,使用先进的血管灌注固定方法解剖了两个新鲜的成人上肢标本,然后进行了检查。结果表明,上肢的30个五舒AP均具有相应的PCV。两个标本均显示AP和PCV之间的符合率为100%,表明PCV可能是AP的关键解剖特征。这项研究还为通过初步检测PCV客观定位AP提供了解剖学基础。这些发现可以使人们对针灸的机理和经络的本质有更好的理论理解。
    Acupuncture has been proven an effective clinical treatment for numerous pathological conditions and malfunctions. However, substantial anatomical evidence for acupuncture points (APs) and meridians is still lacking, so the location of APs is relatively subjective and understanding of the biological mechanisms of acupuncture is limited. All these problems hinder the clinical applications and worldwide acceptance of acupuncture. Our long-term microsurgery experience has indicated that Perforating Cutaneous Vessels (PCVs) are highly relevant to APs but the anatomical evidence is insufficient. To address this lack, two specimens of fresh adult human upper limbs were dissected using an advanced vascular perfusion-fixation method and then examined. The results show that all 30 five-Shu APs in the upper limbs have corresponding PCVs. Both specimens showed a 100% coincidence rate between APs and PCVs, indicating that PCVs could be critical anatomical features of APs. This study also provides an anatomical basis for locating APs objectively via preliminary detection of PCVs. The findings could lead to a better theoretical understanding of mechanisms of acupuncture and the essence of meridians.
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