背景:血浆外泌体microRNA被认为是疾病的潜在生物标志物。然而,Hirschsprung病(HSCR)中的外泌体microRNAs仍不清楚。在这项研究中,我们分析了HSCR的miRNA谱,并阐明了所选miR-199a-3p在HSCR发展中的作用机制。
方法:分离血浆外泌体,和外泌体miRNA高通量测序以获得差异表达的miRNA。CCK-8和Transwell分析用于确定差异表达最大的miRNA的功能。这在组织样本中得到证实。此后,通过数据库预测所选择的miRNA的靶基因。基因本体论(GO)分析,京都基因百科全书基因组(KEGG)分析,和可能的靶基因的蛋白质-蛋白质相互作用网络(PPI)的构建用于进行富集分析和相互作用。最后,PCR,Westernblot和Recovery实验证实靶基因的功能,哺乳动物雷帕霉素靶蛋白(mTOR),在体外。
结果:HSCR患者血浆外泌体和结肠病变组织中miR-199a-3p的表达上调。体外,miR-199a-3p可抑制细胞增殖和迁移。生物信息学分析表明,mTOR可能是miR-199a-3p在HSCR中的潜在靶标。发现mTOR在体外被miR-199a-3p下调。在组织样品中证实了mTOR和miR-199a-3p之间的负连接。mTOR在体外可以部分逆转miR-199a-3p对细胞增殖和迁移功能的影响。
结论:miR-199a-3p抑制细胞生长和运动,部分是通过瞄准mTOR。血浆外泌体miR-199a-3p,诊断标记,对于HSCR的发展至关重要。
BACKGROUND: Plasma exosomal microRNAs have been suggested to be potential biomarkers of disease. However, the exosomal microRNAs in Hirschsprung\'s disease (HSCR) are still unclear. In this study, we analyzed the miRNA profiles of HSCR and elucidated the mechanism of the selected miR-199a-3p in the development of HSCR.
METHODS: Plasma exosomes were isolated, and exosomal miRNA high-throughput sequencing was performed to obtain differentially expressed miRNAs. CCK-8 and Transwell assay were used to determine the function of the most differentially expressed miRNA, which was confirmed in tissue specimen. Thereafter, target genes of the selected miRNAs were predicted by the databases. Gene Ontology (GO) analysis, Kyoto Encyclopedia of Genes Genomes (KEGG) analysis, and protein-protein interaction network (PPI) construction of possible target genes were used to perform enrichment analysis and interaction. Finally, the PCR, Western blot and recovery experiment were used to confirm the function of target gene, mammalian target of rapamycin (mTOR), in vitro.
RESULTS: The expression of miR-199a-3p was upregulated in plasma exosomes and diseased colonic tissues of patients with HSCR. In vitro, miR-199a-3p can inhibit cell proliferation and migration. Bioinformatic analysis suggested that mTOR might be a potential target of miR-199a-3p in HSCR. mTOR was discovered to be downregulated by miR-199a-3p in vitro. The negative connection between mTOR and miR-199a-3p was confirmed in tissue samples. mTOR can partially reverse the effect of miR-199a-3p on cell proliferation and migration function in vitro.
CONCLUSIONS: miR-199a-3p suppresses cell growth and motility, partially by targeting mTOR. Plasma exosomal miR-199a-3p, a diagnostic marker, is crucial for the development of HSCR.