Antigen binding

抗原结合
  • 文章类型: Journal Article
    免疫球蛋白(Ig)已被广泛认为仅由B谱系细胞产生。然而,越来越多的证据表明Ig在一系列癌细胞中的表达,以及包括上皮细胞在内的正常细胞,表皮细胞,系膜细胞,单核细胞,和中性粒细胞。甚至已经发现Ig在非B细胞中在免疫特权位点如神经元和生精细胞中表达。尽管这些非B细胞衍生的Ig(非B-Ig)与常规Ig(B-Ig)共享相同的对称结构,进一步的研究揭示了非B-Ig的独特特征,如限制性可变区和异常糖基化。此外,非B-Ig表现出促进癌细胞恶性行为的特性,因此,它可以在临床上用作潜在的治疗生物标志物或靶标。非B-Ig的产生和调节的阐明肯定会扩大我们对免疫学的理解。
    Immunoglobulin (Ig) has been widely acknowledged to be produced solely by B-lineage cells. However, growing evidence has demonstrated the expression of Ig in an array of cancer cells, as well as normal cells including epithelial cells, epidermal cells, mesangial cells, monocytes, and neutrophils. Ig has even been found to be expressed in non-B cells at immune-privileged sites such as neurons and spermatogenic cells. Despite these non-B cell-derived Igs (non-B-Igs) sharing the same symmetric structures with conventional Igs (B-Igs), further studies have revealed unique characteristics of non-B-Ig, such as restricted variable region and aberrant glycosylation. Moreover, non-B-Ig exhibits properties of promoting malignant behaviours of cancer cells, therefore it could be utilised in the clinic as a potential therapeutic biomarker or target. The elucidation of the generation and regulation of non-B-Ig will certainly broaden our understanding of immunology.
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  • 文章类型: Journal Article
    在过去的十年里,马尔可夫状态模型(MSM)已经成为强大的方法,可以在从分子动力学轨迹获得的结构上建立动力学的离散模型。MSM的宏观状态的识别是影响MSM的质量的中心决策,但取决于所选择的结构表示和在特征化结构上利用的聚类算法两者。受到处于自由和束缚状态的大分子系统的激励,本文研究了两个研究方向,进一步降低非参数中的表示维数,数据驱动的方式,并在计算中包含更多的结构。在比较设置中通过各种统计测试对获得的MSM的质量进行严格评估,这牢固地表明,更少的尺寸和更多的结构会导致更好的MSM。许多有趣的发现来自最好的MSM,提高我们对抗体动力学和抗体-抗原识别之间关系的理解。
    Over the past decade, Markov State Models (MSM) have emerged as powerful methodologies to build discrete models of dynamics over structures obtained from Molecular Dynamics trajectories. The identification of macrostates for the MSM is a central decision that impacts the quality of the MSM but depends on both the selected representation of a structure and the clustering algorithm utilized over the featurized structures. Motivated by a large molecular system in its free and bound state, this paper investigates two directions of research, further reducing the representation dimensionality in a non-parametric, data-driven manner and including more structures in the computation. Rigorous evaluation of the quality of obtained MSMs via various statistical tests in a comparative setting firmly shows that fewer dimensions and more structures result in a better MSM. Many interesting findings emerge from the best MSM, advancing our understanding of the relationship between antibody dynamics and antibody-antigen recognition.
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  • 文章类型: Journal Article
    黄曲霉毒素B1(AFB1),一种剧毒的霉菌毒素,总是被各种农产品污染。骆驼可变结构域的重链抗体(VHH)是免疫测定中值得注意的试剂,由于其优良的特点。骆驼动物的免疫是产生VHH的简单策略。在这项研究中,为了避免对大型动物的依赖,骆驼,基于鼠VH和骆驼VHH之间的身份,体外制备了针对AFB1的鼠抗体(cVHs),然后开发了AFB1的免疫测定法。通过替换框架区2(FR2)(cVH-FR2)中的保守疏水残基,选择鼠抗AFB1VH片段(VH-2E6)进行骆驼化,FR4区103位的点突变(cVH-103),和具有高AFB1亲和力VHH(cVH-Nb26)的CDR3接枝。cVH-Nb26作为从大肠杆菌表达的重折叠蛋白具有5mg/L的产量和从巴斯德毕赤酵母表达的10mg/L的产量。与抗AFB1单链片段可变(scFv)2E6相比,cVH-Nb26增强了AFB1结合相互作用的20倍以上。虽然cVH-Nb26的AFB1亲和力不能满足本形式的应用要求,本研究为体外制备骆驼化抗体提供了有效的策略,这可能是一种有前途的AFB1检测免疫试剂。
    Aflatoxin B1 (AFB1), a highly toxic mycotoxin, always contaminated in a variety of agricultural products. Camelid variable domain of heavy chain antibody (VHH) is a noteworthy reagent in immunoassay, owing to its excellent characteristics. Immunization of camelid animals is a straightforward strategy to produce VHHs. In this study, to avoid the dependence on the large animals, the camelized, murine antibody (cVHs) against AFB1 was prepared in vitro based on the identities between murine VH and camelid VHH and then to develop an immunoassay for AFB1. A murine anti-AFB1 VH fragment (VH-2E6) was selected for camelization through replacement of conserved hydrophobic residues in framework region 2 (FR2) (cVH-FR2), point mutation at position 103 in the FR4 region (cVH-103), and CDR3-grafted with a high AFB1-affinity VHH (cVH-Nb26). The cVH-Nb26 had a yield of 5 mg/L as refolded protein expressed from Escherichia coli and 10 mg/L expressed from Pichia pastoris. Compared with anti-AFB1 single-chain fragment variable (scFv) 2E6, cVH-Nb26 performed more than 20-fold enhancement of AFB1-binding interactions. Although the AFB1-affinity of cVH-Nb26 cannot meet the application requirement in the present form, our study provides effective strategies for preparation of camelized antibody in vitro, which could be a promising immunoreagent for AFB1 detection.
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  • 文章类型: Journal Article
    IgG molecules exert important effector functions including complement-dependent cytotoxicity (CDC). Different IgG isotypes induce CDC effect with variation, largely due to their differential binding to C1q, the initiating molecule of the classical CDC pathway. Here we report a method to characterize the binding of IgG to C1q using label-free technique. With this method, we determined the binding affinities of multiple IgG1, IgG2 and IgG4 antibodies to C1q. To explore whether antigen binding to antibodies affects C1q binding, we assessed the binding of Trastuzumab and Adalimumab with bound antigen proteins to C1q. The results showed that although the two tested IgG1 mAbs alone bind C1q similarly, their FC binding to C1q was significantly impacted by antigen binding to the Fab. The data suggested that the first step of complement pathway, whether C1q binds target cell bound antibody molecules, may significantly affect the CDC activities of antibody drugs.
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  • 文章类型: Review
    The recent discoveries of broadly potent neutralizing human monoclonal antibodies represent a new generation of antiretrovirals for the treatment and prophylaxis. Antibodies are generally considered more effective and safer and have been proved to provide passive protection against mucosal challenge in humanized mice and macaques. Several neutralizing Abs could protect animals against HIV-1 but are not effective when used in an established infected model for therapy. In order to overcome the limitation of antiviral activities, multiple antibody-engineering technologies have been explored to generate \"the better\" neutralizing antibodies against HIV-1 since bNAbs attack viral entry by various mechanisms. Thus, a promising direction of research is to discover and exploit rational antibody combination or engineered antibodies (eAbs) as potential candidate therapeutics against HIV-1. It has been reported that inclusion of fusion-neutralizing antibodies in a set of bNAbs could improve their overall activities and neutralizing spectrum. Here, we review several routes for engineering bNAbs, such as design and generation of bispecific antibodies, specific glycosylation of antibodies to enhance antiviral activity, and variable region-specific modification guided by structure and computer, as well as reviewing antibody-delivery technologies by non-viral vector, viral vector, and human hematopoietic stem/progenitor cells transduced with a lentiviral construct. We also discuss the optimized antiviral activities and benefits of these strategy and potential mechanisms.
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  • 文章类型: Journal Article
    Aluminum salts such as aluminum oxyhydroxide and aluminum hydroxyphosphate are commonly used human vaccine adjuvants. In an effort to improve the adjuvant activity of aluminum salts, we previously showed that the adjuvant activity of aluminum oxyhydroxide nanoparticles is significantly more potent than that of aluminum oxyhydroxide microparticles. The present study was designed to (i) understand the mechanism underlying the potent adjuvant activity of aluminum oxyhydroxide nanoparticles, relative to microparticles, and (ii) to test whether aluminum hydroxyphosphate nanoparticles have a more potent adjuvant activity than aluminum hydroxyphosphate microparticles as well. In human THP-1 myeloid cells, wild-type and NLRP3-deficient, both aluminum oxyhydroxide nanoparticles and microparticles stimulate the secretion of proinflammatory cytokine IL-1β by activating NLRP3 inflammasome, although aluminum oxyhydroxide nanoparticles are more potent than microparticles, likely related to the higher uptake of the nanoparticles by the THP-1 cells than the microparticles. Aluminum hydroxyphosphate nanoparticles also have a more potent adjuvant activity than microparticles in helping a model antigen lysozyme to stimulate specific antibody response, again likely related to their stronger ability to activate the NLRP3 inflammasome.
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