molecular cytopathology

分子细胞病理学
  • 文章类型: Journal Article
    随着越来越多的预测生物标志物需要管理非小细胞肺癌(NSCLC)患者,诊断样本的护理和处理发生了范式转变。在各种测试方法中,免疫组织化学(IHC)是最具成本效益和广泛可用的。此外,在过去的十年中,免疫疗法已成为最有前途的癌症治疗方法之一。在这种情况下,IHC是PDL-1/PD1免疫疗法最常用的测试方法。针对程序性死亡1(PD-1)/程序性死亡配体1(PD-L1)途径的几种单克隆抗体已被整合到多种癌症类型的标准治疗中。曾经通过免疫组织化学(IHC)提供了肿瘤细胞中PD-L1表达的证据。由于目前可用的PD-L1测定已经在福尔马林固定石蜡包埋(FFPE)组织学标本上开发,越来越多的研究致力于证实将PDL-1分析也应用于细胞学样本的可行性。尽管已经报道了有希望的结果,一些重要问题仍然需要解决。其中包括细胞学样本的类型,分析前的问题,细胞组织学相关性,和观察员之间的协议。这篇综述简要总结了细胞病理学在通过免疫细胞化学(ICC)分析PD-L1中的作用以及免疫治疗环境中细胞病理学的未来方向的知识。
    With a growing number of predictive biomarkers needed to manage patients with non-small cell lung cancer (NSCLC), there has been a paradigm shift in care and handling of diagnostic samples. Among the various testing methods, immunohistochemistry (IHC) is the most cost- effective and widely available. Furthermore, over the past decade immunotherapy has emerged as one of the most promising cancer treatments. In this scenario IHC is the most used testing method available for PDL-1/PD1 immunotherapy. Several monoclonal antibodies targeting programmed death 1 (PD-1)/programmed death ligand-1 (PD-L1) pathways have been integrated into standard-of-care treatments of a wide range of cancer types, once provided evidence of PD-L1 expression in tumor cells by immunohistochemistry (IHC). Since currently available PD-L1 assays have been developed on formalin-fixed paraffin embedded (FFPE) histological specimens, a growing body of research is being dedicated to confirm the feasibility of applying PDL-1 assays also to cytological samples. Albeit promising results have been reported, several important issues still need to be addressed. Among these are the type of cytological samples, pre-analytical issues, cyto-histological correlation, and inter-observer agreement. This review briefly summarizes the knowledge of the role of cytopathology in the analysis of PD-L1 by immunocytochemistry (ICC) and future directions of cytopathology in the immunotherapy setting.
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  • 文章类型: Journal Article
    This short article describes the method of digital cytopathology using Z-stack scanning with or without extended focusing. This technology is suitable to observe such thick clusters as adenocarcinoma on cytologic specimens. Artificial intelligence (AI) has been applied to histological images, but its application on cytologic images is still limited. This article describes our attempt to apply AI technology to cytologic digital images. For molecular analysis, cytologic materials, such as smear, LBC, and cell blocks, have been successfully used for targeted single gene detection and multiplex gene analysis with next-generation sequencing. As a future perspective, the system can be connected to full automation by combining digital cytopathology with AI application to detect target cancer cells and to perform molecular analysis. The literature review is updated according to the subjects.
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  • 文章类型: Journal Article
    近年来,细胞病理学已确立为一种独立的诊断模式,可指导许多不同环境下的临床治疗.将分子技术应用于细胞学样品以鉴定预后和预测性生物标志物在实现这一目标方面发挥了关键作用。虽然早期的研究表明,单一的生物标志物检测是可行的细胞学样品,目前,在需要越来越多的生物标志物来指导患者护理的时代,这仅提供了有限且日益不足的信息.最近,多基因突变分析,例如下一代测序(NGS),因为它们能够提供关于多个基因的基因组信息而受到欢迎。细胞病理学家通过影响分析前步骤,在确保细胞学样品中NGS的成功方面发挥着关键作用。根据细胞数量和肿瘤分数优化制剂类型和充足性要求,并确保DNA输入要求的最佳核酸提取。在毕尔巴鄂举行的第30届欧洲病理学研讨会上,讨论了NGS在全民医疗保健(UHC)欧洲环境中分子细胞病理学中的作用和潜力的一般原则以及主要临床应用的例子。欧洲病理学会,其内容在这里全面描述。
    In recent years, cytopathology has established itself as an independent diagnostic modality to guide clinical management in many different settings. The application of molecular techniques to cytological samples to identify prognostic and predictive biomarkers has played a crucial role in achieving this goal. While earlier studies have demonstrated that single biomarker testing is feasible on cytological samples, currently, this provides only limited and increasingly insufficient information in an era where an increasing number of biomarkers are required to guide patient care. More recently, multigene mutational assays, such as next-generation sequencing (NGS), have gained popularity because of their ability to provide genomic information on multiple genes. The cytopathologist plays a key role in ensuring success of NGS in cytological samples by influencing the pre-analytical steps, optimizing preparation types and adequacy requirement in terms of cellularity and tumor fraction, and ensuring optimal nucleic acid extraction for DNA input requirements. General principles of the role and potential of NGS in molecular cytopathology in the universal healthcare (UHC) European environment and examples of principal clinical applications were discussed in the workshop that took place at the 30th European Congress of Pathology in Bilbao, European Society of Pathology, whose content is here comprehensively described.
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  • 文章类型: Journal Article
    微创手术,如支气管内超声引导下经支气管针吸活检术(EBUS-TBNA),不仅要获得高质量和高质量的材料进行形态学评估,但也有足够的样本分析分子标记,以指导患者进行适当的靶向治疗。在这种情况下,世界各地的细胞病理学家应该熟悉对检测细胞学样本的最低要求。本手稿是对题为“分子分析的细胞学准备:EBUSTBNA的分析前问题”的研讨会内容的全面描述。在利物浦举行的第40届欧洲细胞病理学大会上,英国。本综述强调了用于分子分析的不同类型的细胞学基质的优点和局限性,如档案涂片,液基制剂,档案cytospin制剂和FTA(弗林德斯技术协会)卡,以及他们的技术要求/特点。这些各种类型的细胞学标本可以成功地用于广泛的分子研究,但提取的核酸的质量和数量直接依赖于这些样品的充分的分析前评估。在此设置中,细胞病理学家不仅必须熟悉不同类型的标本和相关的技术程序,而且还要正确处理微创手术提供的材料,确保有足够的材料用于通过个性化护理对患者进行精确诊断和正确管理。
    Minimally invasive procedures such as endobronchial ultrasound-guided transbronchial needle aspiration (EBUS-TBNA) must yield not only good quality and quantity of material for morphological assessment, but also an adequate sample for analysis of molecular markers to guide patients to appropriate targeted therapies. In this context, cytopathologists worldwide should be familiar with minimum requirements for refereeing cytological samples for testing. The present manuscript is a review with comprehensive description of the content of the workshop entitled Cytological preparations for molecular analysis: pre-analytical issues for EBUS TBNA, presented at the 40th European Congress of Cytopathology in Liverpool, UK. The present review emphasises the advantages and limitations of different types of cytology substrates used for molecular analysis such as archival smears, liquid-based preparations, archival cytospin preparations and FTA (Flinders Technology Associates) cards, as well as their technical requirements/features. These various types of cytological specimens can be successfully used for an extensive array of molecular studies, but the quality and quantity of extracted nucleic acids rely directly on adequate pre-analytical assessment of those samples. In this setting, cytopathologists must not only be familiar with the different types of specimens and associated technical procedures, but also correctly handle the material provided by minimally invasive procedures, ensuring that there is sufficient amount of material for a precise diagnosis and correct management of the patient through personalised care.
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  • 文章类型: Comparative Study
    The results from molecular assays can be affected significantly by the preanalytic condition of cytologic samples. The authors review current knowledge on the use of cytologic samples for epidermal growth factor receptor (EGFR) mutation testing in non-small cell lung cancer with a focus on preanalytic parameters. A systematic electronic search of the MEDLINE database was performed to identify original articles that reported the use of cytologic samples for EGFR molecular analysis and included a minimum of 100 samples. The information collected included author(s), journal, and year of publication; number of patients and samples; sampling method; type of preparation; type of fixative; staining techniques; mutation analysis techniques; tumor cellularity; the percentage of tumor cells; data on DNA quantity, quality, and concentration; failed assays; and the mutation rate. EGFR mutation analysis was conducted on 4999 cytologic samples from 22 studies that fulfilled the inclusion criteria. Fine-needle aspirates and pleural effusions were the most common types of specimens used. DNA was mainly extracted from cell blocks and smears, and the most commonly reported fixatives included formalin, ethanol, and CytoLyt. Cellularity assessments and DNA yields were available from 5 studies each. The average success rate for the assays that used cytologic specimens was 95.87% (range, 85.2%-100%). The mutation rate ranged from 6% to 50.46%, and a higher mutation detection rate and lower numbers of insufficient cases were reported for pleural effusions and lymph node samples from endobronchial ultrasound-guided transbronchial needle aspiration compared with histologic specimens. Low cellularity and a low percentage of tumor cells were associated with higher test failure rates. Future guidelines should consider the current data for specific recommendations regarding cytologic samples.
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