minigene

minigene
  • 文章类型: Journal Article
    背景:遗传性球形红细胞增多症(HS,MIM#612641)是最常见的遗传性溶血性疾病之一。本研究旨在证实一种新的变异体的致病性,并揭示患者的遗传病因。
    方法:回顾性分析1例在重庆医科大学附属儿童医院进行基因测序的HS患者的临床资料。然后对检测到的变体进行计算机预测和体外小基因剪接报告系统以分析其分子内影响。还提供了与由于SPTB基因变体引起的HS相关的文献的总结。
    结果:在先证中鉴定了SPTB基因(NM_001024858.4)中的新变体(c.301-2A>G)。使用Sanger测序,我们最终证实,该变体的遗传不能追溯到亲生父母。体外小基因测定揭示了来自c.301-2A>G变体的三种不同转录本:r.301_474del,r.301_306delCCAAAAG,和r.301-1_301-57ins。通过文献综述,我们总结了已进行基因型验证的HS患者,并绘制了SPTB基因变异图谱.
    结论:我们确定了SPTB基因的剪接变体,从而证实了其反常的翻译。新的变异是HS先证者的可能遗传病因。我们的发现扩展了SPTB基因的变异谱,从而从临床和分子角度提高对相关遗传性溶血性疾病的认识,为遗传咨询和诊断奠定基础。
    BACKGROUND: Hereditary spherocytosis (HS, MIM#612641) is one of the most common hereditary hemolytic disorders. This study aimed to confirm a novel variant\'s pathogenicity and reveal a patient\'s genetic etiology.
    METHODS: The clinical data of a patient with HS who underwent genetic sequencing at the Children\'s Hospital of Chongqing Medical University were reviewed retrospectively. In silico prediction and in vitro minigene splicing reporter system were then conducted on the detected variant to analyze its intramolecular impact. A summary of the literature related to HS due to SPTB gene variants was also presented.
    RESULTS: A novel variant (c.301-2 A > G) in the SPTB gene (NM_001024858.4) was identified in the proband. Using Sanger sequencing, we conclusively confirmed that the inheritance of the variant could not be traced to the biological parents. The in vitro minigene assay revealed three different transcripts derived from the c.301-2 A > G variant: r.301_474del, r.301_306delCCAAAG, and r.301-1_301-57ins. Through a literature review, patients with HS who had been genotypically validated were summarized and the SPTB gene variant profile was mapped.
    CONCLUSIONS: We identified a splicing variant of the SPTB gene, thus confirming its aberrant translation. The novel variant was the probable genetic etiology of the proband with HS. Our findings expanded the variant spectrum of the SPTB gene, thus improving the understanding of the associated hereditary hemolytic disorders from a clinical and molecular perspective and contributing to the foundation of genetic counseling and diagnosis.
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  • 文章类型: Journal Article
    遗传性痉挛性截瘫(HSP)是一组遗传性神经退行性疾病,其特征在于双侧下肢存在进行性痉挛和无力。由内质网脂筏相关1(ERLIN1)基因突变引起的痉挛性截瘫62(SPG62)是HSP的一种罕见亚型。在这里,我们报道了首例中国SPG62患者,探讨可能的致病机制,并对ERLIN1相关HSP患者进行综述。一名23岁的男子在行走和步态异常方面有进行性困难超过11年。体格检查显示下肢肌肉力量(5-/5)略有降低,肌肉张力升高,四肢反射亢进。遗传分析在ERLIN1基因中发现了一个新的剪接位点突变(c.504+1G>A),生物信息学工具预测这会干扰mRNA的正常剪接过程。Minigene实验进一步证实突变c.504+1G>A可能导致mRNA中外显子7的错误缺失,这可能会改变erlin-1的保守抑制素(PHB)结构域并影响erlin1/2复合物的功能。因此,我们确定了一个引起延迟发作的纯HSP的ERLIN1剪接位点的致病突变。本研讨拓宽了SPG62的遗传和表型谱。
    Hereditary spastic paraplegia (HSP) is a group of genetic neurodegenerative disorders, which is characterized by the presence of progressive spasticity and weakness in bilateral lower limbs. Spastic paraplegia 62 (SPG62) caused by the endoplasmic reticulum lipid raft associated 1 (ERLIN1) gene mutation is a rare subtype of HSP. Herein, we report the case of the first Chinese SPG62 patient, explore the potential pathogenic mechanism and review ERLIN1-related HSP patients. A 23-year-old man had progressive difficulty in walking and gait abnormalities for more than 11 years. Physical examination showed slightly reduced muscle strength (5-/5) and elevated muscle tone in the lower limbs and hyperreflexia in four limbs. Genetic analysis identified a novel splicing site mutation in ERLIN1 gene (c.504+1G > A), which was predicted to disturb the normal splicing process of mRNA by bioinformatic tools. Minigene experiment further confirmed the mutation c.504+1G > A could cause erroneous deletion of Exon 7 in the mRNA, which may change the conserved prohibitin (PHB) domain of erlin-1 and affect the function of erlin1/2 complex. Thus, we identified a pathogenic mutation of ERLIN1 splicing site causing delayed-onset pure HSP. This study widened the genetic and phenotypic spectrum of SPG62.
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