mendelian randomization

孟德尔随机化
  • 文章类型: Journal Article
    目的:线粒体功能障碍与骨关节炎(OA)之间的关系一直在研究,然而,他们的遗传关联仍然模糊。在这项研究中,线粒体相关基因被用作工具变量来替代线粒体功能障碍,和膝关节OA(KOA)的汇总数据被用作结果以检查其遗传关联。
    方法:我们从人类MitoCarta3.0数据库中获得了1136个线粒体相关基因。来自相应基因表达(n=31,684)和蛋白质(n=35,559)数量性状基因座(eQTLs和pQTLs)研究的线粒体相关基因的遗传代理仪器,分别。从最大的OA全基因组关联研究(GWAS)中提取了KOA的汇总数据(62,497例KOA病例和333,557例对照)。我们将QTL数据与KOAGWAS数据进行整合,以使用基于汇总数据的孟德尔随机分析(SMR)评估其遗传关联。此外,我们实施了贝叶斯共定位分析,以揭示暗示性线粒体相关基因和KOA是否由同一遗传变异驱动.最后,为了验证主要发现,进行了复制研究(24,955例和378,169例对照)和基于多SNP的SMR(SMR-multi)测试。
    结果:通过SMR分析,我们发现2个线粒体相关基因的表达水平与KOA风险相关.具体来说,IMMP2L的基因表达水平升高(比值比[OR]=1.056;95%置信区间[CI]=1.030-1.082;P-FDR=0.004)会增加KOA的风险.相反,AKAP10基因表达水平升高可降低KOA风险(OR=0.955;95%CI,0.934-0.977;P-FDR=0.019).共定位分析表明AKAP10(PP。H4=0.84)和IMMP2L(PP。H4=0.91)与KOA具有相同的遗传变异。此外,在复制研究和SMR多检验中发现了一致的结果,进一步证明了我们研究结果的可靠性。
    结论:总之,我们的分析揭示了线粒体相关基因所代理的线粒体功能障碍与KOA之间的遗传关联,为KOA的潜在发病机制提供新的见解。此外,这些确定的候选基因为KOA的临床药物靶标开发提供了可能性.关键点•这是第一个SMR研究,旨在探索线粒体相关基因代理的线粒体功能障碍与KOA之间的遗传关联。•充分的证据支持AKAP10和IMMP2L表达水平之间的遗传关联,我们的MR分析可能为KOA的潜在发病机制提供新的见解。•这些鉴定的候选基因为KOA的临床药物靶标开发提供了可能性。
    OBJECTIVE: Association between mitochondrial dysfunction and osteoarthritis (OA) has been consistently investigated, yet their genetic association remains obscure. In this study, mitochondrial-related genes were used as instrumental variables to proxy for mitochondrial dysfunction, and summary data of knee OA (KOA) were used as outcome to examine their genetic association.
    METHODS: We obtained 1136 mitochondrial-related genes from the human MitoCarta3.0 database. Genetic proxy instruments for mitochondrial-related genes from studies of corresponding gene expression (n = 31,684) and protein (n = 35,559) quantitative trait locus (eQTLs and pQTLs), respectively. Aggregated data for KOA (62,497 KOA cases and 333,557 controls) were extracted from the largest OA genome-wide association study (GWAS). We integrated QTL data with KOA GWAS data to estimate their genetic association using summary data-based Mendelian randomization analysis (SMR). Additionally, we implemented Bayesian colocalization analysis to reveal whether suggestive mitochondrial-related genes and KOA were driven by a same genetic variant. Finally, to validate the primary findings, replication study (24,955 cases and 378,169 controls) and multi-SNP-based SMR (SMR-multi) test was performed.
    RESULTS: Through SMR analysis, we found that the expression levels of 2 mitochondrial-related genes were associated with KOA risk. Specifically, elevated gene expression levels of the IMMP2L (odds ratio [OR] = 1.056; 95% confidence interval [CI] = 1.030-1.082; P-FDR = 0.004) increased the risk of KOA. Conversely, increased gene expression levels of AKAP10 decreased the risk of KOA (OR = 0.955; 95% CI, 0.934-0.977; P-FDR = 0.019). Colocalization analysis demonstrated that AKAP10 (PP.H4 = 0.84) and IMMP2L (PP.H4 = 0.91) shared the same genetic variant with KOA. In addition, consistent results were found in replication study and SMR-multi test, further demonstrating the reliability of our findings.
    CONCLUSIONS: In summary, our analyses revealed the genetic association between mitochondrial dysfunction proxied by mitochondrial-related genes and KOA, providing new insight into potential pathogenesis of KOA. Furthermore, these identified candidate genes offer the possibility of clinical drug target development for KOA. Key points • This is the first SMR study to explore the genetic association between mitochondrial dysfunction proxied by mitochondrial-related genes and KOA. • Sufficient evidence to support genetic association between the expression levels of AKAP10 and IMMP2L, and KOA • Our MR analysis may provide novel new insight into potential pathogenesis of KOA. • These identified candidate genes offer the possibility of clinical drug target development for KOA.
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  • 文章类型: Journal Article
    背景:先前的观察性研究揭示了虚弱和下腰痛(LBP)之间潜在的稳固的双向关系。然而,确切的因果关系尚不清楚.
    方法:为了检查虚弱与LBP之间的潜在因果关系,我们进行了双向双样本孟德尔随机化分析(MR)研究.有关虚弱指数(FI)和LBP的遗传数据来自公开的全基因组关联研究(GWAS)。利用了各种MR方法,例如方差逆加权(IVW),加权中位数,和MR-Egger,评估因果关系。此外,我们进行了敏感性分析,以评估结果的稳健性.
    结果:遗传预测高FI(IVW,比值比[OR]=1.66,95%CI1.17-2.36,p=4.92E-03)与较高的LBP风险相关。至于相反的方向,LBP的遗传倾向与较高的FI(IVW,OR=1.13,95%CI1.07-1.19,p=2.67E-05)。各种MR技术和敏感性分析的结果表明了我们研究结果的稳健性。
    结论:我们的研究结果提供了额外的证据来支持虚弱与LBP之间的双向因果关系。
    BACKGROUND: Previous observational studies have revealed a potentially robust bidirectional relationship between frailty and low back pain (LBP). However, the precise causal relationship remains unclear.
    METHODS: To examine the potential causal association between frailty and LBP, we conducted bidirectional two-sample Mendelian randomization analysis (MR) study. Genetic data on frailty index (FI) and LBP were acquired from publicly available genome-wide association studies (GWAS). Various MR methodologies were utilized, such as inverse variance weighting (IVW), weighted median, and MR-Egger, to evaluate causality. Additionally, sensitivity analyses were conducted to evaluate the robustness of the findings.
    RESULTS: Genetically predicted higher FI (IVW, odds ratio [OR] = 1.66, 95% CI 1.17-2.36, p = 4.92E-03) was associated with a higher risk of LBP. As for the reverse direction, genetic liability to LBP showed consistent associations with a higher FI (IVW, OR = 1.13, 95% CI 1.07-1.19, p = 2.67E-05). The outcomes from various MR techniques and sensitivity analyses indicate the robustness of our findings.
    CONCLUSIONS: Our research findings provide additional evidence bolstering the bidirectional causal relationship between frailty and LBP.
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  • 文章类型: Journal Article
    目的:新兴研究已经调查了几种可改变的危险因素对类风湿关节炎(RA)风险的潜在影响,但研究结果并不一致.本研究旨在使用孟德尔随机化(MR)方法全面探索可改变的危险因素与RA风险易感性之间的遗传因果关系。
    方法:从几个全基因组关联研究中,在全基因组显著性水平(p<5×10-8)上选择了可改变危险因素的遗传工具,分别。RA的汇总数据来自全面的荟萃分析。将可改变的危险因素与RA风险联系起来的因果估计是使用具有逆方差加权(IVW)的MR分析进行评估的。MR-Egger,加权,和加权中位数方法。
    结果:在多次测试的Bonferroni校正后,我们发现教育程度和RA之间存在因果关系,其中受教育程度(大学完成度)(比值比[OR]=0.50,95%CI=0.36,0.69,p=2.87E-05)和受教育程度(受教育年限)(OR=0.93,95%CI=0.90,0.96,p=4.18E-06)对RA风险较低有保护作用.然而,开始吸烟与RA风险增加相关(OR=1.27,95%CI=1.09,1.47,p=.002).此外,在可改变的危险因素和RA之间的因果推断过程中,没有遗传变异水平多效性的迹象.
    结论:我们的研究揭示了受教育程度和吸烟对RA风险的遗传因果影响,提示早期监测和识别可改变的危险因素有利于RA的预防性咨询/治疗策略.
    OBJECTIVE: Emerging research has investigated the potential impact of several modifiable risk factors on the risks of rheumatoid arthritis (RA), but the findings did not yield consistent results. This study aimed to comprehensively explore the genetic causality between modifiable risk factors and the susceptibility of RA risk using the Mendelian randomization (MR) approach.
    METHODS: Genetic instruments for modifiable risk factors were selected from several genome-wide association studies at the genome-wide significance level (p < 5 × 10-8), respectively. Summary-level data for RA were sourced from a comprehensive meta-analysis. The causal estimates linking modifiable risk factors to RA risk were assessed using MR analysis with inverse variance weighting (IVW), MR-Egger, weighted, and weighted median methods.
    RESULTS: After Bonferroni correction for multiple tests, we found the presence of causality between educational attainment and RA, where there were protective effects of educational attainment (college completion) (odds ratio [OR] = 0.50, 95% CI = 0.36, 0.69, p = 2.87E-05) and educational attainment (years of education) (OR = 0.93, 95% CI = 0.90, 0.96, p = 4.18E-06) on the lower RA risks. Nevertheless, smoking initiation was observed to be associated with increased RA risks (OR = 1.27, 95% CI = 1.09, 1.47, p = .002). Moreover, there was no indication of horizontal pleiotropy of genetic variants during causal inference between modifiable risk factors and RA.
    CONCLUSIONS: Our study reveals the genetic causal impacts of educational attainment and smoking on RA risks, suggesting that the early monitoring and recognition of modifiable risk factors would be beneficial for the preventive counseling/treatment strategies for RA.
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  • 文章类型: Journal Article
    背景:在许多观察性研究中,睡眠呼吸暂停(SA)与痴呆的风险增加有关;这是否是由神经退行性疾病驱动的,血管,或其他机制尚不清楚。我们试图检验SA之间的双向因果关系,阿尔茨海默病(AD),冠状动脉疾病(CAD),使用孟德尔随机化和缺血性卒中。
    结果:使用最近的4个汇总统计数据,SA的大型全基因组关联研究(n=523366),AD(n=94437),CAD(n=1165690),和冲程(n=1308460),我们进行了双向双样本孟德尔随机化分析.我们的主要分析方法是固定效应逆方差加权(IVW)孟德尔随机化;进行诊断测试和敏感性分析以验证结果的稳健性。我们确定了SA对CAD风险的显著因果影响(SA责任的比值比[ORIVW]=1.35每对数比值增加[95%CI=1.25-1.47])和卒中(ORIVW=1.13[95%CI=1.01-1.25])。排除与体重指数相关的单核苷酸多态性后,这些相关性有所减弱(对于CAD风险,ORIVW=1.26[95%CI=1.15-1.39];对于卒中风险,ORIVW=1.08[95%CI=0.96-1.22])。SA与AD的高风险无因果关系(ORIVW=1.14[95%CI=0.91-1.43])。我们没有发现AD的因果效应,CAD,或中风的风险SA。
    结论:这些结果表明SA增加了CAD的风险,确定的与卒中风险的因果关系可能与体重指数混淆。此外,未发现SA对AD风险的因果影响.未来的研究有必要调查睡眠障碍之间的心血管通路,包括SA,和痴呆症。
    BACKGROUND: Sleep apnea (SA) has been linked to an increased risk of dementia in numerous observational studies; whether this is driven by neurodegenerative, vascular, or other mechanisms is not clear. We sought to examine the bidirectional causal relationships between SA, Alzheimer disease (AD), coronary artery disease (CAD), and ischemic stroke using Mendelian randomization.
    RESULTS: Using summary statistics from 4 recent, large genome-wide association studies of SA (n=523 366), AD (n=94 437), CAD (n=1 165 690), and stroke (n=1 308 460), we conducted bidirectional 2-sample Mendelian randomization analyses. Our primary analytic method was fixed-effects inverse variance-weighted (IVW) Mendelian randomization; diagnostics tests and sensitivity analyses were conducted to verify the robustness of the results. We identified a significant causal effect of SA on the risk of CAD (odds ratio [ORIVW]=1.35 per log-odds increase in SA liability [95% CI=1.25-1.47]) and stroke (ORIVW=1.13 [95% CI=1.01-1.25]). These associations were somewhat attenuated after excluding single-nucleotide polymorphisms associated with body mass index (ORIVW=1.26 [95% CI=1.15-1.39] for CAD risk; ORIVW=1.08 [95% CI=0.96-1.22] for stroke risk). SA was not causally associated with a higher risk of AD (ORIVW=1.14 [95% CI=0.91-1.43]). We did not find causal effects of AD, CAD, or stroke on risk of SA.
    CONCLUSIONS: These results suggest that SA increased the risk of CAD, and the identified causal association with stroke risk may be confounded by body mass index. Moreover, no causal effect of SA on AD risk was found. Future studies are warranted to investigate cardiovascular pathways between sleep disorders, including SA, and dementia.
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  • 文章类型: Journal Article
    背景:在观察性研究中,血清皮质醇与卒中相关,但潜在的因果关系是不确定的。本研究通过孟德尔随机化研究,探讨了corin与卒中之间的因果关系。
    结果:在Gusu队列中,血清皮质素在基线时测定,并且在10年的随访中前瞻性地获得了卒中事件.通过MassArray对2310名参与者进行了CORIN单核苷酸多态性(SNP)的基因分型(平均年龄,53岁;39%的男性)。17个SNP通过了Hardy-Weinberg测试,被认为是潜在的工具。仅有1个SNP(rs2271037)确定血清corin的变异性与卒中显著相关,即使校正了常规危险因素(风险比[HR],1.36[95%CI,1.00-1.85])。从SNP-corin关联产生的加权遗传风险评分与卒中显著相关(HR,2.01[95%CI,1.15-3.51])。使用这个遗传风险评分作为工具,1个样本孟德尔随机化分析发现,每SD卒中的HR显著高于log2转化的corin(HR,1.37[95%CI,1.07-1.76])。基于SNP-corin和SNP-卒中关联的逆方差加权分析发现,卒中前SD较高log2转化的corin的HR为5.92(95%CI,2.23-15.72)。无论从仪器中移除单个SNP,效应估计保持一致。多个其他2个样本孟德尔随机化方法也证实了几乎相同的效应估计。
    结论:基因测定的血清皮质素浓度变化与中国成年人卒中风险显著相关。血清皮质素升高可能是中风的危险因素。
    BACKGROUND: Serum corin has been associated with stroke in observational studies, but the underlying causality is uncertain. This study examined the causal association between corin and stroke through Mendelian randomization study.
    RESULTS: In the Gusu cohort, serum corin was assayed at baseline, and stroke incidents were prospectively obtained during 10 years of follow-up. Single-nucleotide polymorphisms (SNPs) in CORIN were genotyped by MassArray for 2310 participants (mean age, 53 years; 39% men). Seventeen SNPs passed the Hardy-Weinberg test and were considered the potential instruments. Only 1 SNP (rs2271037) determined variability of serum corin was significantly associated with stroke even after adjusting for conventional risk factors (hazard ratio [HR], 1.36 [95% CI, 1.00-1.85]). The weighted genetic risk score generated from the SNP-corin associations was significantly associated with stroke (HR, 2.01 [95% CI, 1.15-3.51]). Using this genetic risk score as the instrument, 1-sample Mendelian randomization analysis found a significant HR of stroke per-SD higher log2-transformed corin (HR, 1.37 [95% CI, 1.07-1.76]). The inverse variance-weighted analysis based on the SNP-corin and SNP-stroke associations found that the HR of stroke pre-SD higher log2-transformed corin was 5.92 (95% CI, 2.23-15.72). The effect estimates stayed consistent regardless of an individual SNP being removed from the instruments. An almost identical effect estimate was also confirmed by multiple other 2-sample Mendelian randomization methods.
    CONCLUSIONS: Genetically determined variations of serum corin concentration were significantly associated with the risk of stroke in Chinese adults. Elevated serum corin may be a risk factor for stroke.
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  • 文章类型: Journal Article
    观察到肠道微生物组(GM)与先天性巨结肠病(HD)的发生率有关。然而,转基因在HD中的作用和机制尚不清楚。探讨GM与HD的关系及代谢产物作为介质的作用,我们进行了一项双向孟德尔二步骤随机化(MR)研究.
    该研究从汇总水平的全基因组关联研究(GWAS)中选择了仪器变量(IV)。MiBioGen联盟为通用汽车提供了GWAS数据,而代谢物和HD的GWAS数据是从GWAS目录联盟获得的。进行了两个样本的MR分析,以评估与GM和HD相关的IV之间的双向相关性。然后,选择与1,400个代谢物性状相关的遗传变异用于使用Product方法进行进一步的中介分析。
    这项研究发现,七属细菌与HD的发生率有显着的因果关系,但反之亦然。27个代谢产物性状与HD显著相关。在结合重大成果后,已经确定了三个重要的GM-代谢物-HD系。在肽球菌-硬脂酰鞘磷脂(d18:1/18:0)-HD系中,硬脂酰鞘磷脂(d18:1/18:0)水平的中介比例为14.5%,而在肽球菌-赖氨酸-HD系中,赖氨酸水平的中介比例为12.9%。此外,在Roseburia-X-21733-HD系列中,X-21733级别的调解比例为23.5%。
    我们的MR研究表明,通过硬脂酰鞘磷脂(d18:1/18:0)和赖氨酸的血清水平部分介导的肽球菌对HD风险的保护作用,和Roseburia对HD的风险影响部分由X-21733水平介导。这些发现可以作为HD的新型生物标志物和治疗靶标。
    UNASSIGNED: Gut microbiome (GM) was observed to be associated with the incidence of Hirschsprung disease (HD). However, the effect and mechanism of GM in HD is still unclear. To investigate the relationship between GM and HD and the effect of metabolites as mediators, a bidirectional two-step Mendelian randomization (MR) study was conducted.
    UNASSIGNED: The study selected instrument variables (IVs) from summary-level genome-wide association studies (GWAS). The MiBioGen consortium provided the GWAS data for GM, while the GWAS data for metabolites and HD were obtained from the GWAS Catalog consortium. Two-sample MR analyses were performed to estimate bidirectional correlations between IVs associated with GM and HD. Then, genetic variants related to 1,400 metabolite traits were selected for further mediation analyses using the Product method.
    UNASSIGNED: This study found that seven genus bacteria had a significant causal relationship with the incidence of HD but not vice versa. 27 metabolite traits were significantly correlated with HD. After combining the significant results, three significant GM-metabolites-HD lines have been identified. In the Peptococcus-Stearoyl sphingomyelin (d18:1/18:0)-HD line, the Stearoyl sphingomyelin (d18:1/18:0) levels showed a mediation proportion of 14.5%, while in the Peptococcus-lysine-HD line, the lysine levels had a mediation proportion of 12.9%. Additionally, in the Roseburia-X-21733-HD line, the X-21733 levels played a mediation proportion of 23.5%.
    UNASSIGNED: Our MR study indicates a protective effect of Peptococcus on HD risk that is partially mediated through serum levels of stearoyl sphingomyelin (d18:1/18:0) and lysine, and a risk effect of Roseburia on HD that is partially mediated by X-21733 levels. These findings could serve as novel biomarkers and therapeutic targets for HD.
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  • 文章类型: Journal Article
    本研究通过孟德尔随机化(MR)分析,研究了不同运动强度对2型糖尿病(T2D)的因果影响,使用遗传变异作为工具变量。
    进行了双样本MR分析,采用逆方差加权(IVW)作为主要方法,由加权中位数支持,MR-Egger回归,MR-PRESSO,和MR鲁棒性调整的轮廓分数。数据来自国际运动遗传学数据库(IEGD)和全球糖尿病研究联盟(GRC)。包括超过150,000个人的运动强度和约200,000名T2D患者和对照。根据全基因组显著性(P<5×10^-8)和连锁不平衡标准(距离>10,000kb,r^2<0.001)。
    IVW分析表明,高强度运动可能会降低T2D风险,但相关性无统计学意义(OR=0.667,95%CI=0.104~4.255,P=0.667)。宽置信区间表示效果估计的不确定性。低强度运动对T2D风险无显著影响(OR~1.0)。敏感性分析,包括加权中位数和MR-Egger回归,证实高强度运动与T2D风险之间没有显着关联。MR-PRESSO分析没有发现明显的异常值,多效性的整体检验无统计学意义(P=0.455)。IVW分析中异质性的CochranQ检验无统计学意义(Q=12.45,P=0.234),表明SNP推导的估计值之间的一致性。
    高强度运动可能会降低T2D风险,但这种关联在统计学上并不显着。需要进一步的研究来了解运动强度与T2D之间的复杂关系。
    UNASSIGNED: This study examines the causal effects of varying exercise intensities on type 2 diabetes mellitus (T2D) through Mendelian randomization (MR) analysis, using genetic variants as instrumental variables.
    UNASSIGNED: A two-sample MR analysis was performed, employing Inverse Variance Weighted (IVW) as the primary method, supported by weighted median, MR-Egger regression, MR-PRESSO, and MR robustness-adjusted contour scores. Data were obtained from the International Exercise Genetics Database (IEGD) and the Global Diabetes Research Consortium (GRC), encompassing over 150,000 individuals for exercise intensity and around 200,000 T2D patients and controls. SNPs linked to exercise intensity were selected based on genome-wide significance (P < 5 × 10^-8) and linkage disequilibrium criteria (distance >10,000 kb, r^2 < 0.001).
    UNASSIGNED: The IVW analysis suggested that high-intensity exercise might reduce T2D risk, but the association was not statistically significant (OR = 0.667, 95% CI = 0.104-4.255, P = 0.667). The wide confidence interval indicates uncertainty in the effect estimate. Low-intensity exercise showed no significant effect on T2D risk (OR ∼ 1.0). Sensitivity analyses, including weighted median and MR-Egger regression, confirmed no significant association between high-intensity exercise and T2D risk. The MR-PRESSO analysis found no significant outliers, and the global test for pleiotropy was non-significant (P = 0.455). Cochran\'s Q test for heterogeneity in the IVW analysis was non-significant (Q = 12.45, P = 0.234), indicating consistency among SNP-derived estimates.
    UNASSIGNED: High-intensity exercise potentially reduces T2D risk, but the association is not statistically significant. Further research is needed to understand the complex relationship between exercise intensity and T2D.
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  • 文章类型: Journal Article
    肺腺癌(LUAD)是最常见的肺癌类型,其发病机制仍未完全阐明。炎症和代谢失调被认为在LUAD发育中起关键作用。但其因果关系和具体机制尚不清楚.
    本研究采用双样本孟德尔随机化(MR)方法来系统地评估91个循环炎症因子之间的因果关系,1400种血清代谢物,还有LUAD.我们利用来自FinnGen生物库的LUAD全基因组关联研究(GWAS)数据和来自GWAS目录的代谢物和炎症因子的GWAS数据进行双样本MR分析。对于确定的关键代谢物,我们进一步使用介体MR来研究其在IL-17A对LUAD影响中的中介作用,并通过蛋白质-蛋白质相互作用和功能富集分析探索潜在的机制.
    MR分析显示IL-17A(OR0.78,95CI0.62-0.99)与LUAD呈负相关,而71种代谢物与LUAD显著相关。其中,阿魏酸4-硫酸盐可能在IL-17A抑制LUAD中起关键的介导作用(OR0.87,95CI0.78-0.97)。IL-17A可能通过与阿魏酸4-硫酸盐代谢相关基因(如SULT1A1,CYP1A1等)的广泛相互作用发挥其抗LUAD作用。),抑制氧化应激和炎症反应,以及阿魏酸4-硫酸盐(如MAPK,NF-κB,等。).
    这项研究发现了IL-17A之间的因果关系,多种血清代谢物,和LUAD的发生,揭示炎症和代谢失调在LUAD发病机制中的关键作用。我们的发现为特定的炎症因子和代谢物作为LUAD的早期预测和风险评估生物标志物提供了新的循证医学支持。为后续机理研究和精准医学应用提供重要线索。
    UNASSIGNED: Lung adenocarcinoma (LUAD) is the most common type of lung cancer, and its pathogenesis remains not fully elucidated. Inflammation and metabolic dysregulation are considered to play crucial roles in LUAD development, but their causal relationships and specific mechanisms remain unclear.
    UNASSIGNED: This study employed a two-sample Mendelian randomization (MR) approach to systematically evaluate the causal associations between 91 circulating inflammatory factors, 1,400 serum metabolites, and LUAD. We utilized LUAD genome-wide association studies (GWAS) data from the FinnGen biobank and GWAS data of metabolites and inflammatory factors from the GWAS catalog to conduct two-sample MR analyses. For the identified key metabolites, we further used mediator MR to investigate their mediating effects in the influence of IL-17A on LUAD and explored potential mechanisms through protein-protein interaction and functional enrichment analyses.
    UNASSIGNED: The MR analyses revealed that IL-17A (OR 0.78, 95%CI 0.62-0.99) was negatively associated with LUAD, while 71 metabolites were significantly associated with LUAD. Among them, ferulic acid 4-sulfate may play a crucial mediating role in the suppression of LUAD by IL-17A (OR 0.87, 95%CI 0.78-0.97). IL-17A may exert its anti-LUAD effects through extensive interactions with genes related to ferulic acid 4-sulfate metabolism (such as SULT1A1, CYP1A1, etc.), inhibiting oxidative stress and inflammatory responses, as well as downstream tumor-related pathways of ferulic acid 4-sulfate (such as MAPK, NF-κB, etc.).
    UNASSIGNED: This study discovered causal associations between IL-17A, multiple serum metabolites, and LUAD occurrence, revealing the key role of inflammatory and metabolic dysregulation in LUAD pathogenesis. Our findings provide new evidence-based medical support for specific inflammatory factors and metabolites as early predictive and risk assessment biomarkers for LUAD, offering important clues for subsequent mechanistic studies and precision medicine applications.
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  • 文章类型: Journal Article
    自身免疫性疾病与虚弱的因果关系尚未确定。我们进行了孟德尔随机化(MR)研究,以揭示自身免疫性疾病与虚弱之间的因果关系。
    进行了MR分析,以探索自身免疫性疾病与虚弱之间的关系,使用汇总的全基因组关联统计。
    通过全面细致的筛选过程,我们纳入了46、7、12、20、5和53个单核苷酸多态性(SNP)作为甲状腺功能减退症的工具变量(IVs),甲状腺功能亢进,类风湿性关节炎(RA),1型糖尿病(T1D),多发性硬化症(MS),和整体的自身免疫性疾病,分别。我们的分析显示甲状腺功能减退(OR=1.023,95%CI:1.008-1.038,p=0.0015),甲状腺功能亢进(OR=1.024,95%CI:1.004-1.045,p=0.0163),RA(OR=1.031,95%CI:1.011-1.052,p=0.0017),T1D(OR=1.011,95%CI:1.004-1.017,p=0.0012),和整体自身免疫性疾病(OR=1.044,95%CI:1.028-1.061,p=5.32*10^-8)对虚弱表现出积极的因果关系。相反,MS(OR=0.984,95%CI:0.977-0.992,p=4.87*10^-5)与虚弱之间可能存在负因果关系。CochranQ检验表明源自甲状腺功能减退症的IVs之间存在异质性,甲状腺功能亢进,T1D,和整体自身免疫性疾病。MR-Egger回归分析显示,在任何进行的分析中都没有水平多效性。
    这项研究阐明了甲状腺功能减退,甲状腺功能亢进,RA,T1D,总体自身免疫性疾病与虚弱风险升高有关.相反,MS似乎与虚弱风险的潜在降低有关。
    UNASSIGNED: The causality of autoimmune diseases with frailty has not been firmly established. We conducted this Mendelian randomization (MR) study to unveil the causal associations between autoimmune diseases with frailty.
    UNASSIGNED: A MR analyses were performed to explore the relationships between autoimmune disease and frailty, using summary genome-wide association statistics.
    UNASSIGNED: Through a comprehensive and meticulous screening process, we incorporated 46, 7, 12, 20, 5, and 53 single nucleotide polymorphisms (SNPs) as instrumental variables (IVs) for hypothyroidism, hyperthyroidism, rheumatoid arthritis (RA), type 1 diabetes (T1D), multiple sclerosis (MS), and overall autoimmune disease, respectively. Our analysis revealed that hypothyroidism (OR = 1.023, 95% CI: 1.008-1.038, p = 0.0015), hyperthyroidism (OR = 1.024, 95% CI: 1.004-1.045, p = 0.0163), RA (OR = 1.031, 95% CI: 1.011-1.052, p = 0.0017), T1D (OR = 1.011, 95% CI: 1.004-1.017, p = 0.0012), and overall autoimmune disease (OR = 1.044, 95% CI: 1.028-1.061, p = 5.32*10^-8) exhibited a positive causal effect on frailty. Conversely, there may be a negative causal association between MS (OR = 0.984, 95% CI: 0.977-0.992, p = 4.87*10^-5) and frailty. Cochran\'s Q test indicated heterogeneity among IVs derived from hypothyroidism, hyperthyroidism, T1D, and overall autoimmune diseases. The MR-Egger regression analyzes revealed an absence of horizontal pleiotropy in any of the conducted analyses.
    UNASSIGNED: This study elucidates that hypothyroidism, hyperthyroidism, RA, T1D, and overall autoimmune disease were linked to an elevated risk of frailty. Conversely, MS appears to be associated with a potential decrease in the risk of frailty.
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  • 文章类型: Journal Article
    贫血,以血红蛋白或红细胞水平低为特征,是一个重要的全球健康问题,对公共卫生具有严重影响。最近的研究探索了贫血和25-羟维生素D[25(OH)D]之间的潜在联系。然而,确切的机制仍不清楚。本研究旨在阐明25(OH)D水平与贫血风险之间可能的因果关系。
    我们进行了一项综合调查,结合了观察性和孟德尔随机化(MR)分析。观察性研究包括详细的人口统计,合并症,以及从中国7160例住院患者中收集的实验室数据。对于MR分析,遗传多态性被用来评估因果效应。
    观察分析显示,25(OH)D水平与贫血风险呈负相关,分层分析表明存在非线性关联,阈值为48.716nmol/L。MR分析证实了较高的25(OH)D水平与贫血风险降低之间的保护性因果关系。双向MR分析没有发现贫血影响25(OH)D水平的证据。
    这项研究提供了强有力的证据,证明25(OH)D水平升高与贫血发生率降低之间存在因果关系。研究结果强调了维生素D在预防贫血中的潜在作用,支持需要进一步研究补充维生素D作为降低贫血风险的策略。
    我们的研究结果支持以下假设:较高的25(OH)D水平与贫血风险降低有因果关系,提示维生素D在贫血预防和公共卫生策略中的潜在作用。
    UNASSIGNED: Anemia, characterized by low hemoglobin or erythrocyte levels, is a significant global health issue with severe implications for public health. Recent studies have explored the potential link between anemia and 25-hydroxyvitamin D [25(OH)D], yet the precise mechanisms remain unclear. This study aims to clarify the possible causal relationship between 25(OH)D levels and anemia risk.
    UNASSIGNED: We conducted a comprehensive investigation combining observational and Mendelian randomization (MR) analyses. The observational study included detailed demographic, comorbidities, and laboratory data collected from 7160 hospitalized patients in China. For the MR analysis, genetic polymorphisms were utilized to assess causal effects.
    UNASSIGNED: Observational analysis revealed an inverse relationship between 25(OH)D levels and the risk of anemia, with stratified analysis indicating a nonlinear association and a threshold of 48.716 nmol/L. The MR analysis confirmed a protective causal relationship between higher 25(OH)D levels and a reduced risk of anemia. Bidirectional MR analysis found no evidence that anemia influences 25(OH)D levels.
    UNASSIGNED: This study provides strong evidence of a causal link between increased 25(OH)D levels and a lower incidence of anemia. The findings highlight the potential role of vitamin D in anemia prevention, supporting the need for further research into vitamin D supplementation as a strategy to reduce anemia risk.
    UNASSIGNED: Our findings support the hypothesis that higher 25(OH)D levels are causally associated with a reduced risk of anemia, suggesting vitamin D\'s potential role in anemia prevention and public health strategies.
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