mark-recapture

标记 - 重新捕获
  • 文章类型: Journal Article
    我们引入了一种新的方法,通过使标记重新捕获方法适应分类数据库的比较来估计可接受的物种多样性。随着时间的推移,分类数据库应该变得更加完整,因此,对其完整性的估计和它所处理的分类单元的已知多样性的误差条将减少。独立的数据库可以相互关联,所以我们用估计的时间过程比较它们来理解相关性的影响。如果后面的估计值明显大于前面的估计值,数据库是正相关的,如果它小得多,它们是负相关的,如果估计大致保持不变,那么相关性已经被平均了。我们通过估计MolluscaBase对于接受的陆生腹足动物名称的完整程度来测试此方法。使用来自独立数据库的随机名字样本,我们确定每个名称是否导致MolluscaBase中接受的名称。2020年8月测试的样本发现,16.7%的测试名称丢失;2021年7月,一个人发现5.3%丢失。MolluscaBase在此期间增长了近3,000种被接受的物种,达到27,050种。估计范围从2021年的28409±365到2020年的29063±771。所有估计都有重叠的95%置信区间,表明数据库之间的相关性不会导致重大问题。超过抽样误差的不确定性增加了475±430种,因此,我们对2021年底公认的陆生腹足动物物种的估计为28,895±630种。这一估计比以前的物种高出4000多个物种。这一估计没有考虑到物种进出同义词的持续流动,新发现,或改变分类方法和概念。陆生腹足动物的物种命名曲线还远未达到渐近线,加上额外的不确定性,这意味着,预测有多少更多的物种可能最终被认可是目前不可行的。我们的方法可用于估计最近软体动物的名称总数(相对于目前接受的名称),已知的软体动物化石的多样性,以及其他门的已知多样性。
    We introduce a new method of estimating accepted species diversity by adapting mark-recapture methods to comparisons of taxonomic databases. A taxonomic database should become more complete over time, so the error bar on an estimate of its completeness and the known diversity of the taxon it treats will decrease. Independent databases can be correlated, so we use the time course of estimates comparing them to understand the effect of correlation. If a later estimate is significantly larger than an earlier one, the databases are positively correlated, if it is significantly smaller, they are negatively correlated, and if the estimate remains roughly constant, then the correlations have averaged out. We tested this method by estimating how complete MolluscaBase is for accepted names of terrestrial gastropods. Using random samples of names from an independent database, we determined whether each name led to a name accepted in MolluscaBase. A sample tested in August 2020 found that 16.7% of tested names were missing; one in July 2021 found 5.3% missing. MolluscaBase grew by almost 3,000 accepted species during this period, reaching 27,050 species. The estimates ranged from 28,409 ± 365 in 2021 to 29,063 ± 771 in 2020. All estimates had overlapping 95% confidence intervals, indicating that correlations between the databases did not cause significant problems. Uncertainty beyond sampling error added 475 ± 430 species, so our estimate for accepted terrestrial gastropods species at the end of 2021 is 28,895 ± 630 species. This estimate is more than 4,000 species higher than previous ones. The estimate does not account for ongoing flux of species into and out of synonymy, new discoveries, or changing taxonomic methods and concepts. The species naming curve for terrestrial gastropods is still far from reaching an asymptote, and combined with the additional uncertainties, this means that predicting how many more species might ultimately be recognized is presently not feasible. Our methods can be applied to estimate the total number of names of Recent mollusks (as opposed to names currently accepted), the known diversity of fossil mollusks, and known diversity in other phyla.
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  • 文章类型: Journal Article
    河流河口的障碍阻止了每年春天到达欧洲海岸的玻璃鳗鱼(安圭拉anguilla)的移民。这导致屏障下方迁移的玻璃鳗鱼不自然地积累,这可能会导致食鱼对玻璃鳗鱼的额外损失。捕食损失的比例可以使用标记再捕获技术和丰度估算结合食鱼的胃含量分析来估算。尽管如此,标记透明玻璃鳗鱼是否会增加捕食风险,玻璃鳗鱼在食鱼中的消化率是多少,目前尚不清楚。这项研究旨在确定标记的玻璃鳗鱼的捕食风险是否增加;它还研究了指定时间框架后食鱼鱼的玻璃鳗鱼消化状况。进行了48个试验的实验室实验。标记(可见植入弹性体,VIE)和未标记的玻璃鳗鱼在2小时的试验中暴露于小(19.1-24.4厘米)和大(31.9-43.5厘米)鲈鱼(Dicentrarchuslabrax)。在48%的试验中,存在成功的捕食,并且13%的人表现出明显的捕食尝试,其中鲈鱼没有捕获玻璃鳗鱼。标记和未标记的玻璃鳗鱼之间以及红色和蓝色标记的玻璃鳗鱼之间的捕食率没有显着差异。大鲈鱼早于更多,但是在实验室条件下所有尺寸都会消耗玻璃鳗鱼。胃含量分析显示,在2小时试验结束后4-6小时,完整的玻璃鳗鱼体和部分玻璃鳗鱼体长达16-18小时。这项研究表明,在使用透明玻璃鳗鱼中的VIE标签的标记-捕获研究中,标记不会增加捕食。它还表明,如果在捕食后4-6小时内进行胃内容物分析,则可以估计捕食与当地玻璃鳗鱼丰度的比例。
    Barriers in the estuaries of the rivers prevent the immigration of glass eels (Anguilla anguilla) arriving on the European coast every spring. This leads to an unnatural accumulation of migrating glass eels below the barriers, and this may lead to additional losses in glass eels by piscivorous fish. The proportion of predation losses can be estimated using mark-recapture techniques and abundance estimates in combination with stomach content analysis of piscivorous fish. Nonetheless, whether tagging transparent glass eels increases predation risk and what the digestion rate of glass eel is in piscivorous fish are unknown. This study aimed to determine whether there is an increased predation risk for tagged glass eel; it also studies glass eel digestion status in piscivorous fish after appointed time frames. A laboratory experiment with 48 trials was conducted. Tagged (visible implanted elastomer, VIE) and untagged glass eels were exposed to small (19.1-24.4 cm) and large (31.9-43.5 cm) sea bass (Dicentrarchus labrax) during a 2 h trial. In 48% of the trials, successful predation was present and 13% showed clear predation attempts in which bass did not capture glass eels. No significant difference was found in predation rate between tagged and untagged glass eels and between red and blue tagged glass eels. Large sea bass predated more, but all sizes consumed glass eel under laboratory conditions. Stomach content analysis showed intact glass eel bodies 4-6 h after ending the 2 h trial and parts of glass eel bodies up to 16-18 h. This study showed that tagging does not increase predation in mark-recapture studies using VIE-tags in transparent glass eel. It also shows that the proportion of predation in relation to local glass eel abundance can be estimated if stomach content analysis is conducted within 4-6 h after predation.
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  • 文章类型: Journal Article
    Mesomycetozoean-induced infections (order Dermocystida, genus Amphibiocystidium) in European and North American amphibians are causing alarm. To date, the pathogenicity of these parasites in field conditions has been poorly studied, and demographic consequences on amphibian populations have not been explored. In this study, an Amphibiocystidium sp. infection is reported in a natural population of the Italian stream frog (Rana italica) of Central Italy, over a 7-year period from 2008 to 2014. Light and electron microscope examinations, as well as partial 18S rDNA sequence analysis were used to characterize the parasite. Moreover, a capture-mark-recapture study was conducted to assess the frog demographics in response to infection. Negative effects of amphibiocystidiosis on individual survival and population fitness were absent throughout the sampling period, despite the high estimates of disease prevalence. This might have been due to resistance and/or tolerance strategies developed by the frogs in response to the persistence of Amphibiocystidium infection in this system. We hypothesized that in the examined R. italica population, amphibiocystidiosis is an ongoing endemic/epidemic infection. However, ecological and host-specific factors, interacting in a synergistic fashion, might be responsible for variations in the susceptibility to Amphibiocystidium infection of both conspecific populations and heterospecific individuals of R. italica.
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