genetic modifiers

遗传修饰剂
  • 文章类型: Journal Article
    镰状细胞病(SCD)在临床上表现为多种并发症。Stroke,缺血性和出血性,以及无声的白质变化,发生在相对较高的患病率。了解中风最可能发生的原因和原因对于有效预防和治疗SCD患者至关重要。基因研究,包括全基因组和外显子组关联研究(GWAS和EWAS),已经发现了几个关键的修饰物,这些修饰物通过包括血红蛋白F(HbF)调节在内的机制与SCD中的卒中/卒中风险增加相关,炎症,细胞粘附,内皮破裂,和溶血。我们对迄今为止最清楚地证明了关联的修饰语进行了综述。需要更多的研究来验证其他潜在的多态性并识别新的多态性。在临床护理中纳入以基因为中心的筛查可以提供更有针对性的途径,更有效,在这一人群中预防中风的毒性较低。本综述的数据将用于告知国际血红蛋白病研究网络(INHERENT)联盟进行的初始GWAS。
    Sickle cell disease (SCD) clinically manifests itself with a myriad of complications. Stroke, both ischemic and hemorrhagic, as well as silent white matter changes, occurs at a relatively high prevalence. Understanding why and in whom stroke is most likely to occur is critical to the effective prevention and treatment of individuals with SCD. Genetic studies, including genome- and exome-wide association studies (GWAS and EWAS), have found several key modifiers associated with increased stroke/stroke risk in SCD via mechanisms including Hemoglobin F (HbF) modulation, inflammation, cellular adhesion, endothelial disruption, and hemolysis. We present a review on the modifiers that have most clearly demonstrated an association to date. More studies are needed to validate other potential polymorphisms and identify new ones. Incorporating gene-focused screenings in clinical care could provide avenues for more targeted, more effective, and less toxic prevention of stroke in this population. The data from this review will be used to inform the initial GWAS performed by the International Hemoglobinopathy Research Network (INHERENT) consortium.
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  • 文章类型: Journal Article
    镰状细胞性贫血(SCA)是儿童中风的最常见原因。因为它是一种罕见的疾病,调查SCD患者卒中等并发症的相关性的研究样本量较小.这里,我们对探索遗传变异与卒中关联的研究进行了系统综述和荟萃分析,以更好地表明其与卒中的关联.搜索PubMed和GoogleScholar,以确定对SCA患者中风风险的遗传变异进行关联分析的研究。筛选合格的研究后,提取与卒中关联分析的汇总统计量和其他一般信息。使用工具METAL的固定效应方法进行Meta分析,并使用R程序绘制森林地块。随机效应模型作为观察到显著异质性的基因座的敏感性分析。使用搜索词确定了407项研究,筛选后纳入了37项研究,累计分析了11,373名SCA患者。这37项研究共纳入2222例SCA卒中患者,主要包括非洲血统的个体(N=16)。这些研究中的三项进行了全外显子组测序,而35项进行了基于单核苷酸的基因分型。尽管研究报告与132个基因座相关,荟萃分析只能对12个来自两个或更多研究数据的基因座进行.荟萃分析后,我们观察到四个基因座与卒中风险显着相关:-α3.7kbα-地中海贫血缺失(P=0.00000027),rs489347-TEK(P=0.00081),rs2238432-ADCY9(P=0.00085),rs11853426-ANXA2(P=0.0034),和rs1800629-TNF(P=0.0003396)。需要改善地中海盆地和印度等SCD患病率高的地区的种族代表性,以进行中风等相关并发症的遗传研究。需要对SCD和包括卒中在内的相关并发症进行更大的全基因组协作研究。
    Sickle cell anemia (SCA) is the most common cause of stroke in children. As it is a rare disease, studies investigating the association with complications like stroke in SCD have small sample sizes. Here, we performed a systematic review and meta-analysis of the studies exploring an association of genetic variants with stroke to get a better indication of their association with stroke. PubMed and Google Scholar were searched to identify studies that had performed an association analysis of genetic variants for the risk of stroke in SCA patients. After screening of eligible studies, summary statistics of association analysis with stroke and other general information were extracted. Meta-analysis was performed using the fixed effect method on the tool METAL and forest plots were plotted using the R program. The random effect model was performed as a sensitivity analysis for loci where significant heterogeneity was observed. 407 studies were identified using the search term and after screening 37 studies that cumulatively analyzed 11,373 SCA patients were included. These 37 studies included a total of 2,222 SCA patients with stroke, predominantly included individuals of African ancestry (N = 16). Three of these studies performed whole exome sequencing while 35 performed single nucleotide-based genotyping. Though the studies reported association with 132 loci, meta-analyses could be performed only for 12 loci that had data from two or more studies. After meta-analysis we observed that four loci were significantly associated with risk for stroke: -α3.7 kb Alpha-thalassemia deletion (P = 0.00000027), rs489347-TEK (P = 0.00081), rs2238432-ADCY9 (P = 0.00085), rs11853426-ANXA2 (P = 0.0034), and rs1800629-TNF (P = 0.0003396). Ethnic representation of regions with a high prevalence of SCD like the Mediterranean basin and India needs to be improved for genetic studies on associated complications like stroke. Larger genome-wide collaborative studies on SCD and associated complications including stroke need to be performed.
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