epigenetic modifications

表观遗传修饰
  • 文章类型: Journal Article
    胎肺发育是一个关键而复杂的过程,为产后呼吸健康奠定了基础。然而,在这个微妙的发育过程中中断会导致胎儿肺部发育障碍,影响新生儿结局,并可能影响成年后的健康结局。最近的研究揭示了胎儿肺部发育障碍与成人疾病发展之间的有趣关联。了解这些联系可以为健康和疾病的发展起源提供有价值的见解,为有针对性的预防措施和临床干预措施铺平道路。本文旨在全面探讨胎儿肺部发育障碍与成人疾病的关系。我们深入研究胎儿肺发育阶段,检查影响胎儿肺成熟的关键因素。随后,我们调查特定的胎儿肺部发育障碍,如呼吸窘迫综合征(RDS),支气管肺发育不良(BPD),先天性膈疝(CDH),和其他异常。此外,我们探索这些关联背后的潜在机制,考虑到表观遗传修饰的作用,跨代效应,和宫内环境因素。此外,我们研究了将胎儿肺部发育障碍与成人呼吸系统疾病联系起来的流行病学证据和临床发现,包括哮喘,慢性阻塞性肺疾病(COPD),和其他呼吸道疾病。这篇综述为医疗保健专业人员和研究人员提供了宝贵的见解,指导未来的调查和制定战略的预防性干预和长期护理。
    Fetal lung development is a crucial and complex process that lays the groundwork for postnatal respiratory health. However, disruptions in this delicate developmental journey can lead to fetal lung development disorders, impacting neonatal outcomes and potentially influencing health outcomes well into adulthood. Recent research has shed light on the intriguing association between fetal lung development disorders and the development of adult diseases. Understanding these links can provide valuable insights into the developmental origins of health and disease, paving the way for targeted preventive measures and clinical interventions. This review article aims to comprehensively explore the association of fetal lung development disorders with adult diseases. We delve into the stages of fetal lung development, examining key factors influencing fetal lung maturation. Subsequently, we investigate specific fetal lung development disorders, such as respiratory distress syndrome (RDS), bronchopulmonary dysplasia (BPD), congenital diaphragmatic hernia (CDH), and other abnormalities. Furthermore, we explore the potential mechanisms underlying these associations, considering the role of epigenetic modifications, transgenerational effects, and intrauterine environmental factors. Additionally, we examine the epidemiological evidence and clinical findings linking fetal lung development disorders to adult respiratory diseases, including asthma, chronic obstructive pulmonary disease (COPD), and other respiratory ailments. This review provides valuable insights for healthcare professionals and researchers, guiding future investigations and shaping strategies for preventive interventions and long-term care.
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  • 文章类型: Published Erratum
    [这更正了文章DOI:10.3389/fonc.2023.1093063。].
    [This corrects the article DOI: 10.3389/fonc.2023.1093063.].
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  • 文章类型: Review
    RNA甲基化修饰与肿瘤的发展密切相关。迁移,入侵和对各种疗法的反应。最近的研究表明,关于RNA甲基化在肿瘤免疫治疗中的作用,肿瘤微环境和代谢重编程。然而,关于特定癌症类型中肿瘤化学耐药性与N6-甲基腺苷(m6A)甲基转移酶之间关联的研究仍然很少。结直肠癌(CRC)是全球最常见的胃肠道癌症之一。常规化疗仍然是CRC的主要治疗方式,化疗耐药是治疗失败的主要原因。m6A甲基转移酶的表达水平,包括甲基转移酶样3(METTL3),CRC组织样本中的METTL14和METTL16与患者的临床结果和化疗疗效相关。天然药物成分,比如槲皮素,有可能作为METTL3抑制剂对抗CRC患者的化疗耐药。本文综述了不同类型的关键RNA甲基化酶在CRC发生发展中的作用,关注与化疗耐药相关的机制。还列出了某些抑制剂的开发进展。还概述了使用自然疗法开发靶向m6A甲基化的抗肿瘤药物的潜力。
    RNA methylation modifications are closely linked to tumor development, migration, invasion and responses to various therapies. Recent studies have shown notable advancements regarding the roles of RNA methylation in tumor immunotherapy, the tumor microenvironment and metabolic reprogramming. However, research on the association between tumor chemoresistance and N6‑methyladenosine (m6A) methyltransferases in specific cancer types is still scarce. Colorectal cancer (CRC) is among the most common gastrointestinal cancers worldwide. Conventional chemotherapy remains the predominant treatment modality for CRC and chemotherapy resistance is the primary cause of treatment failure. The expression levels of m6A methyltransferases, including methyltransferase‑like 3 (METTL3), METTL14 and METTL16, in CRC tissue samples are associated with patients\' clinical outcomes and chemotherapy efficacy. Natural pharmaceutical ingredients, such as quercetin, have the potential to act as METTL3 inhibitors to combat chemotherapy resistance in patients with CRC. The present review discussed the various roles of different types of key RNA methylation enzymes in the development of CRC, focusing on the mechanisms associated with chemotherapy resistance. The progress in the development of certain inhibitors is also listed. The potential of using natural remedies to develop antitumor medications that target m6A methylation is also outlined.
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  • 文章类型: Journal Article
    近年来,酒精相关性肝病(ALD)中免疫功能障碍的机制引起了越来越多的研究兴趣。酒精介导的免疫功能障碍被认为是ALD相关微生物感染和炎症反应的潜在原因。生物体的免疫微环境本质上是免疫细胞之间相互作用的复杂网络,细胞因子,细胞外基质,和其他免疫相关分子。这种微环境对环境线索具有高度适应性和响应性。免疫微环境的表观遗传重编程最近已成为ALD进展的关键驱动因素,特别是在内毒素耐受性和免疫紊乱的情况下。尽管已知表观遗传修饰在ALD的免疫微环境调节中起重要作用,实现这种调节的具体机制和分子过程尚未完全理解。本文旨在概述饮酒对表观遗传学的影响,特别着重于总结有关饮酒对免疫微环境的影响所涉及的表观遗传调节机制的数据。此外,本文旨在对不同形式ALD的表观遗传修饰进行综述。这篇综述有望为诊断提供新的视角,治疗,监测,从表观遗传学角度评估ALD的预后。
    The mechanisms of immune dysfunction in alcohol-associated liver disease (ALD) have garnered growing research interest in recent times. Alcohol-mediated immune dysfunction has been implicated as a potential cause of ALD-associated microbial infection and inflammatory response. The immune microenvironment of an organism is essentially a complex network of interactions between immune cells, cytokines, extracellular matrix, and other immune-related molecules. This microenvironment is highly adaptive and responsive to environmental cues. Epigenetic reprogramming of the immune microenvironment has recently emerged as a key driver of ALD progression, particularly in the context of endotoxin tolerance and immune disorders. Although epigenetic modifications are known to play an important role in the regulation of the immune microenvironment in ALD, the specific mechanisms and molecular processes by which this regulation is achieved are yet to be fully understood. This paper aims to provide an overview of the current knowledge on the effects of alcohol consumption on epigenetics, with special focus on summarizing the data on the epigenetic regulatory mechanisms involved in the effects of alcohol consumption on the immune microenvironment. In addition, this paper aims to present a review of the epigenetic modifications involved in different forms of ALD. This review is expected to offer new perspectives for the diagnosis, treatment, monitoring, and prognostic assessment of ALD from an epigenetic perspective.
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  • 文章类型: Journal Article
    肝细胞癌(HCC)是最常见的恶性肿瘤之一,发病率和死亡率高。由于大多数HCC患者诊断为晚期,死于复发和转移,它的病理学和新的生物标志物是需要的。环状RNA(circularRNAs,circRNAs)是长链非编码RNA(lncRNAs)的一大亚类,具有共价闭环结构,保守的,稳定,哺乳动物细胞中的组织特异性表达。CircRNAs在HCC起始过程中发挥多种功能,成长和进步,作为有前途的诊断生物标志物,该疾病的预后和治疗目标。这篇综述简要描述了circRNAs的生物发生和生物学功能,并阐明了circRNAs在HCC发生发展中的作用。特别是关于上皮-间质转化(EMT),耐药性和与表观遗传修饰的相互作用。此外,这篇综述强调了circRNAs作为HCC潜在生物标志物和治疗靶点的意义.我们希望为circRNAs在HCC中的作用提供新的见解。
    Hepatocellular carcinoma (HCC) is one of the most frequent malignancies, with high incidence and mortality. As the majority of HCC patients are diagnosed at an advanced stage and die of recurrence and metastasis, its pathology and new biomarkers are needed. Circular RNAs (circRNAs) are a large subclass of long non-coding RNAs (lncRNAs) with covalently closed loop structures and abundant, conserved, stable, tissue-specific expression in mammalian cells. CircRNAs exert multiple functions in HCC initiation, growth and progression, serving as promising biomarkers for diagnosis, prognosis and therapeutic targets for this disease. This review briefly describes the biogenesis and biological functions of circRNAs and elucidates the roles of circRNAs in the development and progression of HCC, especially regarding epithelial-mesenchymal transition (EMT), drug resistance and interactions with epigenetic modifications. In addition, this review highlights the implications of circRNAs as potential biomarkers and therapeutic targets for HCC. We hope to provide novel insight into the roles of circRNAs in HCC.
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  • 文章类型: Journal Article
    果实成熟和采后贮藏过程中发生的果实软化决定了果实的品质,保质期和商业价值,使水果对种子传播更具吸引力。此外,过度软化会导致水果最终腐烂,使果实容易受到机会病原体的入侵。已经进行了许多研究以揭示水果如何软化以及如何控制软化。然而,软化是一个复杂而微妙的生命过程,包括生理,生化和代谢变化,它们彼此密切相关,并受温度等环境条件的影响,湿度和光线。在这次审查中,目前有关水果软化机制的知识是从细胞壁代谢(细胞壁结构变化和细胞壁降解酶),植物激素(ETH,ABA,IAA和BR等人。),转录因子(MADS-Box,AP2/ERF,NAC,MYB和BZR)和表观遗传学(DNA甲基化,组蛋白去甲基化和组蛋白乙酰化),并提供了这些因素之间的调节关系图。为抗软化水果的栽培提供参考。
    Fruit softening that occurs during fruit ripening and postharvest storage determines the fruit quality, shelf life and commercial value and makes fruits more attractive for seed dispersal. In addition, over-softening results in fruit eventual decay, render fruit susceptible to invasion by opportunistic pathogens. Many studies have been conducted to reveal how fruit softens and how to control softening. However, softening is a complex and delicate life process, including physiological, biochemical and metabolic changes, which are closely related to each other and are affected by environmental conditions such as temperature, humidity and light. In this review, the current knowledge regarding fruit softening mechanisms is summarized from cell wall metabolism (cell wall structure changes and cell-wall-degrading enzymes), plant hormones (ETH, ABA, IAA and BR et al.), transcription factors (MADS-Box, AP2/ERF, NAC, MYB and BZR) and epigenetics (DNA methylation, histone demethylation and histone acetylation) and a diagram of the regulatory relationship between these factors is provided. It will provide reference for the cultivation of anti-softening fruits.
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  • 文章类型: Journal Article
    针对程序性细胞死亡蛋白1(PD‑1)/程序性死亡配体1(PD‑L1)轴的免疫检查点抑制剂在患有不同实体瘤的患者中取得了显着且持久的疗效,并提高了他们的生存率。然而,对免疫检查点阻断的原发性或获得性耐药性的存在导致只有一小部分患者从治疗中受益.越来越多的临床前研究报道,肿瘤细胞中的PD‑L1表达与许多表观遗传变化有关,包括组蛋白修饰,非编码RNA调控和DNA甲基化。此外,在各种癌症模型中,多种表观遗传靶向药物已被证明直接或间接干扰PD‑L1表达.这为更好地表征PD‑L1表达的调节机制和探索新的治疗策略提供了机会,以提高免疫抑制剂的反应率和克服耐药性。本综述集中在调节PD-L1表达的表观遗传机制的最新发现和证据,并讨论这种调节机制在实体瘤中的生物学和临床意义。表观遗传调控和PD‑1/PD‑L1轴阻断的合理组合可能改善实体瘤患者的预后。
    Immune checkpoint inhibitors targeting the programmed cell death protein 1 (PD‑1)/programmed death ligand 1 (PD‑L1) axis have achieved marked and durable efficacy in patients with different solid tumors and have improved their survival. However, the presence of primary or acquired resistance to immune checkpoint blockades results in only a small fraction of patients benefiting from the treatment. An increasing number of preclinical studies have reported that PD‑L1 expression in tumor cells is involved in a number of epigenetic changes, including histone modifications, non‑coding RNA regulation and DNA methylation. In addition, multiple epigenetic targeting drugs have been demonstrated to directly or indirectly interfere with PD‑L1 expression in various cancer models. This provides opportunities to better characterize the regulatory mechanisms of PD‑L1 expression and explore novel therapeutic strategies to improve immunosuppressant response rates and overcome drug resistance. The present review focuses on the latest findings and evidence on the epigenetic mechanism regulating PD‑L1 expression and discusses the biological and clinical implications of this regulatory mechanism in solid tumors. A rational combination of epigenetic regulation and PD‑1/PD‑L1 axis blockade may improve the prognosis of patients with solid tumors.
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  • 文章类型: Journal Article
    当前对三阴性乳腺癌(TNBC)的研究已将其划分为四阴性乳腺癌(QNBC)亚组。表观遗传修饰,如DNA甲基化,组蛋白翻译后修饰和染色质结构的相关变化与乳腺癌的发病机制有关。在这里,作者强调了观察到的具有表观遗传修饰的基因,这些基因与更具侵袭性的TNBC/QNBC发病机制和可能的干预措施相关.在PubMed/MEDLINE上进行了高级文献检索,Scopus和谷歌学者。结果表明,除了下调的雄激素受体外,还有9个表观遗传改变的基因/差异表达的蛋白质与TNBC的侵袭性有关,并且可能与TNBC向QNBC的转变有关。因此,通过表观遗传重编程恢复这些基因的正常表达可能对TNBC和QNBC患者有益。
    当雄激素受体在三阴性乳腺癌(TNBC)患者中变得不活跃时,它导致另一种称为四阴性乳腺癌(QNBC)的乳腺癌亚型。这是因为这些患者已经缺乏其他三种重要激素受体的生物学活性。这些受体的功能被用于治疗乳腺癌的一些药物所靶向,因此,TNBC和QNBC患者缺乏这些受体被认为与治疗反应不佳有关。一些表观遗传修饰涉及在TNBC患者中非常难以控制的更严重的疾病,并且可以促进其转变为更具侵袭性的QNBC亚型。可以通过逆转观察到的表观遗传改变来恢复改变的基因的正常功能来改善治疗反应。
    Current research on triple-negative breast cancer (TNBC) has resulted in delineation into the quadruple-negative breast cancer (QNBC) subgroup. Epigenetic modifications such as DNA methylation, histone posttranslational modifications and associated changes in chromatin architecture have been implicated in breast cancer pathogenesis. Herein, the authors highlight genes with observed epigenetic modifications that are associated with more aggressive TNBC/QNBC pathogenesis and possible interventions. Advanced literature searches were done on PubMed/MEDLINE, Scopus and Google Scholar. The results suggest that nine epigenetically altered genes/differentially expressed proteins in addition to the downregulated androgen receptor are associated with TNBC aggressiveness and could be implicated in the TNBC to QNBC transition. Thus, restoring the normal expression of these genes via epigenetic reprogramming could be therapeutically beneficial to TNBC and QNBC patients.
    When the androgen hormone receptor becomes inactive in triple-negative breast cancer (TNBC) patients, it results in another subtype of breast cancer called quadruple-negative breast cancer (QNBC). This is because these patients already lack the biological activities of three other important hormone receptors. The functions of these receptors are targeted by some drugs used in the management of breast cancers, so the lack of these receptors in TNBC and QNBC patients is thought to be linked with poor response to treatment. Some epigenetic modifications are involved in a more severe disease that is very difficult to control in TNBC patients and could facilitate its transition to the more aggressive QNBC subtype. Treatment response could be improved by restoring the normal function of the altered genes by reversing the observed epigenetic alterations.
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  • 文章类型: Journal Article
    动脉粥样硬化是一种慢性炎症性疾病,其特征是中型和大型动脉的广泛重塑。血管壁的向内重塑(=管腔收缩)是靶器官缺血的根本原因。因此,内向型重构可被认为是动脉粥样硬化病理的主要特征。外向重塑(=管腔扩大)是一种生理反应,补偿由新生内膜增生引起的管腔收缩,但是作为对血流变化的病理反应,向外重塑导致动脉壁大量变薄。变薄的血管壁容易破裂,随后的血栓形成占急性心血管事件的大多数。病理性重塑是由诱导血管平滑肌细胞从静止转变为增殖和迁移表型的炎症细胞驱动的。经过几十年的深入研究,动脉重塑的分子机制开始显现.在这个小型审查中,我们总结了目前有关血管平滑肌细胞表型从收缩表型转换为合成表型的表观遗传和转录调控的知识,并讨论了潜在的治疗选择.
    Atherosclerosis is a chronic inflammatory disease characterized by extensive remodeling of medium and large-sized arteries. Inward remodeling (=lumen shrinkage) of the vascular walls is the underlying cause for ischemia in target organs. Therefore, inward remodeling can be considered the predominant feature of atherosclerotic pathology. Outward remodeling (=lumen enlargement) is a physiological response compensating for lumen shrinkage caused by neointimal hyperplasia, but as a pathological response to changes in blood flow, outward remodeling leads to substantial arterial wall thinning. Thinned vascular walls are prone to rupture, and subsequent thrombus formation accounts for the majority of acute cardiovascular events. Pathological remodeling is driven by inflammatory cells which induce vascular smooth muscle cells to switch from quiescent to a proliferative and migratory phenotype. After decades of intensive research, the molecular mechanisms of arterial remodeling are starting to unfold. In this mini-review, we summarize the current knowledge of the epigenetic and transcriptional regulation of vascular smooth muscle cell phenotype switching from the contractile to the synthetic phenotype involved in arterial remodeling and discuss potential therapeutic options.
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  • 文章类型: Journal Article
    The DNA methyltransferase family contains a conserved set of DNA-modifying enzymatic proteins. They are responsible for epigenetic gene modulation, such as transcriptional silencing, transcription activation, and post-transcriptional modulation. Recent research has revealed that the canonical DNA methyltransferases (DNMTs) biological roles go beyond their traditional functions of establishing and maintaining DNA methylation patterns. Although a complete DNA methylation toolkit is absent in most insect orders, recent evidence indicates the de novo DNA methylation and maintenance function remain conserved. Studies using various molecular approaches provided evidence that DNMTs are multi-functional proteins. However, still in-depth studies on their biological role lack due to the least studied area in insects. Here, we review the DNA methylation toolkit of insects, focusing on recent research on various insect orders, which exhibit DNA methylation at different levels, and for which DNMTs functional studies have become available in recent years. We survey research on the potential roles of DNMTs in the regulation of gene transcription in insect species. DNMTs participate in different physiological processes by interacting with other epigenetic factors. Future studies on insect\'s DNMTs will benefit to understand developmental processes, responses to various stimuli, and adaptability of insects to different environmental conditions.
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