diverse populations

  • 文章类型: Randomized Controlled Trial
    需要数字解决方案来支持基因/基因组测试(GT)在不同临床环境和患者人群中的应用快速增长。我们开发了GUA,一种双语数字应用程序,可促进GT结果的披露。NYCKidSeq随机对照试验招募了不同的神经系统儿童,心脏,和接受GTs的免疫条件。该试验通过将家庭随机分配到GUíA(干预)或标准护理(SOC)的遗传咨询中,评估了GUíA对理解GT结果的影响。父母/法定监护人(参与者)在基线时完成调查,结果披露后,6个月后。调查措施评估了参与者对解释孩子GT结果的理解和信心以及客观理解的次要结果的主要研究结果。分析包括551个不同的参与者,270在GUíA臂和281在SOC。GUA组的参与者对结果的感知理解明显更高(OR=2.8,CI[1.004,7.617],p=0.049),并随着时间的推移保持更高的客观理解(OR=1.1,CI[1.004,1.127],p=0.038)与SOC相比。对感知的信心没有影响。西班牙裔/拉丁裔(a)个人在GUíA臂保持较高的感知理解(OR=3.9,CI[1.603,9.254],p=0.003),置信度(OR=2.7,CI[1.021,7.277],p=0.046),和客观理解(OR=1.1,CI[1.009,1.212],p=0.032)与SOC相比。该试验表明,GUíA对患有可疑遗传条件的儿童的不同父母对GT结果的理解产生了积极影响,并建立了利用GUíA提供复杂结果的案例。在不同人群中继续开发和评估数字应用对于在专科诊所公平扩展GT产品至关重要。
    Digital solutions are needed to support rapid increases in the application of genetic/genomic tests (GTs) in diverse clinical settings and patient populations. We developed GUÍA, a bilingual digital application that facilitates disclosure of GT results. The NYCKidSeq randomized controlled trial enrolled diverse children with neurologic, cardiac, and immunologic conditions who underwent GTs. The trial evaluated GUÍA\'s impact on understanding the GT results by randomizing families to results disclosure genetic counseling with GUÍA (intervention) or standard of care (SOC). Parents/legal guardians (participants) completed surveys at baseline, post-results disclosure, and 6 months later. Survey measures assessed the primary study outcomes of participants\' perceived understanding of and confidence in explaining their child\'s GT results and the secondary outcome of objective understanding. The analysis included 551 diverse participants, 270 in the GUÍA arm and 281 in SOC. Participants in the GUÍA arm had significantly higher perceived understanding post-results (OR = 2.8, CI[1.004, 7.617], p = 0.049) and maintained higher objective understanding over time (OR = 1.1, CI[1.004, 1.127], p = 0.038) compared to SOC. There was no impact on perceived confidence. Hispanic/Latino(a) individuals in the GUÍA arm maintained higher perceived understanding (OR = 3.9, CI[1.603, 9.254], p = 0.003), confidence (OR = 2.7, CI[1.021, 7.277], p = 0.046), and objective understanding (OR = 1.1, CI[1.009, 1.212], p = 0.032) compared to SOC. This trial demonstrates that GUÍA positively impacts understanding of GT results in diverse parents of children with suspected genetic conditions and builds a case for utilizing GUÍA to deliver complex results. Continued development and evaluation of digital applications in diverse populations are critical for equitably scaling GT offerings in specialty clinics.
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  • 文章类型: Preprint
    需要数字解决方案来支持遗传和基因组测试(GT)在不同临床环境和患者人群中的应用快速增长。我们开发了GUA,一个基于Web的双语平台,可促进GT结果的披露。NYCKidSeq随机对照试验评估了GUíA对理解GT结果的影响。
    NYCKidSeq招募了患有神经系统疾病的不同儿童,心脏,和接受GT的免疫条件。家庭被随机分配到GUíA(干预)或标准护理(SOC)遗传咨询的遗传咨询中,以披露结果。父母/法定监护人(参与者)在基线时完成调查,结果披露后,6个月后.调查措施评估了对解释孩子的GT结果的感知理解和信心的主要研究结果,以及客观理解的次要结果。我们使用回归模型来评估干预和研究结果之间的关联。
    分析包括551名参与者,270在GUíA臂和281在SOC。参与者的平均年龄为41.1岁,88.6%为母亲。大多数参与者是西班牙裔/拉丁裔(a)(46.3%),白人/欧洲裔美国人(24.5%),或黑人/非裔美国人(15.8%)。GUA组的参与者对结果的感知理解明显更高(OR=2.8,CI[1.004,7.617],P=0.049),并随着时间的推移保持更高的客观理解(OR=1.1,CI[1.004,1.127],P=0.038)与SOC臂中的那些相比。对感知的信心没有影响。西班牙裔/拉丁裔(A)个人在GUíA臂保持较高的感知理解(OR=3.9,CI[1.6,9.3],P=0.003),置信度(OR=2.7,CI[1.021,7.277],P=0.046),和客观理解(OR=1.1,CI[1.009,1.212],P=0.032)与SOC相比。
    该试验表明,GUíA对患有可疑遗传疾病的儿童的不同父母对GT结果的理解产生了积极影响。这些发现为利用GUA提供复杂且通常模棱两可的遗传结果奠定了基础。在不同人群中继续开发和评估数字应用对于在专科诊所公平扩展GT产品至关重要。
    UNASSIGNED: Digital solutions are needed to support rapid increases in the application of genetic and genomic tests (GT) in diverse clinical settings and patient populations. We developed GUÍA, a bi-lingual web-based platform that facilitates disclosure of GT results. The NYCKidSeq randomized controlled trial evaluated GUÍA\'s impact on understanding of GT results.
    UNASSIGNED: NYCKidSeq enrolled diverse children with neurologic, cardiac, and immunologic conditions who underwent GT. Families were randomized to genetic counseling with GUÍA (intervention) or standard of care (SOC) genetic counseling for results disclosure. Parents/legal guardians (participants) completed surveys at baseline, post-results disclosure, and 6-months later. Survey measures assessed the primary study outcomes of perceived understanding of and confidence in explaining their child\'s GT results and the secondary outcome of objective understanding. We used regression models to evaluate the association between the intervention and the study outcomes.
    UNASSIGNED: The analysis included 551 participants, 270 in the GUÍA arm and 281 in SOC. Participants\' mean age was 41.1 years and 88.6% were mothers. Most participants were Hispanic/Latino(a) (46.3%), White/European American (24.5%), or Black/African American (15.8%). Participants in the GUÍA arm had significantly higher perceived understanding post-results (OR=2.8, CI[1.004,7.617], P=0.049) and maintained higher objective understanding over time (OR=1.1, CI[1.004, 1.127], P=0.038) compared to those in the SOC arm. There was no impact on perceived confidence. Hispanic/Latino(a) individuals in the GUÍA arm maintained higher perceived understanding (OR=3.9, CI[1.6, 9.3], P=0.003), confidence (OR=2.7, CI[1.021, 7.277], P=0.046), and objective understanding (OR=1.1, CI[1.009, 1.212], P=0.032) compared to SOC .
    UNASSIGNED: This trial demonstrates that GUÍA positively impacts understanding of GT results in diverse parents of children with suspected genetic conditions. These findings build a case for utilizing GUÍA to deliver complex and often ambiguous genetic results. Continued development and evaluation of digital applications in diverse populations are critical for equitably scaling GT offerings in specialty clinics.
    UNASSIGNED: Clinicaltrials.gov identifier NCT03738098.
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  • 文章类型: Journal Article
    目的:基因检测后的准确和可理解的信息对患者至关重要,家庭成员,和专业人士一样。
    方法:作为临床测序证据生成研究(CSER)联盟的跨站点研究的一部分,我们在基因检测结果披露后五至七个月调查了患者和家庭成员的信息寻求实践,评估各种信息源的感知效用,比如家人和朋友,医疗保健提供者,支持团体,和互联网。
    结果:我们发现,个人对从遗传学专业人员和医护人员那里获得的信息非常重视,独立于基因检测结果病例分类为阳性,不确定,或否定。互联网也被高度利用和排名。研究参与者认为,与不确定或负面结果相比,某些信息源对积极结果更有用。强调对于接收不确定或负面结果的个人,可能很难识别有用的信息。来自非英语使用者的数据很少,强调需要制定战略来接触这一人口。
    结论:我们的研究强调临床医生需要在基因检测后向来自不同人群的个体提供准确和可理解的信息。
    Accurate and understandable information after genetic testing is critical for patients, family members, and professionals alike.
    As part of a cross-site study from the Clinical Sequencing Evidence-Generating Research consortium, we investigated the information-seeking practices among patients and family members at 5 to 7 months after genetic testing results disclosure, assessing the perceived utility of a variety of information sources, such as family and friends, health care providers, support groups, and the internet.
    We found that individuals placed a high value on information obtained from genetics professionals and health care workers, independent of genetic testing result case classifications as positive, inconclusive, or negative. The internet was also highly utilized and ranked. Study participants rated some information sources as more useful for positive results compared with inconclusive or negative outcomes, emphasizing that it may be difficult to identify helpful information for individuals receiving an uncertain or negative result. There were few data from non-English speakers, highlighting the need to develop strategies to reach this population.
    Our study emphasizes the need for clinicians to provide accurate and comprehensible information to individuals from diverse populations after genetic testing.
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  • 文章类型: Journal Article
    未经ASSIGNED:由于其低成本,侵入性较小,和现成的可用性,阿尔茨海默病的血浆生物标志物已被提议作为临床试验和研究的一次性筛选工具。一氧化氮因子对这些生物标志物的影响很少受到关注。当前的横断面研究调查了Aβ40,Aβ42,总tau(ttau)的水平,和神经丝光(NfL)在基于社区的老年人队列中,对美国三个主要的小鼠组进行诊断。
    未经评估:共有1,862名参与者(852名墨西哥裔美国人(MA);775名非西班牙裔白人(NHW),和235非洲裔美国人(AA))来自健康与衰老大脑研究-健康差异(HABS-HD)研究。使用经共识审查验证的算法(决策树)分配诊断。使用Simoa技术测定血浆样品。使用ANOVA协方差性别和年龄,比较了三个认知诊断中每个生物标志物的水平。
    UNASSIGNED:在认知损害的每个水平上,各组之间都发现了显著差异。与认知未受损的MA或NHW相比,认知未受损(CU)AA的每种生物标志物的水平均显着较低,而NHW的Aβ40和NfL水平高于其他两组。MA的ttau高于AA或NHW。轻度认知障碍(MCI)组NHW在所有生物标志物中的水平最高,AA最低。NHW和MA的Aβ40,Aβ42和ttau水平较高,两组之间的Aβ42没有差异。NHW有明显较高水平的Aβ40,ttau,NfL比AA。对于CUMCI,AA的Aβ42/Aβ40比率高于NHW或MA。
    UNASSIGNED:使用认知功能减退的血浆生物标志物是有希望的,因为它们优于其他生物标志物,如CSF和成像,但正如目前的研究表明,为了提高准确性和实用性,必须考虑药物的差异。需要通过测定平台为每种生物标志物开发特定于乙醇的切点并建立规范范围。评估认知衰退期间生物标志物变化的纵向研究正在进行中。
    UNASSIGNED: Due to their low cost, less invasive nature, and ready availability, plasma biomarkers of Alzheimer\'s disease have been proposed as one-time screening tools for clinical trials and research. The impact of ethnoracial factors on these biomarkers has received little attention. The current cross-sectional study investigated the levels of Aβ40, Aβ42, total tau (t tau), and neurofilament light (NfL) across diagnoses for each of the three major ethnoracial groups in the United States in a community-based cohort of older adults.
    UNASSIGNED: A total of 1,862 participants (852 Mexican Americans (MAs); 775 non-Hispanic Whites (NHWs), and 235 African Americans (AAs)) drawn from The Health & Aging Brain Study-Health Disparities (HABS-HD) study were included. Diagnoses were assigned using an algorithm (decision tree) verified by consensus review. Plasma samples were assayed using Simoa technology. Levels of each biomarker were compared for the three ethnoracial groups across cognitive diagnoses using ANOVA covarying sex and age.
    UNASSIGNED: Significant differences were found across the groups at each level of cognitive impairment. Cognitively unimpaired (CU) AA had significantly lower levels of each of the biomarkers than cognitively unimpaired MA or NHW and NHW had higher levels of Aβ40, and NfL than the other two groups. MA had higher t tau than AA or NHW. Mild cognitive impairment (MCI) group NHW had the highest levels on all the biomarkers and AA had the lowest. NHW and MA have higher levels of Aβ40, Aβ42, and t tau there was no difference between the groups for Aβ42. NHW had significantly higher levels of Aβ40, t tau, and NfL than AA. AA had a higher Aβ42/Aβ40 ratio than either NHW or MA for CU MCI.
    UNASSIGNED: The use of plasma biomarkers of cognitive decline is promising given their advantages over other biomarkers such as CSF and imaging but as the current research shows, ethnoracial differences must be considered to enhance accuracy and utility. Developing ethnoracial-specific cut points and establishing normative ranges by assay platform for each of the biomarkers are needed. Longitudinal research to assess changes in biomarkers during a cognitive decline is ongoing.
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  • 文章类型: Journal Article
    乳腺密度最大的女性,癌症风险比密度最低的女性高4到6倍。这项横断面研究评估了两个不同种族的累积乳房X线摄影密度与人群中各自年龄特异性乳腺癌发病率的关联。该研究比较了四个队列的200名女性,年龄分别为35至49岁和50至74岁,分别代表犹太和阿拉伯种族。乳腺密度测量是从筛查乳房X线照片计算的,使用阈值软件(积云)。从国家癌症登记处获得乳腺癌特定发病率值。50至74岁女性的乳房X线摄影密度百分比低于35至49岁,犹太人:11.7vs23.1,阿拉伯人:11.6vs18.3。相比之下,累积密度随着年龄的增长而增加,从37.30到181.24的犹太人,相比之下,阿拉伯人为21.26至108.03。以色列人口中每10万人的乳腺癌发病率也有类似的趋势,犹太人从92.95增加到381.91,相比之下,阿拉伯人为48.6至244.44。将队列的累积密度与人群中各自的年龄特异性乳腺癌发病率进行比较,得出了高度显着的相关性:犹太人;r=.97,P<.0001,阿拉伯人:r=.86,P=.007。在累积密度的对数和癌症发病率的对数之间发现了很强的关联,也是。我们的研究确定了两个不同人群中累积乳腺摄影密度与乳腺癌发病率之间的相关性。这些发现应促使研究提高我们对乳腺癌发病机制的认识,并导致对预防措施的新见解。
    Women with the most extensive breast density, have a 4- to 6-fold higher cancer risk than women with the lowest density. This cross-sectional study evaluated associations of cumulative mammographic density in two distinct ethnic groups with the respective age-specific breast cancer incidences in the population. The study compared four cohorts of 200 women each aged 35 to 49 and 50 to 74, representing Jewish and Arab ethnicity. Breast density measures were calculated from screening mammograms, using a thresholding software (Cumulus). Breast cancer specific incidence values were obtained from the National Cancer Registry. The percent mammographic density was lower for women aged 50 to 74 than 35 to 49 years, both for Jews: 11.7 vs 23.1 and for Arabs: 11.6 vs 18.3. In contrast, the cumulative density increased with age, from 37.30 to 181.24 in Jews, compared to 21.26 to 108.03 in Arabs. Similar trends in breast cancer incidence rates per 100 000 in the Israeli population were apparent, with an increase from 92.95 to 381.91 in Jews, compared to 48.6 to 244.44 in Arabs. Comparing cumulative density of the cohort with respective age-specific breast cancer incidence in the population yielded a highly significant correlation: Jews; r = .97, P < .0001 and Arabs: r = .86, P = .007. A strong association was found between the log of cumulative density and the log of cancer incidence, as well. Our study identified correlations between cumulative mammographic density and breast cancer incidence in two distinct populations. The findings should prompt research to enhance our understanding of the pathogenesis of breast cancer, and lead to novel insights into measures of prevention.
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  • 文章类型: Journal Article
    γ-氨基丁酸A型(GABAA)受体主要介导γ-氨基丁酸的作用,它是中枢神经系统的主要抑制性神经递质。大量证据表明GABAA受体在睡眠调节过程中起关键作用。没有遗传关联研究探索GABAA受体基因与睡眠持续时间之间的关系,睡眠质量,和人类的睡眠时间。
    我们确定了GABAA受体基因GABRA1,GABRA2,GABRB3,GABRA5和GABRG3中的单核苷酸多态性(SNP)与睡眠持续时间之间的关联。睡眠质量,以及台湾生物库的睡眠时间,样本为10,127名台湾受试者。原始研究队列中有10,142名受试者。我们排除了15名具有镇静催眠药用药史的受试者。
    我们的数据揭示了GABRB3-GABRA5-GABRG3基因簇与睡眠持续时间的关联,先前尚未确定:GABRB3中的rs79333046(β=-0.07;P=1.21×10-3),GABRA5中的rs189790076(β=0.92;P=1.04×10-3)和GABRG3中的rs147619342(β=-0.72;P=3.97×10-3)。在Bonferroni校正后,GABRA5中的rs189790076与睡眠持续时间之间的关联仍然显着。还发现GABRB3中的变体(rs12438141)充当潜在的表达数量性状基因座。此外,我们发现GABRB3-GABRA5-GABRG3基因簇中的变异与生活方式因素之间的相互作用,例如茶和咖啡的消费,吸烟,和身体活动,影响睡眠持续时间,尽管Bonferroni校正后一些相互作用变得不显著。我们还发现GABRB3,GABRA5和GABRG3之间的相互作用会影响睡眠时间。此外,我们确定了GABRA5中rs7165524(β=-0.06;P=2.20×10-3)与睡眠质量的关联以及GABRB3中rs79465949(β=-0.12;P=3.95×10-3)与睡眠时间的关联,尽管Bonferroni校正后这些关联变得不显著。然而,我们在GABRA1和GABRA2中未检测到个体SNP相关的证据.
    我们的结果表明,GABRA5中的rs189790076以及GABRB3,GABRA5和GABRG3之间的基因-基因相互作用可能会导致台湾人群的睡眠持续时间。
    Gamma-aminobutyric acid type A (GABAA) receptors mainly mediate the effects of gamma-aminobutyric acid, which is the primary inhibitory neurotransmitter in the central nervous system. Abundant evidence suggests that GABAA receptors play a key role in sleep-regulating processes. No genetic association study has explored the relationships between GABAA receptor genes and sleep duration, sleep quality, and sleep timing in humans.
    We determined the association between single-nucleotide polymorphisms (SNPs) in the GABAA receptor genes GABRA1, GABRA2, GABRB3, GABRA5, and GABRG3 and sleep duration, sleep quality, and sleep timing in the Taiwan Biobank with a sample of 10,127 Taiwanese subjects. There were 10,142 subjects in the original study cohort. We excluded 15 subjects with a medication history of sedative-hypnotics.
    Our data revealed an association of the GABRB3-GABRA5-GABRG3 gene cluster with sleep duration, which has not been previously identified: rs79333046 (beta = - 0.07; P = 1.21 × 10-3) in GABRB3, rs189790076 (beta = 0.92; P = 1.04 × 10-3) in GABRA5, and rs147619342 (beta = - 0.72; P = 3.97 × 10-3) in GABRG3. The association between rs189790076 in GABRA5 and sleep duration remained significant after Bonferroni correction. A variant (rs12438141) in GABRB3 was also found to act as a potential expression quantitative trait locus. Additionally, we discovered interactions between variants in the GABRB3-GABRA5-GABRG3 gene cluster and lifestyle factors, such as tea and coffee consumption, smoking, and physical activity, that influenced sleep duration, although some interactions became nonsignificant after Bonferroni correction. We also found interactions among GABRB3, GABRA5, and GABRG3 that affected sleep duration. Furthermore, we identified an association of rs7165524 (beta = - 0.06; P = 2.20 × 10-3) in GABRA5 with sleep quality and an association of rs79465949 (beta = - 0.12; P = 3.95 × 10-3) in GABRB3 with sleep timing, although these associations became nonsignificant after Bonferroni correction. However, we detected no evidence of an association of individual SNPs in GABRA1 and GABRA2.
    Our results indicate that rs189790076 in GABRA5 and gene-gene interactions among GABRB3, GABRA5, and GABRG3 may contribute to sleep duration in the Taiwanese population.
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  • 文章类型: Journal Article
    Sleep is a key factor for health-related quality of life since sleep disturbances are a significant and common problem for patients with various human diseases such as psychiatric disorders. While single nucleotide polymorphisms (SNPs) in circadian clock genes have been indicated to be associated with sleep duration, most of the association studies have been investigated in populations with European ancestry. It is believed that no studies have been conducted to investigate a link between sleep duration and the circadian clock genes RORA and RORB, which play a key role, with NR1D1, in an additional feedback loop for the circadian rhythm machinery.
    In this study, we assessed the relationships between sleep duration and SNPs in the circadian clock genes NR1D1, RORA, and RORB in the Taiwan Biobank with a sample of 10,112 Taiwanese subjects.
    From our data, we revealed a novel significant association in sleep duration with the rs75981965 SNP (P = 9.93 × 10-5) in the RORA gene that has not been previously identified. The association of sleep duration with this SNP remained significant after performing Bonferroni correction. RORA is a potential candidate for sleep duration as RORA has been suggested to play a key role in the regulation of sleep disorders. Additionally, we pinpointed the effects of interactions between RORA rs75981965 and environmental factors such as tea consumption (P = 0.0015), coffee consumption (P = 0.0029), physical activity (P = 0.011), alcohol consumption (P = 0.0146), and smoking (P = 0.0223) in influencing sleep duration. We also found interactions between RORA and NR1D1 (P = 0.0023) as well as between RORA and RORB (P = 0.0061) in affecting sleep duration.
    Our results indicate that the circadian clock gene RORA may contribute to sleep duration independently as well as through gene-gene and gene-environment interactions in the Taiwanese population.
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  • 文章类型: Journal Article
    UNASSIGNED: Chronic kidney disease (CKD) is common and disproportionally burdens United States ethnic minorities. Its genetic determinants may differ by disease severity and clinical stages. To uncover genetic factors associated CKD severity among high-risk ethnic groups, we performed genome-wide association studies (GWAS) in diverse populations within the Population Architecture using Genomics and Epidemiology (PAGE) study.
    UNASSIGNED: We assembled multi-ethnic genome-wide imputed data on CKD non-overlapping cases [4,150 mild to moderate CKD, 1,105 end-stage kidney disease (ESKD)] and non-CKD controls for up to 41,041 PAGE participants (African Americans, Hispanics/Latinos, East Asian, Native Hawaiian, and American Indians). We implemented a generalized estimating equation approach for GWAS using ancestry combined data while adjusting for age, sex, principal components, study, and ethnicity.
    UNASSIGNED: The GWAS identified a novel genome-wide associated locus for mild to moderate CKD nearby NMT2 (rs10906850, p = 3.7 × 10-8) that replicated in the United Kingdom Biobank white British (p = 0.008). Several variants at the APOL1 locus were associated with ESKD including the APOL1 G1 rs73885319 (p = 1.2 × 10-9). There was no overlap among associated loci for CKD and ESKD traits, even at the previously reported APOL1 locus (p = 0.76 for CKD). Several additional loci were associated with CKD or ESKD at p-values below the genome-wide threshold. These loci were often driven by variants more common in non-European ancestry.
    UNASSIGNED: Our genetic study identified a novel association at NMT2 for CKD and showed for the first time strong associations of the APOL1 variants with ESKD across multi-ethnic populations. Our findings suggest differences in genetic effects across CKD severity and provide information for study design of genetic studies of CKD in diverse populations.
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  • 文章类型: Journal Article
    Digital informed consent may better inform individuals about health research and increase participation. In the United States and elsewhere, minorities and rural populations are underrepresented in health research and may benefit from well-designed electronic informed consent (eIC). Seven focus groups were conducted with 50 Caucasian, African American, and rural patients in the United States. Participants were asked their preferences for a paper versus electronic informed consent document. Participants found the e-version easier to use, more interesting, and better for understanding. Minority participants emphasized limited access, computer literacy, and trust barriers to eIC. Rural participants were concerned about accessibility, connectivity, privacy, and confidentiality. People see value in electronic consenting. Researchers should consider barriers to eIC among underrepresented populations before recruitment.
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