Truncating variant

截断变体
  • 文章类型: Case Reports
    羊水过多有时可由遗传缺陷引起。然而,在特定病例中建立准确的诊断并提供精确的产前咨询仍然是产科医生面临的巨大挑战。为了揭示连续两次怀孕中羊水过多的遗传原因,我们对第二个患病胎儿的DNA进行了全外显子组测序,他们的父母,并有针对性地对这个家庭的其他成员进行Sanger测序。我们在MTM1基因中发现了一个半合子截短变异体,c.438_439del(p。H146Qfs*10)在这个中国家庭中。根据分子的发现,胎儿的临床表型被认为非常适合X连锁肌管肌病(XLMTM)。中国人群中MTM1相关XLMTM的产前表现尚无相关研究,这是第一个介绍。虽然羊水过多的病因很复杂,WES可能为我们提供了产前诊断的创造性途径。
    Polyhydramnios can be caused by genetic defects at times. However, to establish an accurate diagnosis and provide a precise prenatal consultation in a given case is still a great challenge toward obstetricians. To uncover the genetic cause of polyhydramnios in the two consecutive pregnancies, we performed whole-exome sequencing of DNA for the second suffering fetuses, their parents, and targeted sanger sequencing of other members of this family. We discovered a hemizygous truncating variant in MTM1 gene, c.438_439 del (p. H146Q fs*10) in this Chinese family. In the light of the molecular discoveries, the fetus\'s clinical phenotype was considered to be a good fit for X-linked myotubular myopathy (XLMTM). There is no related research to the prenatal manifestations of MTM1-related XLMTM among Chinese population, and this is the first one to present. Though the etiology of polyhydramnios is complicated, WES may provide us with a creative avenue in prenatal diagnosis.
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  • 文章类型: Case Reports
    孤立性脑室增宽的产前患病率为0.039%-0.087%。大多数孤立的轻度脑室增宽(MV)胎儿(>90%)具有良好的预后。然而,患有孤立性MV的胎儿中有5.6%至7.9%的胎儿具有不良的神经发育结局。在这项研究中,我们报道了第一例产前SnijdersBlok-Fisher综合征(OMIM:#618604),该综合征是由POU3F3的截断变异体(OMIM:*602480)在胎儿中引起的,其具有短暂的双侧孤立MV。核型分析结果,染色体微阵列分析,胎儿TORCH感染评价均为阴性。然而,NM_006236.3(POU3F3):c.640C>T[rs1254251078]p.(Q214*)的从头可能致病性无义变体通过全外显子组测序(WES)鉴定。尽管有足够的遗传咨询,母亲拒绝进行进一步的脑磁共振成像(MRI),并决定保留胎儿。她通过足月阴道分娩生下了一名男婴。通过长期随访,不幸的是,婴儿逐渐出现运动发育迟缓。先证者的出生后脑MRI显示call体发育不良和脑室肿大。考虑到此类病例误诊的可能性很高,我们进一步总结了19例报道的POU3F3变异患者的产前表型.结果显示14例患者产前超声表现正常,而仅约26.32%的胎儿表现出MV或囊肿,而没有结构畸形。因此,我们的发现扩展了POU3F3的变异谱,并表明当胎儿分离出双侧MV时,进行WES和脑MRI的重要性。
    The prenatal prevalence of isolated ventriculomegaly is 0.039%-0.087%. Most isolated mild ventriculomegaly (MV) fetuses (>90%) have a favorable prognosis. However, 5.6% to 7.9% of fetuses with isolated MV have adverse neurodevelopmental outcomes. In this study, we reported the first case of prenatal Snijders Blok-Fisher syndrome (OMIM: #618604) caused by a truncating variant of POU3F3 (OMIM: *602480) in a fetus with transient isolated bilateral MV. The results of karyotype analysis, chromosomal microarray analysis, and TORCH infection evaluation for the fetus were all negative. However, a de novo likely pathogenic nonsense variant of NM_006236.3 (POU3F3): c.640C > T [rs1254251078] p.(Q214*) was identified by whole-exome sequencing (WES). Despite sufficient genetic counseling, the mother refused to undertake further brain magnetic resonance imaging (MRI) and decided to keep the fetus. She gave birth to a male infant through a full-term vaginal delivery. With a long-term follow-up, the infant unfortunately gradually presented with delayed motor development. The postnatal brain MRI of the proband showed dysplasia of the corpus callosum and ventriculomegaly. Considering the high probability of misdiagnosis for such cases, we further summarized the prenatal phenotypes from 19 reported patients with variants in POU3F3. The results revealed that 14 patients displayed a normal prenatal ultrasonographic manifestation, while only approximately 26.32% of fetuses showed MV or cysts without structural deformity. Thus our findings expand the variant spectrum of POU3F3 and suggest the importance of undertaking WES and brain MRI when the fetus has isolated bilateral MV.
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  • 文章类型: Case Reports
    背景:SMC1A的致病性截短变体,位于染色体Xp11.2,已知会导致婴儿发作性癫痫和女孩严重的智力残疾。一些研究报告了SMC1A截断与癫痫发作聚类之间的相关性;然而,相关的脑电图(EEG)模式仍然未知。
    方法:我们调查了一名12岁女孩,她在4个月大的时候出现了癫痫。病人起病不明,强直-阵挛性癫痫发作,每周发生几次。她在2岁时的发作间脑电图显示阵发性,广义的,高振幅慢波,而癫痫样放电很少。患者的发作间脑电图逐渐恶化;在11岁时,弥漫性连续尖峰波放电主要在左颞区观察到,在清醒状态下尤为明显。虽然发病未知,在多种抗癫痫药物下每周持续发作一次,患者自9岁起没有出现癫痫聚集性发作.全基因组测序揭示了SMC1A中从头已知的无义变体(c.2923C>T,p.R975*)。
    结论:我们的患者在婴儿期和儿童早期出现发作间脑电图轻度异常,尽管癫痫发作频繁。值得注意的是,随着时间的推移,患者的脑电图检查结果逐渐恶化,这与癫痫发作聚集的改善不一致。
    BACKGROUND: Pathogenic truncating variants in SMC1A, which is located on chromosome Xp11.2, are known to cause infantile-onset epilepsy and severe intellectual disability in girls. Several studies have reported a correlation between SMC1A truncations and seizure clustering; however, the associated electroencephalogram (EEG) patterns remain largely unknown.
    METHODS: We investigated an 12-year-old girl who had developed epilepsy at the age of 4 months. The patient experienced unknown onset, tonic-clonic seizures that occurred in clusters several times a week. Her interictal EEG at the age of 2 years showed paroxysmal, generalized, high-amplitude slow waves, whereas epileptiform discharges were scarce. The patient\'s interictal EEG gradually deteriorated; at the age of 11 years, diffuse continuous spike-and-wave discharges were predominantly observed in the left temporal region and were particularly obvious in the awake state. Although the unknown onset, tonic seizures occurring weekly persisted under multiple antiepileptic medications, the patient did not experience seizure clustering since the age of 9 years. Whole-genome sequencing revealed a de novo known nonsense variant in SMC1A (c.2923C > T, p.R975*).
    CONCLUSIONS: Our patient presented with a mild abnormality in the interictal EEG during infancy and early childhood despite frequent seizure clustering. Notably, the patient\'s EEG findings gradually deteriorated over time, which was inconsistent with the amelioration of seizure clustering.
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