Sulfide

硫化物
  • 文章类型: Journal Article
    我们对某些具有通式I2-II-IV-VI4的类金刚石材料的整体不稳定性指数(G)值的计算表明,该结构可能不稳定或确定不正确。要计算给定化合物的G值,必须首先使用晶体结构计算键合价和(BVS)。具有高G值的化合物的两个例子,根据文献中的数据,是Wurtz-锡矿型双铜镉硅四硫化物(Cu2CdSiS4)和锡矿型双铜汞四硫化物(Cu2HgSnS4),分别于1967年和1965年首次报道。在本研究中,Cu2CdSiS4和Cu2HgSnS4在1000和900°C下通过固态合成制备,分别。通过粉末X射线衍射评估相纯度。光学漫反射UV/Vis/NIR光谱分别用于估计Cu2CdSiS4和Cu2HgSnS4的2.52和0.83eV的光学带隙。使用单晶X射线衍射数据对结构进行解析和细化。证实了Cu2CdSiS4的构造类型,其中Cd2+,Si4和三个晶体学上独特的S2-离子中的两个位于镜平面上。同时验证了Cu2HgSnS4的结构类型,所有离子都位于特殊位置。S2-离子位于镜像平面上,Cu+离子位于四重旋转反转轴上,Hg2+和Sn4+离子位于四重旋转反转轴的交点上,一个镜像平面和一个双旋转轴。利用这里解析和细化的晶体结构,重新评估G值,发现G值在表明稳定晶体结构的合理应变的范围内。这项工作,以及从文献中收集的一些例子,表明,在现代仪器上收集的准确数据应用于可靠地计算BVSs和G值。
    Our calculations of the global instability index (G) values for some diamond-like materials with the general formula I2-II-IV-VI4 have indicated that the structures may be unstable or incorrectly determined. To compute the G value of a given compound, the bond valence sums (BVSs) must first be calculated using a crystal structure. Two examples of compounds with high G values, based on data from the literature, are the wurtz-stannite-type dicopper cadmium silicon tetrasulfide (Cu2CdSiS4) and the stannite-type dicopper mercury tin tetrasulfide (Cu2HgSnS4), which were first reported in 1967 and 1965, respectively. In the present study, Cu2CdSiS4 and Cu2HgSnS4 were prepared by solid-state synthesis at 1000 and 900 °C, respectively. The phase purity was assessed by powder X-ray diffraction. Optical diffuse reflectance UV/Vis/NIR spectroscopy was used to estimate the optical bandgaps of 2.52 and 0.83 eV for Cu2CdSiS4 and Cu2HgSnS4, respectively. The structures were solved and refined using single-crystal X-ray diffraction data. The structure type of Cu2CdSiS4 was confirmed, where Cd2+, Si4+ and two of the three crystallographically unique S2- ions lie on a mirror plane. The structure type of Cu2HgSnS4 was also verified, where all ions lie on special positions. The S2- ion resides on a mirror plane, the Cu+ ion is situated on a fourfold rotary inversion axis and both the Hg2+ and the Sn4+ ions are located on the intersection of a fourfold rotary inversion axis, a mirror plane and a twofold rotation axis. Using the crystal structures solved and refined here, the G values were reassessed and found to be in the range that indicates reasonable strain for a stable crystal structure. This work, together with some examples gathered from the literature, shows that accurate data collected on modern instrumentation should be used to reliably calculate BVSs and G values.
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  • 文章类型: Journal Article
    深海热液烟囱的生物活动是由化学营养微生物驱动的,这些微生物从排出的高温流体中代谢化学物质。了解这种环境中的分类学和微生物微观结构是微古生物学和古生态学研究的必要条件。这项研究检查了最近来自罗马遗址热液喷口的黑人吸烟者的化石微生物和相关的微观结构,巴布亚新几内亚近海的东马努斯盆地。尽管所检查的硫化物烟囱的中心由高温矿物学(黄铜矿和树枝状闪锌矿)主导,丝状和球形生物形态发生在外部,热液和海水混合的暖区,这表明它们在重晶石-黄铁矿共沉淀物的胶体和肉毒黄铁矿中的存在。根据在高温栖息地中的存在,两种形态类型都可以解释为嗜热微生物。它们单独(非共生)的发生暗示了对微环境条件的敏感性,这是预期的高温,pH值,和深海热液烟囱壁上的氧化还原梯度。虽然两种形态都经历了温和的热套印,存在分类差异:(i)丝状化石中细胞留下的空间主要由二氧化硅填充,Whereasinter/externalfeatures(crosswalls/septaeandoutershiaths)arepyrized;(ii)coccoidalfossilesshowbothsilica-andydromite-invilledinteriors,和一般更好的保存细胞壁。这些不同的表现可能与微环境因素和生物因素之间的相互作用有关,潜在的对比代谢,以及不同细菌和/或古细菌的细胞壁化学差异。进一步的假设是,球形特征代表生物膜形成生物,其有机物衍生物有助于形成紧密相关的波浪状和皱纹碳质层状结构,这些层状结构至少可以与周围黄铁矿的质地区分开。因此,所提供的数据提供了证据,表明来自热液系统的微生物群的微观结构对于古生物学研究与来自沉积环境的微生物群具有相似的意义。
    Biological activity at deep-sea hydrothermal chimneys is driven by chemotrophic microorganisms that metabolize chemicals from the venting high-temperature fluids. Understanding taphonomy and microbial microtextures in such environments is a necessity for micropaleontological and palaeoecological research. This study examines fossilized microorganisms and related microtextures in a recent black smoker from the Roman Ruins hydrothermal vent site, Eastern Manus Basin offshore of Papua New Guinea. Whereas the center of the examined sulfide chimney is dominated by high-temperature mineralogy (chalcopyrite and dendritic sphalerite), filamentous and coccoidal biomorphs occur in an outer, warm zone of mixing between hydrothermal fluids and seawater, which is indicated by their occurrence within colloform and botryoidal pyrite of barite-pyrite coprecipitates. Both morphotypes can be interpreted as thermophilic microorganisms based on their occurrence in a high-temperature habitat. Their separate (non-commensal) occurrence hints at sensitivities to microenvironmental conditions, which is expectable for strong temperature, pH, and redox gradients at the walls of deep-sea hydrothermal chimneys. Whereas both morphotypes experienced mild thermal overprint, taphonomic differences exist: (i) spaces left by cells in filamentous fossils are predominately filled by silica, whereas inter/extracellular features (crosswalls/septae and outer sheaths) are pyritized; (ii) coccoidal fossils show both silica- and pyrite-infilled interiors, and generally better preservation of cell walls. These different manifestations presumably relate to an interplay between microenvironmental and biological factors, potentially contrasting metabolisms, and differences in cell wall chemistries of distinct bacteria and/or archaea. A further hypothesis is that the coccoidal features represent biofilm-forming organisms, whose organic matter derivates contributed to the formation of intimately associated wavy and wrinkly carbonaceous laminations that are at least locally distinguishable from the texture of the surrounding pyrite. Hence, the presented data provide evidence that microtextures of microbiota from hydrothermal systems can have a similar significance for palaeobiological research as those from sedimentary environments.
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  • 文章类型: Journal Article
    与大多数脊椎动物相比,Trachemys和Chrysemys属的淡水海龟长期完全缺氧。这种非凡的耐受性使它们成为理想的AugustKrogh模型动物,以研究适应缺氧生存。气体发射器一氧化氮(NO)和硫化氢(H2S)及其代谢衍生物在调节对缺氧的生理反应中至关重要。这里,我们探索了这些信号分子在淡水龟缺氧耐受性中的作用,包括代谢抑制和保护免受缺氧的氧化损伤。我们描述了NO和H2S与蛋白质硫醇的相互作用,特别是如何调节中枢代谢酶的功能。这些相互作用有助于代谢抑制和防止缺氧造成的氧化损伤。此外,NO和H2S与亚铁和铁血红素铁相互作用,分别,影响中枢血红素蛋白的活性。在海龟中,这些相互作用有助于调节线粒体中的氧消耗,以及缺氧时的血管张力和血流量。NO和H2S的多种生物学作用强调了这些挥发性信号分子在淡水海龟对缺氧的显着耐受性中的重要性。
    In contrast to most vertebrates, freshwater turtles of the genera Trachemys and Chrysemys survive total oxygen deprivation for long periods of time. This remarkable tolerance makes them ideal August Krogh\'s model animals to study adaptions to survive oxygen deprivation. The gasotransmitters nitric oxide (NO) and hydrogen sulfide (H2S) and their metabolic derivatives are central in regulating the physiological responses to oxygen deprivation. Here, we explore the role of these signaling molecules in the anoxia tolerance of the freshwater turtle, including metabolic suppression and protection against oxidative damage with oxygen deprivation. We describe the interaction of NO and H2S with protein thiols and specifically how this regulates the function of central metabolic enzymes. These interactions contribute both to metabolic suppression and to prevent oxidative damage with oxygen deprivation. Furthermore, NO and H2S interact with ferrous and ferric heme iron, respectively, which affects the activity of central heme proteins. In turtles, these interactions contribute to regulate oxygen consumption in the mitochondria, as well as vascular tone and blood flow during oxygen deprivation. The versatile biological effects of NO and H2S underscore the importance of these volatile signaling molecules in the remarkable tolerance of freshwater turtles to oxygen deprivation.
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  • 文章类型: Comparative Study
    氧气逐步单电子还原为水产生的活性氧(ROS)在化学和生化上与反应性硫化物(RSS)相似,该硫化物是由硫化氢单电子氧化为元素硫衍生的。ROS和RSS都是内源性产生的,并通过蛋白质硫醇发出信号。鉴于ROS和RSS之间的相似性,我们想知道现有的测量前者的方法是否也能检测到后者。这里,我们比较了五种常见ROS方法的ROS与RSS敏感性:氧化还原敏感的绿色荧光蛋白(roGFP),2\',7\'-二氢二氯荧光素,MitoSoxRed,双色红,和安培电极。所有方法都检测到RSS,或更多,对RSS比对ROS敏感。roGFP,可以说是ROS测量的“黄金标准”,对混合多硫化物H2Sn(n=1-8)的敏感性比对H2O2高200倍以上。这些发现表明,RSS在细胞内信号传导中可能比以前认识到的更为普遍,并且ROS的贡献可能被高估了。这一结论进一步得到了以下观察结果的支持:估计的每日硫代谢和ROS产生大约相等,以及自生命起源以来就存在RSS和抗氧化机制的事实。近40亿年前,早在6亿年前环境氧气上升之前。尽管ROS被认为是最具生物学相关性的氧化剂,我们的结果质疑这个范式。我们还预计我们的发现将把注意力转向新型和临床相关的抗(RSS)氧化剂的开发。
    Stepwise one-electron reduction of oxygen to water produces reactive oxygen species (ROS) that are chemically and biochemically similar to reactive sulfide species (RSS) derived from one-electron oxidations of hydrogen sulfide to elemental sulfur. Both ROS and RSS are endogenously generated and signal via protein thiols. Given the similarities between ROS and RSS, we wondered whether extant methods for measuring the former would also detect the latter. Here, we compared ROS to RSS sensitivity of five common ROS methods: redox-sensitive green fluorescent protein (roGFP), 2\', 7\'-dihydrodichlorofluorescein, MitoSox Red, Amplex Red, and amperometric electrodes. All methods detected RSS and were as, or more, sensitive to RSS than to ROS. roGFP, arguably the \"gold standard\" for ROS measurement, was more than 200-fold more sensitive to the mixed polysulfide H2Sn(n = 1-8) than to H2O2 These findings suggest that RSS may be far more prevalent in intracellular signaling than previously appreciated and that the contribution of ROS may be overestimated. This conclusion is further supported by the observation that estimated daily sulfur metabolism and ROS production are approximately equal and the fact that both RSS and antioxidant mechanisms have been present since the origin of life, nearly 4 billion years ago, long before the rise in environmental oxygen 600 million years ago. Although ROS are assumed to be the most biologically relevant oxidants, our results question this paradigm. We also anticipate our findings will direct attention toward development of novel and clinically relevant anti-(RSS)-oxidants.
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