QSPR

QSPR
  • 文章类型: Systematic Review
    顽固的指甲板感染可能是终生的问题,因为将抗真菌药物定位于感染的组织中是有问题的。在这次系统审查中,在SPIDER方法的指导下,我们从16篇文章中提取了38种化合物的化学指甲渗透数据,并使用定量结构-性质关系(QSPRs)分析数据。我们的分析表明,低分子量对于有效的指甲渗透至关重要,优选<120g/mol。有趣的是,化学极性对指甲渗透的影响很小;因此,小极性分子,有效地穿透指甲,但不是皮肤,在新的筛选后甲癣候选选择中,应将其设置为最理想的目标化学性质。
    Recalcitrant nail plate infections can be life-long problems because localizing antifungal agents into infected tissues is problematic. In this systematic review, guided by the SPIDER method, we extracted chemical nail permeation data for 38 compounds from 16 articles, and analyzed the data using quantitative structure-property relationships (QSPRs). Our analysis demonstrated that low-molecular weight was essential for effective nail penetration, with <120 g/mol being preferred. Interestingly, chemical polarity had little effect on nail penetration; therefore, small polar molecules, which effectively penetrate the nail, but not the skin, should be set as the most desirable target chemical property in new post-screen onychomycosis candidate selections.
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  • 文章类型: Journal Article
    在现代药物发现中,化学信息学和定量构效关系(QSAR)模型的结合已经成为一个强大的联盟,使研究人员能够利用机器学习(ML)技术的巨大潜力进行预测性分子设计和分析。这篇综述深入探讨了化学信息学的基本方面,阐明化学数据的复杂性和分子描述符在揭示潜在分子特性中的关键作用。分子描述符,包括2D指纹和拓扑索引,结合结构-活动关系(SAR),是开启小分子药物发现途径的关键。开发稳健的ML-QSAR模型的技术复杂性,包括特征选择,模型验证,和绩效评估,在此讨论。各种ML算法,如回归分析和支持向量机,在文本中展示了它们预测和理解分子结构与生物活性之间关系的能力。这篇综述为研究人员提供了全面的指导,提供对化学信息学之间协同作用的理解,QSAR,ML。由于拥抱这些尖端技术,预测性分子分析有望加快药物科学中新型治疗剂的发现。
    In modern drug discovery, the combination of chemoinformatics and quantitative structure-activity relationship (QSAR) modeling has emerged as a formidable alliance, enabling researchers to harness the vast potential of machine learning (ML) techniques for predictive molecular design and analysis. This review delves into the fundamental aspects of chemoinformatics, elucidating the intricate nature of chemical data and the crucial role of molecular descriptors in unveiling the underlying molecular properties. Molecular descriptors, including 2D fingerprints and topological indices, in conjunction with the structure-activity relationships (SARs), are pivotal in unlocking the pathway to small-molecule drug discovery. Technical intricacies of developing robust ML-QSAR models, including feature selection, model validation, and performance evaluation, are discussed herewith. Various ML algorithms, such as regression analysis and support vector machines, are showcased in the text for their ability to predict and comprehend the relationships between molecular structures and biological activities. This review serves as a comprehensive guide for researchers, providing an understanding of the synergy between chemoinformatics, QSAR, and ML. Due to embracing these cutting-edge technologies, predictive molecular analysis holds promise for expediting the discovery of novel therapeutic agents in the pharmaceutical sciences.
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  • 文章类型: Journal Article
    Dehalogenation is one of the highly important degradation reactions for halogenated organic compounds (HOCs) in the environment, which is also being developed as a potential type of the remediation technologies. In combination with the experimental results, intensive efforts have recently been devoted to the development of efficient theoretical methodologies (e.g. multi-scale simulation) to investigate the mechanisms for dehalogenation of HOCs. This review summarizes the structural characteristics of neutral molecules, anionic species and excited states of HOCs as well as their adsorption behavior on the surface of graphene and the Fe cluster. It discusses the key physiochemical properties (e.g. frontier orbital energies and thermodynamic properties) calculated at various levels of theory (e.g. semiempirical, ab initio, density functional theory (DFT) and the periodic DFT) as well as their connections to the reactivity and reaction pathway for the dehalogenation. This paper also reviews the advances in the linear and nonlinear quantitative structure-property relationship models for the dehalogenation kinetics of HOCs and in the mathematical modeling of the dehalogenation processes. Furthermore, prospects of further expansion and exploration of the current research fields are described in this article.
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  • 文章类型: Journal Article
    本文综述了表面活性剂的定量结构-性质关系(QSPR)研究的最新进展以及各种分子描述符的应用。介绍了表面活性剂临界胶束浓度(cmc)和表面张力(γ)的QSPR研究。通过量子化学计算研究了离子表面活性剂中的电荷分布及其对表面活性剂胶体结构和性质的影响。浊点QSPR研究的趋势(对于非离子表面活性剂),评价了表面活性剂的生物降解潜力和其他一些性能。
    This paper presents a review on recent progress in quantitative structure-property relationship (QSPR) studies of surfactants and applications of various molecular descriptors. QSPR studies on critical micelle concentration (cmc) and surface tension (gamma) of surfactants are introduced. Studies on charge distribution in ionic surfactants by quantum chemical calculations and its effects on the structures and properties of the colloids of surfactants are also reviewed. The trends of QSPR studies on cloud point (for nonionic surfactants), biodegradation potential and some other properties of surfactants are evaluated.
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