Novel variants

新颖的变体
  • 文章类型: Journal Article
    血红蛋白(Hb)变体是由于产生结构异常的珠蛋白而导致的定性异常。根据α1,α2,β中存在的突变类型对它们进行分类,Gγ,Aγ和δ珠蛋白基因。到目前为止,数据库中报告了超过1550个Hb变体。它们可能导致Hb聚合,Hb不稳定,氧亲和力改变和Hb携氧能力降低或无临床表现。在印度,种族多样性,血缘,区域变异和迁移导致存在不同的Hb变体。我们已经编译了α的所有变体,杂合的β和δ珠蛋白链,在过去的52年中,印度报道了纯合和复合杂合形式。在印度报道的63种罕见和新颖的血红蛋白变体中,22个是α-珠蛋白链变体,37个是β-珠蛋白链变体,4个是δ-珠蛋白链变体。十二个新的Hb变体(HbJRajappan,HbKoyaDora,HbRampa,HbGodavari,Hb昌迪加尔,HbDAgri,Hb勒克瑙,HbVellore,HbMidnapore,HBBijnor,在印度血统的人中发现了HbA2Tianhe和HbA2Saurashtra)。其中大多数在HPLC上被发现。一些变体,如HbTitusville,Hb下关,Hb昌迪加尔,HbDAgri,HbYaizu和HbVellore在HbS窗口中洗脱,而HbD伊朗等变体,HbSt.Louis,HbGCoushata,HbM萨斯卡通,Hb勒克瑙,HbGrange-Blanche和Hb天水显示HbA2错误升高。因此,需要仔细和系统的调查来识别它们。
    The hemoglobin (Hb) variants are qualitative abnormalities due to production of structurally abnormal globin proteins. They are categorized based on the type of mutation present in the α1, α2, β, Gγ, Aγ and δ globin genes. So far, more than 1550 Hb variants are reported in the database. They could lead to Hb polymerization, Hb instability, altered oxygen affinity and decreased oxygen-carrying capacity of Hb or have no clinical manifestations. In India, ethnic diversity, consanguinity, regional variations and migration result in the presence of different Hb variants. We have compiled all the variants of α, β and δ globin chains in heterozygous, homozygous and in compound heterozygous forms reported from India in the last 52 years. Of the 63 rare and novel hemoglobin variants reported from India, 22 were α-globin chain variants, 37 were β-globin chain variants and 4 were δ-globin chain variants. Twelve novel Hb variants (Hb J Rajappan, Hb Koya Dora, Hb Rampa, Hb Godavari, Hb Chandigarh, Hb D Agri, Hb Lucknow, Hb Vellore, Hb Midnapore, Hb Bijnor, Hb A2Tianhe and Hb A2Saurashtra) were identified among persons of Indian origin. Majority of them were picked up on HPLC. Some of the variants like Hb Titusville, Hb Shimonoseki, Hb Chandigarh, Hb D Agri, Hb Yaizu and Hb Vellore eluted in the HbS window whereas variants like HbD Iran, Hb St. Louis, Hb G Coushata, HbM Saskatoon, Hb Lucknow, Hb Grange-Blanche and Hb Tianshui showed falsely elevated HbA2. Hence, careful and systematic investigations are required to identify them.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

  • 文章类型: Review
    背景:2D型扩张型心肌病(CMD2)是一种罕见的心脏病,引起严重的心肌病,在未经治疗的患者中,新生儿发病并迅速进展为心脏代偿失调和死亡。CMD2是由RPL3L基因变异引起的常染色体隐性遗传疾病,它编码仅在骨骼肌和心肌中表达的60S核糖体蛋白,在成肌细胞的生长和融合中起着至关重要的作用。以前的报道仅将CMD2与RPL3L基因中的小重复和七个核苷酸取代相关联。
    方法:在本研究中,我们报告了一例31日龄的中国婴儿患者,患有严重扩张型心肌病(DCM),并伴有其他心脏畸形。除了先前报道的临床特征外,患者出现了以前未报告的偶发性房性早搏和一级房室传导阻滞的并发症.全外显子组测序(WES)揭示了复合杂合变体(c.80G>A(p。Gly27Asp)和c.1074dupA(p。Ala359fs*6))在RPL3L(NM_005061.3)中。后一种新的变体可能导致缺乏蛋白质产生,mRNA水平显着降低,表明这是一种功能丧失突变.
    结论:这是中国首例RPL3L相关新生儿扩张型心肌病病例报告。患者的分子确认扩大了CMD2的遗传谱,患者的CMD2D临床表现提供了有关该疾病的其他临床信息。
    Dilated cardiomyopathy type-2D (CMD2D) is a rare heart disease causing a severe cardiomyopathy with neonatal onset and rapid progression to cardiac decompensation and death in untreated patients. CMD2D is an autosomal recessive disease resulting from variants in the RPL3L gene, which encodes the 60 S ribosomal protein exclusively expressed in skeletal and cardiac muscle and plays an essential role in myoblast growth and fusion. Previous reports have only associated CMD2D with a small duplication and seven nucleotide substitution in the RPL3L gene.
    In this study, we report the case of a 31 days old Chinese infant patient with severe dilated cardiomyopathy (DCM) and rapid decompensation along with other cardiac malformations. In addition to previously reported clinical features, the patient showed the previously unreported complication of occasional premature atrial contractions and a first-degree atrioventricular block. Whole-exome sequencing (WES) revealed compound heterozygous variants (c.80G > A (p.Gly27Asp) and c.1074dupA (p.Ala359fs*6)) in RPL3L (NM_005061.3). The latter novel variant may result in the absence of protein production with a significant decrease in mRNA level, suggesting it is a loss-of-function mutation.
    This is the first case report of RPL3L-associated neonatal dilated cardiomyopathy in China. The molecular confirmation of the patient expands the genetic spectrum of CMD2D, and the clinical manifestation of CMD2D in the patient provides additional clinical information regarding this disease.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Pubmed)

  • 文章类型: Review
    儿童早期肥胖是世界范围内一个真正的公共卫生问题。确定病因,特别是可治疗和可预防的原因,可以指导卫生专业人员进行适当的管理。血清瘦素水平的测量有助于诊断先天性瘦素和瘦素受体缺乏,这被认为是儿童早期肥胖的重要罕见原因。这项研究的主要目的是调查LEP的频率,LEPR,和MC4R基因变异在埃及严重早发性肥胖患者队列中。目前的横断面研究包括30名在出生后第一年出现肥胖的儿童,BMI>2SD(年龄和性别)。被研究的患者接受了完整的病史记录,人体测量,血清瘦素和胰岛素测定,和LEP的基因检测,LEPR和MC4R。在10/30的患者中发现LEP和LEPR的致病变异,检出率为30%。八种不同的纯合变体(两种致病性,三种可能的致病性,并在这两个基因中鉴定出三个不确定显著的变体),包括六个以前未报告的LEPR变体。其中,LEPR基因中的一个新的移码变体(c.1045delT,p.S349Lfs*22)在两个不相关的家庭中反复发作,并且似乎在我们的人群中具有创始人的作用。总之,我们报道了10例新出现的瘦素和瘦素受体缺陷患者,并鉴定出6种新型LEPR变异,扩大了这一罕见疾病的突变范围.此外,这些患者的诊断有助于我们在遗传咨询和患者管理方面,特别是针对LEP和LEPR缺陷的药物的可用性.
    Early childhood obesity is a real public health problem worldwide. Identifying the etiologies, especially treatable and preventable causes, can direct health professionals toward proper management. Measurement of serum leptin levels is helpful in the diagnosis of congenital leptin and leptin receptor deficiencies which are considered important rare causes of early childhood obesity. The main aim of this study was to investigate the frequency of LEP, LEPR, and MC4R gene variants among a cohort of Egyptian patients with severe early onset obesity. The current cross-sectional study included 30 children who developed obesity during the first year of life with BMI > 2SD (for age and sex). The studied patients were subjected to full medical history taking, anthropometric measurements, serum leptin and insulin assays, and genetic testing of LEP, LEPR and MC4R. Disease causing variants in LEP and LEPR were identified in 10/30 patients with a detection rate of 30%. Eight different homozygous variants (two pathogenic, three likely pathogenic, and three variants of uncertain significant) were identified in the two genes, including six previously unreported LEPR variants. Of them, a new frameshift variant in LEPR gene (c.1045delT, p.S349Lfs*22) was recurrent in two unrelated families and seems to have a founder effect in our population. In conclusion, we reported ten new patients with leptin and leptin receptor deficiencies and identified six novel LEPR variants expanding the mutational spectrum of this rare disorder. Furthermore, the diagnosis of these patients helped us in genetic counseling and patients\' managements specially with the availability of drugs for LEP and LEPR deficiencies.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

  • 文章类型: Review
    背景:进行性家族性肝内胆汁淤积3型(PFIC3)是由ABCB4基因的致病变异引起的常染色体隐性遗传疾病。本研究旨在探讨PFIC3患者ABCB4基因型及临床表型特征。
    方法:收集并分析了PubMed和CNKI数据库中13例新发PFIC3患儿以及82例报道患儿的临床和分子遗传学数据。
    结果:13例新的PFIC3患者包括6名女性和7名男性,主要表现是肝肿大,脾肿大,黄疸,瘙痒,以及增加水平的γ-谷氨酰转肽酶(GGT)。检测到14个新的ABCB4变体,包括八个被诊断为可能致病的和六个,致病性。在所有95例PFIC3病例中,在85.3%(81/95)观察到肝肿大,瘙痒占67.4%(64/95),脾肿大52.6%(50/95),黄疸占48.4%(46/95),门静脉高压症患者占34.7%(33/95),GGT升高患者占100%(88/88)。66.1%(39/59)的患者对口服熊去氧胆酸(UDCA)治疗有不同程度的阳性反应,其中38.5%(15/39)在实验室变化方面完全恢复。尽管53例患者的病情保持稳定(58.9%,53/90),其余37例患者的临床结局不乐观(41.1%,37/90),包括7人死亡,27人经历了另3人等待肝移植。在95例患者中共检测到96种ABCB4变异。具有双等位基因无效变异的PFIC3患者表现出更早的发病年龄[10.5(2,18)与19(8,60)个月,p=0.007],较低的UDCA反应率[18.2%(2/11)与77.1%(37/48),p=0.001],和更多没有希望的临床结果[80%(12/15)与33.3%(25/75),p=0.001],与非双等位基因无效变异体相比。
    结论:PFIC3表现为肝肿大,瘙痒,以血清GGT水平升高为生化标志的脾肿大和黄疸。尽管观察到对UDCA治疗的反应有不同程度的改善,41.1%的PFIC3患者预后不良。双等位基因无效变异的ABCB4基因型与严重的PFIC3表型相关。此外,这项研究中的14个新变体扩展了ABCB4突变谱,并为PFIC3患者的诊断提供了新的分子生物标志物。
    Progressive familial intrahepatic cholestasis type 3 (PFIC3) is an autosomal recessive disease caused by pathogenic variants of the gene ABCB4. This study aimed to investigate the ABCB4 genotypic and the clinical phenotypic features of PFIC3 patients.
    The clinical and molecular genetic data of 13 new pediatric patients with PFIC3 as well as 82 reported ones in the PubMed and CNKI databases were collected and analyzed.
    The 13 new PFIC3 patients included six females and seven males, and the main presentations were hepatomegaly, splenomegaly, jaundice, and pruritus, as well as increased levels of gamma-glutamyl transpeptidase (GGT). Fourteen new ABCB4 variants were detected, including eight diagnosed to be likely-pathogenic and six, pathogenic. Among all the 95 PFIC3 cases, hepatomegaly was observed in 85.3% (81/95), pruritus in 67.4% (64/95), splenomegaly in 52.6% (50/95), jaundice in 48.4% (46/95), portal hypertension in 34.7% (33/95) and GGT elevation in 100% (88/88) of the patients. Positive responses at varied degrees to oral ursodeoxycholic acid (UDCA) treatment were observed in 66.1% (39/59) of the patients, among whom 38.5% (15/39) fully recovered in terms of the laboratory changes. Although the condition remained stable in 53 patients (58.9%, 53/90), the clinical outcomes were not promising in the rest 37 cases (41.1%, 37/90), including 7 died, 27 having undergone while another 3 waiting for liver transplantation. A total of 96 ABCB4 variants were detected in the 95 patients. PFIC3 patients with biallelic null variants exhibited earlier onset ages [10.5 (2, 18) vs. 19 (8, 60) months, p = 0.007], lower UDCA response rate [18.2% (2/11) vs. 77.1% (37/48), p = 0.001], and more unpromising clinical outcomes [80% (12/15) vs. 33.3% (25/75), p = 0.001], compared with those with non-biallelic null variants.
    PFIC3 presented with hepatomegaly, pruritus, splenomegaly and jaundice with increased serum GGT level as a biochemistry hallmark. Although varying degrees of improvement in response to UDCA therapy were observed, 41.1% of PFIC3 patients exhibited unfavorable prognosis. ABCB4 genotypes of biallelic null variants were associated with severer PFIC3 phenotypes. Moreover, the 14 novel variants in this study expanded the ABCB4 mutation spectrum, and provided novel molecular biomarkers for diagnosis of PFIC3 patients.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

  • 文章类型: Case Reports
    Zhu-Tokita-Takenouchi-Kim(ZTTK)综合征是一种新描述的常染色体显性遗传多系统发育障碍,由位于染色体区域21q22.11的SON基因突变引起。它的特点是智力残疾等异质性特征,面部畸形,喂养不良,视力异常,肌肉骨骼异常,先天性心脏和泌尿生殖系统缺陷,以及一些独特的神经系统发现,包括癫痫发作,音调异常,自闭症谱系障碍和神经影像学上发现的可变大脑异常。不幸的是,我们缺乏关于这些神经症状谱的足够信息。在这项研究中,我们报告了2例新的不相关的ZTTK综合征病例,并通过微阵列分析和全外显子组测序鉴定SON基因中的新致病变异。我们还强调了该综合征患者的神经系统表现,并讨论了收集更多有关神经系统表现的数据的重要性。特别是癫痫发作特征和长期发育进展。这些信息对于帮助了解这些患者的长期神经发育预后至关重要。
    Zhu-Tokita-Takenouchi-Kim (ZTTK) syndrome is a newly described autosomal dominant multisystem developmental disorder resulting from a mutation of the SON gene located on chromosome region 21q22.11. It is characterized by heterogeneous features such as intellectual disability, facial dysmorphisms, poor feeding, vision abnormalities, musculoskeletal anomalies, congenital heart and genitourinary system defects, as well as several unique neurological findings including seizures, tone abnormalities, autism spectrum disorder and variable brain abnormalities noted on neuroimaging. Unfortunately, we lack adequate information regarding the spectrum of these neurological symptoms. In this study, we report 2 new unrelated cases of ZTTK syndrome, and identify new pathogenic variants in the SON gene through microarray analysis and whole-exome sequencing. We also emphasize the neurological manifestations of the syndrome in our patients and discuss the significance of gathering more data regarding neurological presentation, particularly seizure characteristics and long-term developmental progression. This information will be crucial to help understand long-term neurodevelopmental prognosis in these patients.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Pubmed)

  • 文章类型: Journal Article
    描述17β羟基类固醇脱氢酶3(17βHSD3)缺乏症的亚裔印度患者,并进行系统评价以确定影响17βHSD3缺乏症引起的46,XY性发育障碍(DSD)中性别角色的因素。
    我们提供了来自我们46,XYDSD队列(N=150;印度西部)的10例17βHSD3缺乏症患者(9例先证者和1例受影响的家庭成员)的表型和基因型数据,并对152例先证者进行了系统评价,从世界文献中确定17βHSD3缺乏症患者性别角色的决定因素。
    在我们的队列中,17βHSD3缺乏症是非遗传性46,XYDSD的第三大常见原因(6%)。五名患者各有青春期前(非典型生殖器)和青春期(原发性闭经)表现。最初有六名患者被抚养为女性,其中两名(青春期前和青春期各一名)改变了性别角色。观察到10种致病分子变体(6种新型)。在系统审查中,最初的男性教养并不常见(10.5%),并且与非典型生殖器有关,较高的睾酮/雄烯二酮(T/A)比率和亚洲血统。在10.3%的最初女性抚养的患者中,性别角色向男性转变,并且与亚洲血统有关,但与青春期雄激素或分子变异严重程度无关。在欧洲血统的患者中尚未报道。
    我们报道了第一个17βHSD3缺乏症的印度病例系列,46,XYDSD的第三个最常见的原因,有六个新的分子变体。注意到在17βHSD3缺乏症中最初以女性饲养的男性初始性别饲养频率和性别角色变化对男性的差异,需要进一步评估潜在的分子机制。
    To describe Asian Indian patients with 17β hydroxysteroid dehydrogenase 3 (17βHSD3) deficiency and to perform a systematic review to determine the factors influencing gender role in 46,XY disorder of sex development (DSD) due to 17βHSD3 deficiency.
    We present the phenotypic and genotypic data of 10 patients (9 probands and 1 affected family member) with 17βHSD3 deficiency from our 46,XY DSD cohort (N = 150; Western India) and a systematic review of 152 probands with genetically proven, index 17βHSD3 deficiency patients from the world literature to identify the determinants of gender role.
    17βHSD3 deficiency was the third most common (6%) cause of non-dysgenetic 46,XY DSD in our cohort. Five patients each had prepubertal (atypical genitalia) and pubertal (primary amenorrhoea) presentations. Six patients were initially reared as female of whom two (one each in prepubertal and pubertal age) changed their gender role. Ten pathogenic molecular variants (six novel) were observed. In the systematic review, initial male sex of rearing was uncommon (10.5%) and was associated with atypical genitalia, higher testosterone/androstenedione (T/A) ratio and Asian origin. Gender role change to male was seen in 10.3% of patients with initial female sex of rearing and was associated with Asian origin but unrelated to pubertal androgens or molecular variant severity. It has not been reported in patients of European origin.
    We report the first Indian case series of 17βHSD3 deficiency, the third most common cause of 46,XY DSD, with six novel molecular variants. Distinct geographical differences in the frequency of initial male sex of rearing and gender role change to male in those initially reared as females in 17βHSD3 deficiency were noted which needs further evaluation for the underlying molecular mechanisms.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

  • 文章类型: Case Reports
    卵胞浆内单精子注射后受精失败继续影响夫妇,病因尚不清楚。
    我们对一对有2年原发原因不明的不孕症病史的夫妇进行了定性。三种不同的辅助生殖尝试(IVF+救援ICSI,ICSI和ICSI-AOA)在控制性卵巢过度刺激后显示MII卵母细胞的反复受精失败。在对这对夫妇及其家人进行全外显子组测序和sanger测序后,变异致病性使用SIFT评估,PolyPhen2,突变检测员,和人类拼接查找软件。我们鉴定了新的复合杂合突变,c.1535+3A>G和c.946C>T(p。Leu316Phe),在女性先证者的WEE2中。对变异的三重奏分析揭示了常染色体隐性遗传模式。预测WEE2中的c.1535+3A>G会破坏野生型供体位点并影响剪接,和错义突变c.946C>T(p。预计WEE2的Leu316Phe)具有致病性。
    在ICSI-AOA后反复受精失败的不育女性中发现了WEE2中的一种新的复合杂合突变。WEE2中的这些新突变为受精失败提供了遗传证据。
    Fertilization failure after intracytoplasmic sperm injection continues to affect couples and the etiology is not well-understood.
    We characterized a couple with 2-year history of primary unexplained infertility. Three different assisted reproduction attempts (IVF + rescue ICSI, ICSI and ICSI-AOA) showed repeated fertilization failure for MII oocyte retrieval after controlled ovarian hyperstimulation. After whole-exome sequencing and sanger sequencing of the couple and their family members, variant pathogenicity was assessed using SIFT, PolyPhen2, Mutation Taster, and Human Splicing Finder software. We identified novel compound heterozygous mutations, c.1535 + 3A > G and c.946C > T (p. Leu316Phe), in WEE2 in the female proband. Trios analysis of the variations revealed an autosomal recessive pattern. c.1535 + 3A > G in WEE2 was predicted to break the wild-type donor site and affect splicing, and the missense mutation c.946C > T (p. Leu316Phe) of WEE2 was predicted to be pathogenic.
    A novel compound heterozygous mutation in WEE2 was identified in an infertile female who experienced repeated fertilization failure even after ICSI-AOA. These novel mutations in WEE2 provided genetic evidence for fertilization failure.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Sci-hub)

       PDF(Pubmed)

公众号