Immunoprecipitation

免疫沉淀
  • 文章类型: Case Reports
    目的:免疫比浊法是临床生物学中的敏感技术,可能会受到基质效应的影响,钩效应或非特异性反应。其中,大量的免疫球蛋白会使检测到的信号强度失真。这项研究说明了分析干扰对临床患者管理的有害影响,并评估了最近提出的干扰调查算法的实际相关性。
    方法:在涂有小鼠抗CRP单克隆抗体的乳胶颗粒上通过液体免疫沉淀法测定C-反应蛋白(CRP)浓度,兔抗CRP多克隆抗体,通过固相免疫化学或酶测定。
    结果:在图卢兹大学医院内科对一名患有多种慢性病的75岁患者的随访中,在缓解无痛性边缘区淋巴瘤时,怀疑有严重感染,CRP血浆值超过700mg/L.由于没有感染的临床迹象,怀疑在液体免疫沉淀CRP测定中存在干扰.由于使用不同类型的抗体的其他免疫测定的正常结果,排除了由于抗小鼠自身抗体引起的干扰的假设。此外,使用固相免疫化学分析没有观察到干扰。蛋白质电泳和免疫固定记录了淋巴瘤的复发,同时存在异常的单克隆免疫球蛋白干扰了CRP的测量。
    结论:由于分析干扰,对常见临床生化参数如CRP的解释可能很困难。审查所有药物-临床-生物学数据以及与临床医生的合作对于优化患者管理至关重要。
    OBJECTIVE: Immunoturbidimetric assays are sensitive techniques in clinical biology that may be subjected to matrix effects, hook effects or aspecific reactions. Among these, large quantities of immunoglobulins can distort the intensity of the detected signal. This study illustrates the deleterious effect of analytical interference on clinical patient management, and assesses the practical relevance of a recently proposed algorithm for interference investigation.
    METHODS: Determination of C-Reactive Protein (CRP) concentration by liquid immunoprecipitation on latex particles coated with mouse anti-CRP monoclonal antibodies, rabbit anti-CRP polyclonal antibodies, by solid phase immunochemistry or by enzymatic assay.
    RESULTS: During the follow-up of a 75-year-old patient suffering from multiple chronic diseases in the Internal Medicine Department of Toulouse University Hospital, a severe infection was suspected facing a CRP plasma value over 700 mg/L while he was in remission of an indolent marginal zone lymphoma. Because of the absence of clinical signs of infection, an interference in the liquid immunoprecipitation CRP assay was suspected. The hypothesis of an interference due to anti-mouse autoantibodies was ruled out because of normal results for other immunoassays using different types of antibodies. Moreover, no interference was observed using solid phase immunochemistry assay. Protein electrophoresis and immunofixation documented a relapse of lymphoma along with the presence of abnormal monoclonal immunoglobulins interfering with CRP measurement.
    CONCLUSIONS: The interpretation of common clinical biochemistry parameters such as CRP can be difficult owing to analytical interferences. Reviewing all the pharmaco-clinico-biological data and collaboration with clinicians is of critical importance for optimal patient management.
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  • 文章类型: Journal Article
    天然产品,虽然对药物发现很有价值,遇到限制,如目标和毒性的不确定性。作为中药的重要活性成分,雷公藤红素具有广泛的生物活性,但其机制尚不清楚。在这项研究中,他们引入了一种创新的“基于降解的蛋白质谱分析(DBPP)”策略,将PROteasolsisTogetingChimeras(PROTAC)技术与定量蛋白质组学和免疫沉淀-质谱(IP-MS)技术相结合,使用降解剂工具箱识别天然产物的多个目标。以celastrol为例,他们成功地确定了已知的目标,包括核因子κB激酶亚基β(IKKβ)的抑制剂,磷脂酰肌醇-4,5-二磷酸3-激酶催化亚基α(PI3Kα),和PP2A的细胞抑制剂(CIP2A),以及潜在的新靶标,如检查点激酶1(CHK1),O-GlcNAcase(OGA),和DNA切除修复蛋白ERCC-6样(ERCC6L)。此外,在这项工作中开发了第一个糖苷酶降解剂。最后,通过在定量蛋白质组学中使用混合的PROTAC工具箱,他们还实现了雷公藤红素的多目标鉴定,显着降低成本,同时提高效率。一起来看,他们认为DBPP策略可以补充现有的目标识别策略,从而促进了制药领域的快速发展。
    Natural products, while valuable for drug discovery, encounter limitations like uncertainty in targets and toxicity. As an important active ingredient in traditional Chinese medicine, celastrol exhibits a wide range of biological activities, yet its mechanism remains unclear. In this study, they introduced an innovative \"Degradation-based protein profiling (DBPP)\" strategy, which combined PROteolysis TArgeting Chimeras (PROTAC) technology with quantitative proteomics and Immunoprecipitation-Mass Spectrometry (IP-MS) techniques, to identify multiple targets of natural products using a toolbox of degraders. Taking celastrol as an example, they successfully identified its known targets, including inhibitor of nuclear factor kappa B kinase subunit beta (IKKβ), phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha (PI3Kα), and cellular inhibitor of PP2A (CIP2A), as well as potential new targets such as checkpoint kinase 1 (CHK1), O-GlcNAcase (OGA), and DNA excision repair protein ERCC-6-like (ERCC6L). Furthermore, the first glycosidase degrader is developed in this work. Finally, by employing a mixed PROTAC toolbox in quantitative proteomics, they also achieved multi-target identification of celastrol, significantly reducing costs while improving efficiency. Taken together, they believe that the DBPP strategy can complement existing target identification strategies, thereby facilitating the rapid advancement of the pharmaceutical field.
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  • 文章类型: Case Reports
    两耐素(AMPH)自身免疫与多种神经系统并发症有关,包括脑炎,周围神经病变,脊髓病,和小脑综合征.其诊断基于临床神经功能缺损和血清抗AMPH抗体的存在。主动免疫疗法,比如静脉注射免疫球蛋白,类固醇,和其他免疫抑制疗法,据报道对大多数患者有效。然而,恢复的程度因情况而异。在这里,我们报道了一名75岁女性半快速进行性系统性震颤的病例,视觉幻觉,和烦躁。住院后,她出现了轻度发烧和认知障碍。脑磁共振成像(MRI)显示半快速进行性弥漫性脑萎缩(DCA)超过3个月,而没有观察到明显的异常强度。神经传导研究显示四肢感觉和运动神经病。固定的基于组织的测定(TBA)未能检测到抗神经元抗体;然而,基于商业免疫印迹,怀疑存在抗AMPH抗体.因此,进行血清免疫沉淀,这证实了抗AMPH抗体的存在。患者还患有胃腺癌。大剂量甲基强的松龙,并给予静脉注射免疫球蛋白并进行肿瘤切除术,导致认知障碍的解决和治疗后MRI上DCA的改善。免疫治疗和肿瘤切除后,使用免疫沉淀法分析患者的血清,显示抗AMPH抗体水平降低。这种情况值得注意,因为DCA在免疫治疗和肿瘤切除后显示出改善。此外,该病例表明,TBA阴性和商业免疫印迹阳性并不一定表示假阳性结果.
    Amphiphysin (AMPH) autoimmunity is associated with a variety of neurological complications, including encephalitis, peripheral neuropathy, myelopathy, and cerebellar syndrome. Its diagnosis is based on clinical neurological deficits and the presence of serum anti-AMPH antibodies. Active immunotherapy, such as intravenous immunoglobulins, steroids, and other immunosuppressive therapies, has been reported to be effective in most patients. However, the extent of recovery varies depending on the case. Herein, we report the case of a 75-year-old woman with semi-rapidly progressive systemic tremors, visual hallucinations, and irritability. Upon hospitalization, she developed a mild fever and cognitive impairment. Brain magnetic resonance imaging (MRI) showed semi-rapidly progressive diffuse cerebral atrophy (DCA) over 3 months, while no clear abnormal intensities were observed. The nerve conduction study revealed sensory and motor neuropathy in the limbs. The fixed tissue-based assay (TBA) failed to detect antineuronal antibodies; however, based on commercial immunoblots, the presence of anti-AMPH antibodies was suspected. Therefore, serum immunoprecipitation was performed, which confirmed the presence of anti-AMPH antibodies. The patient also had gastric adenocarcinoma. High-dose methylprednisolone, and intravenous immunoglobulin were administered and tumor resection was performed, resulting in resolution of the cognitive impairment and improvement in the DCA on the post-treatment MRI. After immunotherapy and tumor resection, the patient\'s serum was analyzed using immunoprecipitation, which showed a decrease in the level of anti-AMPH antibodies. This case is noteworthy because the DCA showed improvement after immunotherapy and tumor resection. Additionally, this case demonstrates that negative TBA with positive commercial immunoblots do not necessarily indicate false positive results.
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  • 文章类型: Case Reports
    We encountered a 30-year-old woman with remarkably elevated luteinizing hormone (LH) levels, as measured by electrochemiluminescent immunoassay (ECLIA), and no specific symptoms. We performed the following investigations: dilution linearity test, polyethylene glycol (PEG) precipitation test, immunoprecipitation test, protein G addition test, and high-performance liquid chromatography (HPLC) analysis. The linearity of patient\'s serum was similar to that of a standard LH preparation, and non-specific reactions were not observed. The recovery rate of LH shown by the PEG precipitation test, immunoprecipitation test, and protein G addition test was low. Moreover, an abnormal peak in HPLC was located at a slightly larger molecular weight position than that of IgG. These results showed the presence of macro-LH, LH, and anti-LH-IgG autoantibody complex and suggested that the clearance of LH from the blood was delayed due to IgG binding, and therefore, the LH value was falsely high. We should keep the possibility of macro-LH in mind in cases of unexpectedly high LH values.
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  • 文章类型: Case Reports
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  • 文章类型: Case Reports
    The NAA10-NAA15 (NatA) protein complex is an N-terminal acetyltransferase responsible for acetylating ~ 40% of eukaryotic proteins. In recent years, NAA10 variants have been found in patients with an X-linked developmental disorder called Ogden syndrome in its most severe form and, in other familial or de novo cases, with variable degrees of syndromic intellectual disability (ID) affecting both sexes.
    Here we report and functionally characterize a novel and de novo NAA10 (NM_003491.3) c.332 T > G p.(V111G) missense variant, that was detected by trio-based whole exome sequencing in an 11 year old girl with mild/moderate non-syndromic intellectual disability. She had delayed motor and language development, but normal behavior without autistic traits. Her blood leukocyte X-inactivation pattern was within normal range (80/20). Functional characterization of NAA10-V111G by cycloheximide chase experiments suggests that NAA10-V111G has a reduced stability compared to NAA10-WT, and in vitro acetylation assays revealed a reduced enzymatic activity of monomeric NAA10-V111G but not for NAA10-V111G in complex with NAA15 (NatA enzymatic activity).
    We show that NAA10-V111G has a reduced stability and monomeric catalytic activity, while NatA function remains unaltered. This is the first example of isolated NAA10 dysfunction in a case of ID, suggesting that the syndromic cases may also require a degree of compromised NatA function.
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  • 文章类型: Journal Article
    Bacillus subtilis possesses two glyceraldehyde-3-phosphate dehydrogenases with opposite roles, the glycolytic NAD-dependent GapA and the NADP-dependent GapB enzyme, which is exclusively required during gluconeogenesis but not active under conditions promoting glycolysis. We propose that proteins that are no longer needed will be recognized and proteolyzed by Clp proteases and thereby recycled. To test this postulation, we analyzed the stability of the glycolytic enzyme GapA and the gluconeogenetic enzyme GapB in the presence and absence of glucose. It turned out that GapA remained rather stable under both glycolytic and gluconeogenetic conditions. In contrast, the gluconeogenetic enzyme GapB was degraded after a shift from malate to glucose (i.e., from gluconeogenesis to glycolysis), displaying an estimated half-life of approximately 3 h. Comparative in vivo pulse-chase labeling and immunoprecipitation experiments of the wild-type strain and isogenic mutants identified the ATP-dependent ClpCP protease as the enzyme responsible for the degradation of GapB. However, arginine protein phosphorylation, which was recently described as a general tagging mechanism for protein degradation, did not seem to play a role in GapB proteolysis, because GapB was also degraded in a mcsB mutant, lacking arginine kinase, in the same manner as in the wild type.IMPORTANCE GapB, the NADP-dependent glyceraldehyde-3-phosphosphate dehydrogenase, is essential for B. subtilis under gluconeogenetic conditions. However, after a shift to glycolytic conditions, GapB loses its physiological function within the cell and becomes susceptible to degradation, in contrast to GapA, the glycolytic NAD-dependent glyceraldehyde-3-phosphate dehydrogenase, which remains stable under glycolytic and gluconeogenetic conditions. Subsequently, GapB is proteolyzed in a ClpCP-dependent manner. According to our data, the arginine kinase McsB is not involved as adaptor protein in this process. ClpCP appears to be in charge in the removal of inoperable enzymes in B. subtilis, which is a strictly regulated process in which the precise recognition mechanism(s) remains to be identified.
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  • 文章类型: Journal Article
    低聚通常是蛋白质实现其特定细胞功能的结构要求。例如,ryanodine受体(RyR)的四聚化对于形成功能性Ca(2)释放通道孔是必需的。这里,我们描述了评估蛋白质自缔合的详细方案,包括酵母双杂交(Y2H),共免疫沉淀(co-IP)和化学交联测定。在Y2H系统中,在共表达GAL4诱饵和测试蛋白的靶融合体中,通过β-半乳糖苷酶测定检测蛋白自身相互作用。使用在哺乳动物HEK293细胞中共表达的测试蛋白的HA-和cMyc-标记的融合物,通过co-IP进一步评估蛋白自身相互作用。在HEK293细胞中表达后,通过交联和SDS-PAGE分析检查蛋白质同源寡聚体的精确化学计量。使用这些不同但互补的技术,我们一直观察到RyRN末端结构域的自缔合,并证明了其形成四聚体的内在能力。这些方法可应用于其他哺乳动物内在膜蛋白的蛋白质-蛋白质相互作用和同源寡聚化研究。
    Oligomerization is often a structural requirement for proteins to accomplish their specific cellular function. For instance, tetramerization of the ryanodine receptor (RyR) is necessary for the formation of a functional Ca(2+) release channel pore. Here, we describe detailed protocols for the assessment of protein self-association, including yeast two-hybrid (Y2H), co-immunoprecipitation (co-IP) and chemical cross-linking assays. In the Y2H system, protein self-interaction is detected by β-galactosidase assay in yeast co-expressing GAL4 bait and target fusions of the test protein. Protein self-interaction is further assessed by co-IP using HA- and cMyc-tagged fusions of the test protein co-expressed in mammalian HEK293 cells. The precise stoichiometry of the protein homo-oligomer is examined by cross-linking and SDS-PAGE analysis following expression in HEK293 cells. Using these different but complementary techniques, we have consistently observed the self-association of the RyR N-terminal domain and demonstrated its intrinsic ability to form tetramers. These methods can be applied to protein-protein interaction and homo-oligomerization studies of other mammalian integral membrane proteins.
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  • 文章类型: Journal Article
    BACKGROUND: In polymyositis/dermatomyositis (PM/DM), anti-aminoacyl-tRNA synthetase (ARS) antibodies are closely associated with interstitial lung disease (ILD), a frequent pulmonary complication. However, the clinical significance of anti-ARS antibodies is not well established.
    OBJECTIVE: We aimed to evaluate the clinical significance of anti-ARS antibodies in PM/DM-ILD patients.
    METHODS: Forty-eight consecutive PM/DM-ILD patients were studied retrospectively. Anti-ARS antibodies were screened by ELISA and confirmed by RNA immunoprecipitation test. Medical records, high-resolution computed tomography images, and surgical lung biopsy specimens were compared between ARS-positive (ARS group) and ARS-negative patients (non-ARS group).
    RESULTS: Anti-ARS antibodies were detected in 23 of 48 patients (48%). Radiologically, nonspecific interstitial pneumonia (NSIP) pattern was observed more frequently in the ARS group than in the non-ARS group (73.9% vs. 40%, P = 0.02). Pathologically, NSIP was the most frequent in both groups. Ten-year survival rate was also significantly higher in the ARS group than in the non-ARS group (91.6% vs. 58.7%, P = 0.02). Univariate Cox hazards analysis revealed that the presence of anti-ARS antibodies was associated with better prognosis (HR = 0.34, 95% CI 0.08-0.80; P = 0.01).
    CONCLUSIONS: The presence of anti-ARS antibodies is a possible prognostic marker in patients with PM/DM-ILD.
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  • 文章类型: Case Reports
    The authors present diagnostic methods used in a young healthy person who had isolated aspartate aminotransferase elevation. Polyethylene glycol precipitation test, aspartate aminotransferase serum electrophoresis and immunofixation were performed for measuring the macro-aspartate aminotransferase. It was found that aspartate aminotransferase activity in the patient was almost completely eliminated after precipitation of immunoglobulins with polyethylene glycol. In addition, aspartate aminotransferase migrated in the control samples to the anode while in the patient towards the cathode. Finally, a wider and more intense staining band was visible in the region of immunoglobulin A in the patient sample on the immunofixation gel as compared to the control sample. The authors conclude that that increased aspartate aminotransferase activity was due to macro formation. The elevated level of immunoglobulin A and selective increase of polyclonal immunoglobulin A (κ and λ light chains) indicated that the macro format was created by immunoglobulin A bound to aspartate aminotransferase.
    A szerzők egy fiatal, egészséges egyén esetét ismertetik, akinél az izolált aszpartát-aminotranszferáz-emelkedés diagnosztikai nehézséget jelentett. A probléma megoldására polietilénglikol precipitációs tesztet, aszpartát-aminotranszferáz-szérumelektroforézist és immunfixációt alkalmaztak. Kimutatták, hogy a beteg szérummintáiban polietilénglikol-precipitációt követően az aszpartát-aminotranszferáz-aktivitás majdnem teljesen megszűnt. Az aszpartát-aminotranszferáz a kontrollmintákban az anód, míg a betegmintában a katód felé vándorolt. Immunfixációs gélen szélesebb és intenzívebben festődő csík volt látható az immunglobulin-A-régióban a betegmintában a kontrollmintához képest. Ezek a laboratóriumi tesztek megerősítették, hogy az aszpartát-aminotranszferáz-aktivitás makroformáció következményeként is megemelkedhet. Esetükben az emelkedett immunglobulin-A-szint és a szelektív poliklonális immunglobulin-A- (κ- és λ-könnyűláncok) növekedés makroformátumot jelzett, amit az aszpartát-aminotranszferázhoz való immunglobulin-A-kötődés hozott létre. Orv. Hetil., 2014, 155(39), 1558–1562.
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