Glycosyltransferases

糖基转移酶
  • 文章类型: Journal Article
    胶原蛋白是细胞外基质的基本成分,是哺乳动物中最丰富的蛋白质。胶原蛋白属于纤维或纤维形成蛋白家族,其自组装成确定其机械性质和生物学功能的原纤维。到目前为止,胶原蛋白超家族的28个成员已被确认。胶原蛋白的生物合成发生在内质网,其中还进行特定的翻译后修饰-糖基化。胶原蛋白的糖基化非常特异,并通过β-O键将β-d-吡喃半乳糖和β-d-Glcp-(1→2)-d-Galp二糖添加到羟赖氨酸。几种糖基转移酶,即COLGALT1、COLGALT2、LH3和PGGHG葡萄糖苷酶,与胶原蛋白的糖基化有关,最近,解决了LH3的晶体结构。虽然没有完全理解,很明显,胶原蛋白的糖基化影响胶原蛋白的分泌和胶原纤维的排列。越来越多的证据也将胶原蛋白的糖基化与其功能和各种人类疾病联系起来。在理解胶原蛋白糖基化方面的最新进展允许其治疗潜力的开发和新试剂的发现。本文将讨论对理解胶原蛋白糖基化的相关贡献。然后,参与胶原蛋白糖基化的糖基转移酶,他们的结构,和催化机理将被调查。此外,将讨论糖基化在胶原蛋白功能和胶原蛋白糖基化相关疾病中的参与。
    Collagens are fundamental constituents of the extracellular matrix and are the most abundant proteins in mammals. Collagens belong to the family of fibrous or fiber-forming proteins that self-assemble into fibrils that define their mechanical properties and biological functions. Up to now, 28 members of the collagen superfamily have been recognized. Collagen biosynthesis occurs in the endoplasmic reticulum, where specific post-translational modification-glycosylation-is also carried out. The glycosylation of collagens is very specific and adds β-d-galactopyranose and β-d-Glcp-(1→2)-d-Galp disaccharide through β-O-linkage to hydroxylysine. Several glycosyltransferases, namely COLGALT1, COLGALT2, LH3, and PGGHG glucosidase, were associated the with glycosylation of collagens, and recently, the crystal structure of LH3 has been solved. Although not fully understood, it is clear that the glycosylation of collagens influences collagen secretion and the alignment of collagen fibrils. A growing body of evidence also associates the glycosylation of collagen with its functions and various human diseases. Recent progress in understanding collagen glycosylation allows for the exploitation of its therapeutic potential and the discovery of new agents. This review will discuss the relevant contributions to understanding the glycosylation of collagens. Then, glycosyltransferases involved in collagen glycosylation, their structure, and catalytic mechanism will be surveyed. Furthermore, the involvement of glycosylation in collagen functions and collagen glycosylation-related diseases will be discussed.
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  • 文章类型: Journal Article
    糖基转移酶(GTs)催化活性单糖供体向碳水化合物的转移以产生宽范围的寡糖结构。GTs在产生糖苷键方面表现出强的区域选择性和立体选择性,使它们在寡糖的体外合成中极具价值。用GTs合成低聚糖往往能得到高产率;然而,酶活性可能经历产物抑制。此外,核苷酸糖的较高成本限制了GT用于寡糖合成。在这次审查中,基于近期文献和CAZY网站数据,全面探讨了GTs的结构和机制。为GTs的功能研究提供创新思路,我们总结了GTs的几个显著特点,包括折叠,底物特异性,区域选择性,供体糖核苷酸,催化可逆性,以及GT和GHs之间的差异。特别是,我们强调了多酶级联反应和GTs共固定的最新进展,专注于克服产品抑制和成本问题。最后,我们介绍了已成功用于寡糖合成的各种类型的GT。我们得出的结论是,仍有机会改善酶促产生的寡糖产量,未来的研究应集中在提高产量和降低生产成本上。
    Glycosyltransferases (GTs) catalyze the transfer of active monosaccharide donors to carbohydrates to create a wide range of oligosaccharide structures. GTs display strong regioselectivity and stereoselectivity in producing glycosidic bonds, making them extremely valuable in the in vitro synthesis of oligosaccharides. The synthesis of oligosaccharides by GTs often gives high yields; however, the enzyme activity may experience product inhibition. Additionally, the higher cost of nucleotide sugars limits the usage of GTs for oligosaccharide synthesis. In this review, we comprehensively discussed the structure and mechanism of GTs based on recent literature and the CAZY website data. To provide innovative ideas for the functional studies of GTs, we summarized several remarkable characteristics of GTs, including folding, substrate specificity, regioselectivity, donor sugar nucleotides, catalytic reversibility, and differences between GTs and GHs. In particular, we highlighted the recent advancements in multi-enzyme cascade reactions and co-immobilization of GTs, focusing on overcoming problems with product inhibition and cost issues. Finally, we presented various types of GT that have been successfully used for oligosaccharide synthesis. We concluded that there is still an opportunity for improvement in enzymatically produced oligosaccharide yield, and future research should focus on improving the yield and reducing the production cost.
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  • 文章类型: Meta-Analysis
    背景:需要对龋齿进行简单的非侵入性循证干预,以克服修复范式中的局限性。自组装肽P11-4是非侵入性干预,可在初始龋齿病变中再生釉质。
    方法:作者对P11-4产品Curodont修复(Credentis;现在由vVARDIS制造)(CR)和Curodont修复氟化物(Credentis;现在由vVARDIS制造)对初始龋齿病变的有效性进行了系统评价和荟萃分析。主要结果是24个月后病变进展,龋齿逮捕,和空化。次要结果是合并的国际龋齿检测和评估系统评分类别的变化,定量光诱导荧光(QLF;Inspektor研究系统),美学外观,和病变大小。
    结果:6项临床试验符合纳入标准。本综述的结果代表2个主要结果和2个次要结果。与平行组相比,使用CR可能导致龋齿停滞大幅增加(相对风险[RR],1.82[95%CI,1.32至2.50];45%归因风险[95%CI,24%至60%];治疗所需数量[NNT],2.8),并且可能将病变大小平均(SD)减少32%(28%)。证据还表明,使用CR会导致空化大量减少(RR,0.32[95%CI,0.10至1.06];NNT,6.9),并且不确定降低合并的国际龋齿检测和评估系统评分(RR,3.68[95%CI,0.42至32.3];NNT,19).没有研究使用Curonot修复氟化物Plus。没有研究报告不良的美学变化。
    结论:CR可能对龋齿停止和病变大小减小具有临床重要影响。两项试验都有未蒙面的评估员,所有试验的偏倚风险均升高.作者建议进行更长的试验。CR是用于初始龋齿病变的有希望的治疗方法。本系统评价的方案在PROSPERO(304794)中事先注册。
    Simple noninvasive evidence-based interventions for caries are needed to overcome limitations in the restorative paradigm. The self-assembling peptide P11-4 is a noninvasive intervention that regenerates enamel in initial caries lesions.
    The authors conducted a systematic review and meta-analysis on the effectiveness of the P11-4 products Curodont Repair (Credentis; now manufactured by vVARDIS) (CR) and Curodont Repair Fluoride Plus (Credentis; now manufactured by vVARDIS) on initial caries lesions. Primary outcomes were lesion progression after 24 months, caries arrest, and cavitation. Secondary outcomes were changes in merged International Caries Detection and Assessment System score categories, quantitative light-induced fluorescence (QLF; Inspektor Research System), esthetic appearance, and lesion size.
    Six clinical trials met the inclusion criteria. Results of this review represent 2 primary and 2 secondary outcomes. When compared with parallel groups, use of CR likely results in a large increase in caries arrest (relative risk [RR], 1.82 [95% CI, 1.32 to 2.50]; 45% attributable risk [95% CI, 24% to 60%]; number needed to treat [NNT], 2.8) and likely decreases lesion size by a mean (SD) of 32% (28%). The evidence also suggests that use of CR results in a large reduction in cavitation (RR, 0.32 [95% CI, 0.10 to 1.06]; NNT, 6.9) and is uncertain about lowering merged International Caries Detection and Assessment System score (RR, 3.68 [95% CI, 0.42 to 32.3]; NNT, 19). No studies used Curodont Repair Fluoride Plus. No studies reported adverse esthetic changes.
    CR likely has clinically important effects on caries arrest and decreased lesion size. Two trials had nonmasked assessors, and all trials had elevated risks of bias. The authors recommend conducting longer trials. CR is a promising treatment for initial caries lesions. The protocol for this systematic review was registered a priori with PROSPERO (304794).
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  • 文章类型: English Abstract
    三萜皂苷在医学上有着广泛的应用,保健,化妆品,农业食品添加剂因其独特的化学性质和丰富的药理活性。UDP依赖性糖基转移酶(UGTs)是参与三萜皂苷生物合成的关键酶,并在三萜皂苷结构的多样性和药理活性中起重要作用。本文从UGTs的来源和受体类型等方面综述了UGTs参与植物三萜皂苷生物合成的研究进展。此外,还讨论了基于合成生物学的UGTs在三萜皂苷异源生物合成中的应用。
    Triterpenoid saponins are widely used in medicine, health cares, cosmetics, food additives and agriculture because of their unique chemical properties and rich pharmacological activities. UDP-dependent glycosyltransferases (UGTs) are the key enzymes involved in triterpenoid saponin biosynthesis, and play important roles in the diversity of triterpenoid saponin structures and pharmacological activities. This review summarized the UGTs involved in plant triterpenoid saponin biosynthesis based on the sources of UGTs and the types of receptors. Moreover, the application of UGTs in heterologous biosynthesis of triterpenoid saponins based on synthetic biology was also discussed.
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  • 文章类型: Journal Article
    UNASSIGNED: The present systematic review was conducted to investigate the effect of the self-assembling peptide (SAP) - P11-4 in the remineralization of enamel caries.
    UNASSIGNED: The systematic search for studies was conducted through CINAHL, EMBASE, MEDLINE, Scopus, PsychINFO, and various key journals. This review was conducted in adherence to PRISMA standards and was registered in PROSPERO with registration number CRD42019110156. The methodological quality of the studies was graded through Cochrane\'s tool of risk of bias in non-randomized studies - of interventions (ROBINS-I).
    UNASSIGNED: In total, 91 studies were identified for screening, and 12 studies were eligible. Ten studies showed effective enamel remineralization with P11-4 compared to controls. One study showed a combination of P11-4 with fluoride varnish or Casein Phosphopeptide-Amorphous Calcium Phosphate Fluoride (CPP-ACPF) leads to significantly higher remineralization compared to P11-4 alone. Quality assessment of study showed 6 (50%) studies as medium risk of bias and 6 (50%) studies as low risk of bias.
    UNASSIGNED: To conclude, the present study results showed SAP- P11-4 is effective in the remineralization of enamel caries.
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  • 文章类型: Journal Article
    Selectins belong to a group of adhesion molecules that fulfill an essential role in immune and inflammatory responses and tissue healing. Selectins are glycoproteins that decode the information carried by glycan structures, and non-covalent interactions of selectins with these glycan structures mediate biological processes. The sialylated and fucosylated tetrasaccharide sLex is an essential glycan recognized by selectins. Several glycosyltransferases are responsible for the biosynthesis of the sLex tetrasaccharide. Selectins are involved in a sequence of interactions of circulated leukocytes with endothelial cells in the blood called the adhesion cascade. Recently, it has become evident that cancer cells utilize a similar adhesion cascade to promote metastases. However, like Dr. Jekyll and Mr. Hyde\'s two faces, selectins also contribute to tissue destruction during some infections and inflammatory diseases. The most prominent function of selectins is associated with the initial stage of the leukocyte adhesion cascade, in which selectin binding enables tethering and rolling. The first adhesive event occurs through specific non-covalent interactions between selectins and their ligands, with glycans functioning as an interface between leukocytes or cancer cells and the endothelium. Targeting these interactions remains a principal strategy aimed at developing new therapies for the treatment of immune and inflammatory disorders and cancer. In this review, we will survey the significant contributions to and the current status of the understanding of the structure of selectins and the role of selectins in various biological processes. The potential of selectins and their ligands as therapeutic targets in chronic and acute inflammatory diseases and cancer will also be discussed. We will emphasize the structural characteristic of selectins and the catalytic mechanisms of glycosyltransferases involved in the biosynthesis of glycan recognition determinants. Furthermore, recent achievements in the synthesis of selectin inhibitors will be reviewed with a focus on the various strategies used for the development of glycosyltransferase inhibitors, including substrate analog inhibitors and transition state analog inhibitors, which are based on knowledge of the catalytic mechanism.
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  • 文章类型: Journal Article
    槲皮素及其衍生物是黄酮类化合物中黄酮醇类的重要代谢产物。槲皮素和一些缀合物已经被FDA批准用于人类使用。它们广泛分布在植物中,具有多种生物活性,比如抗癌,抗病毒,和抗氧化剂。因此,新型衍生物的生物合成是一个重要的研究领域。糖基化和甲基化是两种重要的修饰策略,长期以来一直在使用,并产生了许多在天然来源中不存在的新型代谢物。通过糖基化修饰大肠杆菌中的槲皮素的策略,例如,涉及在宿主中过表达相应的糖基转移酶(GT)和代谢工程以增加核苷二磷酸糖(NDP糖)。还有一些人使用了大肠杆菌以外的微生物,如链霉菌。,用于生物转化过程。对结构活性关系的总体研究表明,槲皮素中某些残基的修饰降低了一种活性,但增加了其他活性。这篇综述总结了上述所有信息。
    Quercetin and its derivatives are important metabolites that belong to the flavonol class of flavonoids. Quercetin and some of the conjugates have been approved by the FDA for human use. They are widely distributed among plants and have various biological activities, such as being anticancer, antiviral, and antioxidant. Hence, the biosynthesis of novel derivatives is an important field of research. Glycosylation and methylation are two important modification strategies that have long been used and have resulted in many novel metabolites that are not present in natural sources. A strategy for modifying quercetin in E. coli by means of glycosylation, for example, involves overexpressing respective glycosyltransferases (GTs) in the host and metabolic engineering for increasing nucleoside diphosphate sugar (NDP sugar). Still others have used microorganisms other than E. coli, such as Streptomyces sp., for the biotransformation process. The overall study of the structural activity relationship has revealed that modification of some residues in quercetin decreased one activity but increased others. This review summarizes all of the information mentioned above.
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  • 文章类型: Journal Article
    Progress in the functional biochemical analysis of plant glycosyltransferases (GTs) has been slow because plant GTs are generally membrane proteins, operate as part of larger, multimeric complexes, and utilize a vast complexity of substrate acceptors. Therefore, the field would benefit from development of adequate high throughput expression as well as product detection and characterization techniques. Here we review current approaches to tackle such obstacles and suggest a new path forward: nucleic acid programmable protein arrays (NAPPA) with liquid sample desorption ionization (LS-DESI-MS) mass spectrometry. NAPPA utilizes in vitro transcription and translation to produce epitope-tagged fusion proteins from cloned GT cDNAs. LS-DESI is a soft ionization technique that allows rapid and sensitive MS-based product characterization in situ. Coupling both approaches provides the opportunity to examine individual GT functions as well as protein-protein interactions. Furthermore, advances in automated oligosaccharide synthesis and lipid nanodisc technology should allow testing of plant GT activity in presence of numerous substrate acceptors and lipid environments in a high throughput fashion. Thus, NAPPA-DESI-MS has great potential to make headway in biochemical characterization of the large number of plant GTs.
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  • 文章类型: Journal Article
    细菌抗生素耐药性是当今世界上迅速扩大的问题。革兰氏阴性菌外膜的功能化提供了对细胞外抗微生物剂的保护,并作为一种先天的抵抗机制。脂多糖(LPS)是革兰氏阴性细菌的主要细胞表面成分,有助于保护细菌免受细胞外威胁。通过由许多糖基转移酶(GT)顺序添加糖部分来生物合成LPS。七糖基转移酶催化添加多种庚糖以形成LPS的核心区域;在所有革兰氏阴性细菌中发现至多四种七糖基转移酶。其中研究最多的是HepI。缺乏HepI的细胞在其细胞表面显示截短的LPS,使它们对疏水性抗生素更敏感。HepI-IV都是GT-B结构家族的结构相似成员,一类被发现具有高度动态性的酶。了解七糖基转移酶的构象变化对有效抑制七糖基转移酶具有重要意义。也有助于理解所有的GT-B酶。寻找新的更聪明的方法来抑制细菌生长至关重要,和七糖基转移酶可能为如何抑制许多GT-B酶提供了重要的模型。
    Bacterial antibiotic resistance is a rapidly expanding problem in the world today. Functionalization of the outer membrane of Gram-negative bacteria provides protection from extracellular antimicrobials, and serves as an innate resistance mechanism. Lipopolysaccharides (LPS) are a major cell-surface component of Gram-negative bacteria that contribute to protecting the bacterium from extracellular threats. LPS is biosynthesized by the sequential addition of sugar moieties by a number of glycosyltransferases (GTs). Heptosyltransferases catalyze the addition of multiple heptose sugars to form the core region of LPS; there are at most four heptosyltransferases found in all Gram-negative bacteria. The most studied of the four is HepI. Cells deficient in HepI display a truncated LPS on their cell surface, causing them to be more susceptible to hydrophobic antibiotics. HepI-IV are all structurally similar members of the GT-B structural family, a class of enzymes that have been found to be highly dynamic. Understanding conformational changes of heptosyltransferases are important to efficiently inhibiting them, but also contributing to the understanding of all GT-B enzymes. Finding new and smarter methods to inhibit bacterial growth is crucial, and the Heptosyltransferases may provide an important model for how to inhibit many GT-B enzymes.
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  • 文章类型: Journal Article
    α-Dystroglycanopathy, an autosomal recessive disease, is associated with the development of a variety of diseases, including muscular dystrophy. In humans, α-dystroglycanopathy includes various types of congenital muscular dystrophy such as Fukuyama type congenital muscular dystrophy (FCMD), muscle eye brain disease (MEB), and the Walker Warburg syndrome (WWS), and types of limb girdle muscular dystrophy 2I (LGMD2I). α-Dystroglycanopathy share a common etiology, since it is invariably caused by gene mutations that are associated with the O-mannose glycosylation pathway of α-dystroglycan (α-DG). α-DG is a central member of the dystrophin glycoprotein complex (DGC) family in peripheral membranes, and the proper glycosylation of α-DG is essential for it to bind to extracellular matrix proteins, such as laminin, to cell components. The disruption of this ligand-binding is thought to result in damage to cell membrane integration, leading to the development of muscular dystrophy. Clinical manifestations of α-dystroglycanopathy frequently include mild to severe alterations in the central nervous system and optical manifestations in addition to muscular dystrophy. Eighteen causative genes for α-dystroglycanopathy have been identified to date, and it is likely that more will be reported in the near future. These findings have stimulated extensive and energetic investigations in this research field, and novel glycosylation pathways have been implicated in the process. At the same time, the use of gene therapy, antisense therapy, and enzymatic supplementation have been evaluated as therapeutic possibilities for some types of α-dystroglycanopathy. Here we review the molecular and clinical findings associated with α-dystroglycanopathy and the development of therapeutic approaches, by comparing the approaches with the development of Duchenne muscular dystrophy.
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