Glycomics

糖组学
  • 文章类型: Journal Article
    糖组学实验所需的最低信息(MIRAGE)是一项标准化糖分析方法报告并评估其可重复性的举措。迄今为止,MIRAGE委员会发布了一些报告指南,描述了样品制备方法应提供的信息,质谱方法,液相色谱分析,外切糖苷酶消化,聚糖微阵列方法,和核磁共振方法。这里,我们提供了第一版的毛细管电泳(CE)分析糖蛋白(proteo)mics报告指南,用于科学文献中实验条件的标准化和高质量报告。该指南涵盖了glyco(proteo)micsCE实验的所有方面,包括样品制备,CE操作模式(CZE,CGE,CEC,MEKC,首席执行官,cITP),仪器配置,毛细管分离条件,检测,数据分析,和实验描述符。这些指南与其他MIRAGE指南链接,可通过项目网站https://www免费获得。贝尔斯坦-研究所。de/en/projects/mirage/guidelines/#ce_analysis(doi:10.3762/mirage.7)。
    The Minimum Information Required for a Glycomics Experiment (MIRAGE) is an initiative to standardize the reporting of glycoanalytical methods and to assess their reproducibility. To date, the MIRAGE Commission has published several reporting guidelines that describe what information should be provided for sample preparation methods, mass spectrometry methods, liquid chromatography analysis, exoglycosidase digestions, glycan microarray methods, and nuclear magnetic resonance methods. Here, we present the first version of reporting guidelines for glyco(proteo)mics analysis by capillary electrophoresis (CE) for standardized and high-quality reporting of experimental conditions in the scientific literature. The guidelines cover all aspects of a glyco(proteo)mics CE experiment including sample preparation, CE operation mode (CZE, CGE, CEC, MEKC, cIEF, cITP), instrument configuration, capillary separation conditions, detection, data analysis, and experimental descriptors. These guidelines are linked to other MIRAGE guidelines and are freely available through the project website https://www.beilstein-institut.de/en/projects/mirage/guidelines/#ce_analysis (doi:10.3762/mirage.7).
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  • 文章类型: Journal Article
    The Minimum Information Required for a Glycomics Experiment (MIRAGE) is an initiative created by experts in the fields of glycobiology, glycoanalytics and glycoinformatics to design guidelines that improve the reporting and reproducibility of glycoanalytical methods. Previously, the MIRAGE Commission has published guidelines for describing sample preparation methods and the reporting of glycan array and mass spectrometry techniques and data collections. Here, we present the first version of guidelines that aim to improve the quality of the reporting of liquid chromatography (LC) glycan data in the scientific literature. These guidelines cover all aspects of instrument setup and modality of data handling and manipulation and is cross-linked with other MIRAGE recommendations. The most recent version of the MIRAGE-LC guidelines is freely available at the MIRAGE project website doi:10.3762/mirage.4.
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  • 文章类型: Journal Article
    The minimum information required for a glycomics experiment (MIRAGE) project was established in 2011 to provide guidelines to aid in data reporting from all types of experiments in glycomics research including mass spectrometry (MS), liquid chromatography, glycan arrays, data handling and sample preparation. MIRAGE is a concerted effort of the wider glycomics community that considers the adaptation of reporting guidelines as an important step towards critical evaluation and dissemination of datasets as well as broadening of experimental techniques worldwide. The MIRAGE Commission published reporting guidelines for MS data and here we outline guidelines for sample preparation. The sample preparation guidelines include all aspects of sample generation, purification and modification from biological and/or synthetic carbohydrate material. The application of MIRAGE sample preparation guidelines will lead to improved recording of experimental protocols and reporting of understandable and reproducible glycomics datasets.
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