Drug resistance mechanisms

耐药机制
  • 文章类型: Journal Article
    耐碳青霉烯类肺炎克雷伯菌(CRKP)的出现因其显著的抗生素耐药性而引起国际关注。值得注意的是,与成人相比,儿童表现出不同的抗性机制,需要一种不同的抗生素选择方法。对CRKP的流行病学和耐药机制进行全面的分析对于建立临床抗感染策略和精确预防控制措施的坚实基础至关重要。
    这项研究涉及在中国一家三甲医院收集31个来自儿科和成人患者的非重复菌株,从2016年7月到2022年7月,测试抗性基因,抗菌敏感性,和同源性分析。
    婴儿(0-1岁)是最大的小儿CRKP组,61.3%的病例。新生儿重症监护病房(NICU)和儿科是受影响的主要科室。患有CRKP的成年人平均年龄为67岁,神经内科和急诊ICU患病率最高。药敏试验显示成人CRKP菌株对阿米卡星具有较高的耐药性,环丙沙星,复方新诺明,和氨曲南与儿科菌株相比。相反,儿科菌株对头孢他啶/阿维巴坦的耐药率较高。确定的主要抗性基因是儿童的blaNDM-5(58.1%)和成人的blaKPC-2(87.1%),两组中超过93%的超广谱β-内酰胺酶(ESBL)基因检测呈阳性。多位点序列分型(MLST)表明ST2735和ST11是儿童和成人的主要类型,分别。脉冲场凝胶电泳(PFGE)鉴定了两个年龄组的ST11blaKPC-2和ST15blaOXA-232的克隆传播模式。值得注意的是,这项研究报告了NICU中ST1114型CRKP共同产生blaNDM-5和blaOXA-181的首例。
    这项研究揭示了儿童和成人CRKP中不同的耐药机制和流行病学。确定的克隆传播模式强调需要改善感染控制以防止抗性菌株的传播。
    UNASSIGNED: The emergence of carbapenem-resistant Klebsiella pneumoniae (CRKP) has garnered international concern due to its significant antibiotic resistance. Notably, children exhibit distinct resistance mechanisms compared to adults, necessitating a differential approach to antibiotic selection. A thorough analysis of CRKP\'s epidemiology and drug resistance mechanisms is essential for establishing a robust foundation for clinical anti-infection strategies and precise prevention and control measures.
    UNASSIGNED: This study involved the collection of 31 non-repetitive strains from pediatric and adult patients at a tertiary hospital in China, spanning from July 2016 to July 2022, testing for resistance genes, antimicrobial susceptibility, and homology analysis.
    UNASSIGNED: Infants (0-1 year) were the largest pediatric CRKP group, with 61.3% of cases. The neonatal intensive care unit (NICU) and pediatrics were the main departments affected. Adults with CRKP had a mean age of 67 years, with the highest prevalence in neurology and emergency ICU. Antimicrobial susceptibility testing revealed that adult CRKP strains exhibited higher resistance to amikacin, ciprofloxacin, cotrimoxazole, and aztreonam compared to pediatric strains. Conversely, pediatric strains showed a higher rate of resistance to ceftazidime/avibactam. The predominant resistance genes identified were bla NDM-5 in children (58.1%) and bla KPC-2 in adults (87.1%), with over 93% of both groups testing positive for extended-spectrum beta-lactamase (ESBL) genes. Multilocus Sequence Typing (MLST) indicated ST2735 and ST11 as the predominant types in children and adults, respectively. Pulsed-field gel electrophoresis (PFGE) identified clonal transmission patterns of ST11 bla KPC-2 and ST15 bla OXA-232 across both age groups. Notably, this study reports the first instance of ST1114-type CRKP co-producing bla NDM-5 and bla OXA-181 in the NICU.
    UNASSIGNED: This study reveals distinct resistance mechanisms and epidemiology in CRKP from children and adults. The identified clonal transmission patterns emphasize the need for improved infection control to prevent the spread of resistant strains.
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  • 文章类型: Journal Article
    Resistance mechanisms of Pseudomonas aeruginosa to ceftolozane/tazobactam (C/T) were assessed on a collection of 420 nonredundant strains nonsusceptible to ceftazidime (MIC > 8 μg/ml) and/or imipenem (>4 μg/ml), collected by 36 French hospital laboratories over a one-month period (the GERPA study). Rates of C/T resistance (MIC > 4/4 μg/ml) were equal to 10% in this population (42/420 strains), and 23.2% (26/112) among the isolates resistant to both ceftazidime and imipenem. A first group of 21 strains (50%) was found to harbor various extended-spectrum β-lactamases (1 OXA-14; 2 OXA-19; 1 OXA-35; 1 GES-9; and 3 PER-1), carbapenemases (2 GES-5; 1 IMP-8; and 8 VIM-2), or both (1 VIM-2/OXA-35 and 1 VIM-4/SHV-2a). All the strains of this group belonged to widely distributed epidemic clones (ST111, ST175, CC235, ST244, ST348, and ST654), and were highly resistant to almost all the antibiotics tested except colistin. A second group was composed of 16 (38%) isolates moderately resistant to C/T (MICs from 8/4 to 16/4 μg/ml), of which 7 were related to international clones (ST111, ST253, CC274, ST352, and ST386). As demonstrated by targeted mass spectrometry, cloxacillin-based inhibition tests, and gene bla PDC deletion experiments, this resistance phenotype was correlated with an extremely high production of cephalosporinase PDC. In part accounting for this strong PDC upregulation, genomic analyses revealed the presence of mutations in the regulator AmpR (D135N/G in 6 strains) and enzymes of the peptidoglycan recycling pathway, such as AmpD, PBP4, and Mpl (9 strains). Finally, all of the 5 (12%) remaining C/T-resistant strains (group 3) appeared to encode PDC variants with mutations known to improve the hydrolytic activity of the β-lactamase toward ceftazidime and C/T (F147L, ΔL223-Y226, E247K, and N373I). Collectively, our results highlight the importance of both intrinsic and transferable mechanisms in C/T-resistant P. aeruginosa Which mutational events lead some clinical strains to massively produce the natural cephalosporinase PDC remains incompletely understood.
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  • 文章类型: Journal Article
    在美国,社区获得性多药耐药肠杆菌科(MDR-Ent)感染继续增加。在先前的研究中,我们确定了芝加哥的邻近地区,伊利诺伊州,其中儿童MDR-Ent感染的几率高5至6倍。为了防止MDR-Ent的社区传播,我们需要确定MDR-Ent水库.对4个芝加哥水道进行了MDR-Ent和相关抗生素抗性基因(ARGs)的初步研究。三条水道(A1至A3)被标记为“偶然接触娱乐”的安全(例如,皮划艇),A4是一条非娱乐性水道,输送非消毒水。收集和处理地表水样品用于标准细菌培养和鸟枪宏基因组测序。一般来说,A3和A4(没有水力连接的相邻水道)在细菌类群中非常相似,ARG配置文件,以及肠杆菌科内相应进化枝和属的丰度,从全部微生物群落中回收的总ARG丰度在A3和A4之间密切相关(R2=0.97)。相对于A2(84MPN)和A1(32MPN),A4(783最可能的数量[MPN])和A3(200MPN)中的大肠杆菌数量(每100ml水)最高。我们在肠杆菌科中发现了ARGs,如MCR-1(粘菌素),Qnr和OqxA/B(喹诺酮类药物),CTX-M,OXA和ACT/MIR(β-内酰胺),和AAC(氨基糖苷)。我们发现附近没有水力连接的水道之间的微生物群落组成存在显着相关性,表明交叉播种和ARGs流动性的潜力。肠杆菌科和ARG谱支持假设的担忧,即休闲水道是社区获得性MDR-Ent的潜在来源。
    Community-acquired multidrug resistant Enterobacteriaceae (MDR-Ent) infections continue to increase in the United States. In prior studies, we identified neighboring regions in Chicago, Illinois, where children have 5 to 6 times greater odds of MDR-Ent infections. To prevent community spread of MDR-Ent, we need to identify the MDR-Ent reservoirs. A pilot study of 4 Chicago waterways for MDR-Ent and associated antibiotic resistance genes (ARGs) was conducted. Three waterways (A1 to A3) are labeled safe for \"incidental contact recreation\" (e.g., kayaking), and A4 is a nonrecreational waterway that carries nondisinfected water. Surface water samples were collected and processed for standard bacterial culture and shotgun metagenomic sequencing. Generally, A3 and A4 (neighboring waterways which are not hydraulically connected) were strikingly similar in bacterial taxa, ARG profiles, and abundances of corresponding clades and genera within the Enterobacteriaceae Additionally, total ARG abundances recovered from the full microbial community were strongly correlated between A3 and A4 (R 2 = 0.97). Escherichia coli numbers (per 100 ml water) were highest in A4 (783 most probable number [MPN]) and A3 (200 MPN) relative to A2 (84 MPN) and A1 (32 MPN). We found concerning ARGs in Enterobacteriaceae such as MCR-1 (colistin), Qnr and OqxA/B (quinolones), CTX-M, OXA and ACT/MIR (beta-lactams), and AAC (aminoglycosides). We found significant correlations in microbial community composition between nearby waterways that are not hydraulically connected, suggesting cross-seeding and the potential for mobility of ARGs. Enterobacteriaceae and ARG profiles support the hypothesized concerns that recreational waterways are a potential source of community-acquired MDR-Ent.
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