Chlorophyll content and fluorescence parameters are crucial indicators to evaluate the light use efficiency in rice; however, the correlations among these parameters and the underlying genetic mechanisms remain poorly understood. Here, to clarify these issues, we conducted a genome-wide association study (GWAS) on 225 rice accessions. In the phenotypic and Mendelian randomization (MR) analysis, a weak negative correlation was observed between the chlorophyll content and actual quantum yield of photosystem II (ΦII). The phenotypic diversity observed in SPAD, NPQt, ΦNPQ, and Fv/Fm among accessions was affected by genetic background. Furthermore, the GWAS identified 78 SNPs and 17 candidate genes significantly associated with SPAD, NPQt, ΦII, ΦNPQ, qL and qP. Combining GWAS on 225 rice accessions with transcriptome analysis of two varieties exhibiting distinct fluorescence characteristics revealed two potential candidate genes (Os03g0583000 from ΦII & qP traits and Os06g0587200 from NPQt trait), which are respectively associated with peroxisomes, and protein kinase catalytic domains might involve in regulating the chlorophyll content and chlorophyll fluorescence. This study provides novel insights into the correlation among chlorophyll content and fluorescence parameters and the genetic mechanisms in rice, and offers valuable information for the breeding of rice with enhanced photosynthetic efficiency.

Chlorophyll is an essential component that captures light energy to drive photosynthesis. Chlorophyll content can affect photosynthetic activity and thus yield. Therefore, mining candidate genes of chlorophyll content will help increase maize production. Here, we performed a genome-wide association study (GWAS) on chlorophyll content and its dynamic changes in 378 maize inbred lines with extensive natural variation. Our phenotypic assessment showed that chlorophyll content and its dynamic changes were natural variations with a moderate genetic level of 0.66/0.67. A total of 19 single-nucleotide polymorphisms (SNPs) were found associated with 76 candidate genes, of which one SNP, 2376873-7-G, co-localized in chlorophyll content and area under the chlorophyll content curve (AUCCC). Zm00001d026568 and Zm00001d026569 were highly associated with SNP 2376873-7-G and encoded pentatricopeptide repeat-containing protein and chloroplastic palmitoyl-acyl carrier protein thioesterase, respectively. As expected, higher expression levels of these two genes are associated with higher chlorophyll contents. These results provide a certain experimental basis for discovering the candidate genes of chlorophyll content and finally provide new insights for cultivating high-yield and excellent maize suitable for planting environment.

Bitter gourd (Momordica charantia L.) is a member of Cucurbitaceae family and has long been used as a source of food and medicine for its rich bioactive components or secondary metabolites. However, there are relatively few large-scale detection, identification, and quantitative studies on flavonoids in the pericarp of bitter gourds of different colours. To determine the differences in the diversity and specificity of flavonoids in the pericarp of bitter gourd of different colours, the metabolic profiles in the pericarp of three coloured bitter gourd accessions, dark green (mo), pale green (lv), and white (bai), were analysed by ultra-performance liquid chromatography-tandem mass spectrometry. Priorly, it was confirmed that the different shades of green were caused by the content of chlorophyll. A total of 93 metabolites, including 90 flavonoids and three tannins, were detected in the current study. These 90 flavonoids included three isoflavones, nine dihydroflavones, seven flavanols, 34 flavonols, 26 flavonoids, four chalcones, five flavonoid carbonosides, and two dihydroflavonols. Compared to mo, both lv and bai had 21 and 25 different metabolites, respectively, while there were only nine different metabolites between lv and bai. The relative contents of vitexin and isovitexin increased with the deeper colour of the bitter gourd. Thus, the different metabolites in coloured bitter gourds are mainly involved in the biosynthesis of flavonols, flavonoid carbonosides, and flavonoids. This study enables identification of metabolic differences in the pericarp of bitter gourds of different colours. The results will be helpful for quality breeding of new bitter gourd varieties and shall provide a reference for their medical application.
UNASSIGNED: The online version contains supplementary material available at 10.1007/s12298-022-01210-7.

To identify the key indicators for salt tolerance evaluation of Salix matsudana Koidz, we explored the relationship of ion absorption and distribution with chlorophyll, fluorescence parameters (leaf performance index, maximum photochemical efficiency), and photosynthetic gas parameters (net photosynthetic rate, transpiration, stomatal conductance, intercellular carbon dioxide concentration) under salt stress. We established 4 treatment groups and one control group based on salinity levels of NaCl hydroponic solutions (171, 342, 513, and 684 mm). The Na+/K+, Na+/Ca2+, chlorophyll fluorescence, and photosynthetic parameters of leaves were measured on the 1st, 3rd, 5th, 8th, 11th, and 15th days to analyze the correlations of chlorophyll, chlorophyll fluorescence and photosynthetic parameters to the ion distribution ratio. The results showed that (1) The ratio of the dry weight of roots to leaves gradually increased with increasing salt concentration, whereas the water content of leaves and roots first increased and then decreased with increasing time. (2) The content of Na+, Na+/K+, and Na+/Ca2+ in roots and leaves increased with increasing salt stress concentration and treatment time, and the difference gradually narrowed. (3) Ca2+ was lost more than K+ under salt stress, and Na+/Ca2+ was more sensitive to the salt stress environment than Na+/K+. (4) Because the root system had a retention effect, both Na+/K+ and Na+/Ca2+ in roots under different NaCl concentrations and different treatment times were higher than those in leaves, and Na+/Ca2+ was much higher than Na+/K+ in roots. (5) Na+/K+ had a higher correlation with fluorescence parameters than Na+/Ca2+. Among them, Na+/K+ had a significantly negative correlation with the maximum photochemical efficiency, and the correlation coefficient R 2 was 0.8576. (6) Photosynthetic gas parameters had a higher correlation with Na+/Ca2+ than with Na+/K+. Among them, significantly negative correlations were noted between Na+/Ca2+ and Gs as well as between Na+/Ca2+ and E under salt stress. The correlation between Na+/Ca2+ and Gs was the highest with a correlation coefficient of 0.9368. (7) Na+/K+ and Na+/Ca2+ had no significant correlation with chlorophylls. Na+/Ca2+ was selected as a key index to evaluate the salt tolerance of S. matsudana Koidz, and the results provided a reference for analyzing the relationship between ion transport and distribution for photosynthesis.

Biomonitoring was proposed to assess the condition of living organisms or entire ecosystems with the use of bioindicators-species sensitive to specific pollutants. It is important that the bioindicator species remains alive for as long as possible while retaining the ability to react to the negative effects of pollution (elimination/neutralization of hazardous contaminants). The purpose of the study was to assess the survival of Pleurozium schreberi moss during exposure (moss-bag technique) based on the measurement of the concentration of elements (Ni, Cu, Zn, Cd, and Pb), chlorophyll content, and its fluorescence. The study was carried out using a CCM-300 portable chlorophyll content meter, portable fluorometer, UV-Vis spectrophotometer, and a flame atomic absorption spectrometer. As a result of the laboratory tests, no significant differences were found in the chlorophyll content in the gametophytes of mosses tested immediately after collection from the forest, compared to those drying at room temperature in the laboratory (p = 0.175 for Student\'s t-test results). Mosses exposed using the moss-bag technique of active biomonitoring were characterized by a drop in the chlorophyll content over 12 weeks (more than 50% and 60% for chlorophyll-a and chlorophyll-b, respectively). Chlorophyll content in mosses during exposure was correlated with actual photochemical efficiency (yield) of photosystem II (calculated value of Pearson\'s linear correlation coefficient was 0.94-there was a significant correlation between chlorophyll a and yield p = 0.02). The highest metal increases in mosses (RAF values) were observed for zinc, lead, and copper after the second and third month of exposure. The article demonstrates that the moss exposed in an urbanized area for a period of three months maintains the properties of good bioindicator of environmental quality.

This work aimed to develop a reliable and fast approach to estimate the plant tolerance degree to heavy metal (HM) phytotoxicity. Two independent experiments were carried out using tomato accessions, with contrasting morphological features, that were grown in a hydroponic solution containing different CdCl2 concentrations for 7 days. Plant dry weight and chlorophyll content (SPAD units) were evaluated, and tolerance degree to Cd toxicity was estimated according to the tolerance index (TI), which is a new mathematical formula based on plant biomass proposed in this study. Although with different magnitudes, tomato exhibited reductions in their dry weight concurrently with the increasing CdCl2 concentration. By contrast, chlorophyll content presented no standard response, decreasing and even increasing according to CdCl2 concentrations, indicating that only under certain conditions (particularly, at CdCl2 50 μM), this parameter can be used to estimate plant tolerance to Cd toxicity. TI was efficiently able to segregate tomato cultivars with similar performance (based on the total dry weight of plants), and such segregation was optimized when the hydroponic solution contained from 25 to 50 μM CdCl2. Within this range, data pointed at 35 μM CdCl2 as the best concentration to be employed in studies related to the tomato tolerance/sensitivity to Cd toxicity. In conclusion, TI proved to be a reliable estimator of tolerance degree to Cd exposure in genetically distinct tomato accessions. Moreover, TI can be used for this same purpose in plants under other HM-induced stresses.