Biological Variation, Population

生物变异,人口
  • 文章类型: Journal Article
    目的:蛋白激酶Cδ(PKCδ)缺乏症是一种罕见的遗传性疾病,在2013年被确定为系统性红斑狼疮的单基因病因。自从第一批病例被描述以来,表型已扩展到包括患有自身免疫性淋巴组织增生综合征相关综合征和感染易感性类似于慢性肉芽肿病或联合免疫缺陷的儿童.我们回顾了目前发表的关于病理生理学的数据,临床表现,PKCδ缺乏症的调查与管理。
    方法:使用MEDLINE进行文献综述。
    结果:文献中描述了20例具有显著异质性的病例。
    结论:临床表现的变化描述了PKCδ在针对病原体的免疫耐受和效应功能中的广泛和关键的作用。
    Protein kinase C δ (PKCδ) deficiency is a rare genetic disorder identified as a monogenic cause of systemic lupus erythematosus in 2013. Since the first cases were described, the phenotype has expanded to include children presenting with autoimmune lymphoproliferative syndrome-related syndromes and infection susceptibility similar to chronic granulomatous disease or combined immunodeficiency. We review the current published data regarding the pathophysiology, clinical presentation, investigation and management of PKCδ deficiency.
    Literature review was performed using MEDLINE.
    Twenty cases have been described in the literature with significant heterogeneity.
    The variation in clinical presentation delineates the broad and critical role of PKCδ in immune tolerance and effector functions against pathogens.
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  • 文章类型: Meta-Analysis
    目的:出血和血栓性疾病的诊断和监测取决于正确的止血测量。在这种情况下,高质量生物变异(BV)数据的可用性很重要。许多研究报告了这些被测量的BV数据,但是结果是多种多样的。本研究旨在通过对符合条件的研究进行荟萃分析,为止血测量提供全球受试者内(CVI)和受试者间(CVG)BV估计,通过使用生物变异数据关键评估清单(BIVAC)进行评估。
    方法:相关BV研究由BIVAC分级。CVI和CVG的加权估计值是通过对健康成年人进行的BIVAC依从性研究(A-C级;A代表最佳研究设计)得出的BV数据进行荟萃分析获得的。
    结果:在26项研究中,报告了35个止血测量对象的BV数据。对于9个测量,仅鉴定出一份合格的出版物,无法进行荟萃分析.74%的出版物被评为BIVACC。CVI和CVG在止血测量对象之间差异很大。PAI-1抗原(CVI48.6%;CVG59.8%)和活性(CVI34.9%;CVG90.2%)的估计最高,而活化蛋白C耐药率最低(CVI1.5%;CVG4.5%)。
    结论:本研究提供了CVI和CVG的最新BV估计值,其置信区间为95%,适用于各种止血测量。这些估计可用于形成止血测试的分析性能规范的基础,用于出血和血栓形成事件所需的诊断检查以及风险评估。
    The diagnosis and monitoring of bleeding and thrombotic disorders depend on correct haemostatic measurements. The availability of high-quality biological variation (BV) data is important in this context. Many studies have reported BV data for these measurands, but results are varied. The present study aims to deliver global within-subject (CVI) and between-subject (CVG) BV estimates for haemostasis measurands by meta-analyses of eligible studies, by assessment with the Biological Variation Data Critical Appraisal Checklist (BIVAC).
    Relevant BV studies were graded by the BIVAC. Weighted estimates for CVI and CVG were obtained via meta-analysis of the BV data derived from BIVAC-compliant studies (graded A-C; whereby A represents optimal study design) performed in healthy adults.
    In 26 studies BV data were reported for 35 haemostasis measurands. For 9 measurands, only one eligible publication was identified and meta-analysis could not be performed. 74% of the publications were graded as BIVAC C. The CVI and CVG varied extensively between the haemostasis measurands. The highest estimates were observed for PAI-1 antigen (CVI 48.6%; CVG 59.8%) and activity (CVI 34.9%; CVG 90.2%), while the lowest were observed for activated protein C resistance ratio (CVI 1.5%; CVG 4.5%).
    This study provides updated BV estimates of CVI and CVG with 95% confidence intervals for a wide range of haemostasis measurands. These estimates can be used to form the basis for analytical performance specifications for haemostasis tests used in the diagnostic work-up required in bleeding- and thrombosis events and for risk assessment.
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  • 文章类型: Case Reports
    背景:威尔逊氏病(WD)是由铜转运ATP7B基因的致病性变异引起的铜沉积的常染色体隐性遗传疾病。关于症状表现,WD的基因型和表型之间没有明显的相关性。这得到了遗传相同的WD双胞胎的支持,这些双胞胎具有表型不一致和对WD特异性疗法的不同反应行为。案例介绍:女性纯合双胞胎之一(年龄:26岁)发展写作,说话,吞咽和行走缺陷导致住院检查没有结论性结果,但建议进行基因检测。两个姐妹都进行了测试,并且对于C.2304dupC;p(Met769Hisf*26)和C.3207C>A;p(His1069Gln)突变是杂合的。受影响的兄弟姐妹使用450mgD-青霉胺(DPA)进行自我药物治疗并不能防止进一步恶化。她患上了青少年帕金森氏综合症,并成为轮椅和无房者。应用了经皮内镜胃造瘘术。她无症状的妹妹帮助她日常生活。尽管在严重受影响的患者中DPA剂量立即增加(3周内高达1800mg),并且在我们机构首次就诊后无症状患者中开始DPA治疗(2周内高达600mg),两名患者的肝功能检查进一步恶化。两个月后,帕金森病患者开始好转并再次行走,但是经历了几次跌倒,摔断了她的右肩,接受了两次必要的手术。随着进一步的铜消除疗法,肝功能障碍改善了两个患者,在受影响严重的患者中,无需进行原位肝移植(LTX)。她的肝脏和大脑功能障碍的出色恢复仅因肾病综合征的发展而暂时中断,肾病综合征在改用Cuprior®后消失。不幸的是,她死于暴发性肺炎。结论:尽管相同的遗传倾向,单卵双胞胎的WD症状表现可能有所不同,他们可能需要被放置在一个非常不同的治疗方案。到目前为止,潜在的基因-环境相互作用尚不清楚。
    Background: Wilson’s disease (WD) is an autosomal-recessive disorder of copper deposition caused by pathogenic variants in the copper-transporting ATP7B gene. There is not a clear correlation between genotype and phenotype in WD regarding symptom manifestations. This is supported by the presentation of genetically identical WD twins with phenotypic discordance and different response behavior to WD-specific therapy. Case Presentation: One of the female homozygous twins (age: 26 yrs) developed writing, speaking, swallowing and walking deficits which led to in-patient examination without conclusive results but recommended genetic testing. Both sisters were tested and were heterozygous for the C.2304dupC;p(Met769Hisf*26) and the C.3207C>A;p(His1069Gln) mutation. Self-medication of the affected sibling with 450 mg D-penicillamine (DPA) did not prevent further deterioration. She developed a juvenile parkinsonian syndrome and became wheelchair-bound and anarthric. A percutaneous endoscopic gastrostomy was applied. Her asymptomatic sister helped her with her daily life. Despite the immediate increase of the DPA dose (up to 1800 mg within 3 weeks) in the severely affected patient and the initiation of DPA therapy (up to 600 mg within 2 weeks) in the asymptomatic patient after the first visit in our institution, liver function tests further deteriorated in both patients. After 2 months, the parkinsonian patient started to improve and walk again, but experienced several falls, broke her right shoulder and underwent two necessary surgical interventions. With further consequent copper elimination therapy, liver dysfunction improved in both patients, without need for orthotopic liver transplantation (LTX) in the severely affected patient. Her excellent recovery of liver and brain dysfunction was only transiently interrupted by the development of a nephrotic syndrome which disappeared after switching to Cuprior®. Unfortunately, she died from fulminant pneumonia. Conclusion: Despite identical genetic disposition, WD symptom presentations may develop differently in monozygotic twins, and they may need to be placed on a very different therapeutical regimen. The underlying gene-environment interaction is unclear so far.
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  • 文章类型: Journal Article
    由于CLCN5和OCRL(DD2)突变,Dent病是一种罕见的X连锁肾小管病。OCRL突变也会导致Lowe综合征(LS)累及眼睛,大脑和肾脏.DD2通常被描述为轻度形式的LS,因为一些患者可能存在肾外症状(ESs)。由于DD2是一种罕见疾病,报告病例数较少,目前尚不清楚它是否具有与LS不同的临床表现.我们回顾性分析了35名DD2男性的表型和基因型,并回顾了所有已发表的DD2病例。我们分析了OCRL基因突变的分布,并根据OCRL蛋白结构域中的突变类型和定位评估了ES的类型和频率。患有至少一种ES的患者的频率为39%。肌肉的发现是最常见的ES(52%),而眼部表现较少见(11%)。对突变分布的分析揭示了(1)PH和接头结构域中的截短突变图,而错义突变位于5-磷酸酶结构域,并且仅偶尔在ASH-RhoGAP模块中;(2)五个OCRL突变同时引起DD2和LS表型;(3)密码子318是DD2突变热点;(4)在ES的存在与OCRL结构域上的突变位置之间发现了相关性。DD2不同于LS。突变位点和突变类型在很大程度上决定了DD2表型。
    Dent disease is a rare X-linked renal tubulopathy due to CLCN5 and OCRL (DD2) mutations. OCRL mutations also cause Lowe syndrome (LS) involving the eyes, brain and kidney. DD2 is frequently described as a mild form of LS because some patients may present with extra-renal symptoms (ESs). Since DD2 is a rare disease and there are a low number of reported cases, it is still unclear whether it has a clinical picture distinct from LS. We retrospectively analyzed the phenotype and genotype of our cohort of 35 DD2 males and reviewed all published DD2 cases. We analyzed the distribution of mutations along the OCRL gene and evaluated the type and frequency of ES according to the type of mutation and localization in OCRL protein domains. The frequency of patients with at least one ES was 39%. Muscle findings are the most common ES (52%), while ocular findings are less common (11%). Analysis of the distribution of mutations revealed (1) truncating mutations map in the PH and linker domain, while missense mutations map in the 5-phosphatase domain, and only occasionally in the ASH-RhoGAP module; (2) five OCRL mutations cause both DD2 and LS phenotypes; (3) codon 318 is a DD2 mutational hot spot; (4) a correlation was found between the presence of ES and the position of the mutations along OCRL domains. DD2 is distinct from LS. The mutation site and the mutation type largely determine the DD2 phenotype.
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  • 文章类型: Journal Article
    H syndrome is a rare autosomal recessive disorder with clinical features comprising: hyperpigmentation, hypertrichosis, hearing loss, heart anomalies, low height, hypogonadism and hepatosplenomegaly. H syndrome results from loss-of-function mutations in SLC29A3 which leads to abnormal proliferation and function of histiocytes. Herein, we discuss the considerable phenotypic heterogeneity detected in a consanguineous Egyptian family comprising of four affected siblings, two of which are monozygotic twin and the possible therapeutics. The phenotypic variability may be attributed to the role of histiocytes in the tissue response to injury. Such variable expressivity of H syndrome renders the diagnosis challenging and delays the management. The different treatment approaches used for this rare entity are reviewed.
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  • 文章类型: Journal Article
    近年来,一些酪氨酸激酶抑制剂(TKIs)已被批准用于治疗非小细胞肺癌。当与常规化疗剂相比时,这些新的治疗表现出改善的功效和毒性。TKIs口服给药,具有提高患者灵活性和方便性的优点。然而,在使用这些新型药剂时出现了挑战。由于每个患者的药代动力学差异很大,因此为肝或肾功能损害患者开具处方的药物对临床医生构成了挑战。此外,一些TKIs已被证明会导致实验室检查异常,通常与肝或肾损伤相关。本综述的目的是讨论肝肾功能损害对17种TKIs的药代动力学变异性及其潜在的肝毒性和肾毒性的影响。并推荐肝或肾损害患者的剂量调整。
    In recent years, a number of tyrosine kinase inhibitors (TKIs) have been approved for the treatment of non‑small cell lung cancer. These novel treatments exhibit improved efficacy and toxicity when compared to conventional chemotherapy agents. TKIs are administered orally, which has the advantages of improved flexibility and convenience for the patients. However, challenges have arisen in the use of these novel agents. Prescribing drugs for patients with hepatic or renal function impairment poses a challenge for clinicians due to the large pharmacokinetic variability in each individual patient. Moreover, several TKIs have been shown to cause laboratory test abnormalities normally associated with hepatic or renal injury. The aim of the present review was to discuss the effects of hepatic and renal function impairment on the pharmacokinetic variability of 17 TKIs and their potential hepatotoxicity and nephrotoxicity, and to recommend dose adjustment for patients with hepatic or renal impairment.
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  • 文章类型: Journal Article
    学生对精神卫生服务的需求持续增长,在COVID-19大流行期间,随着课程转向远程虚拟学习,大学正在寻求数字解决方案,以增加获得护理的机会。使用智能手机捕获与精神疾病有关的实时症状和行为,数字表型提供了一个实用的工具,以帮助大学远程监测和评估心理健康,并提供更定制和响应的护理。这篇对25项大学生数字表型研究的叙述性综述探讨了这种方法是如何部署的,研究并影响了心理健康结果。我们发现研究的平均持续时间为42天,平均参与者为81名。收集的最常见的基于传感器的流包括位置,加速度计和社交信息,这些信息被用来告知睡眠等行为,锻炼和社交互动。52%的研究还包括以某种形式收集智能手机调查,这些调查用于评估情绪,焦虑和压力在许多其他结果中。集体关注构建与睡眠相关的特征的数据,活动和社交互动表明,该领域已经适当地关注了大学生心理健康问题的主要驱动因素。虽然这些研究方法的异质性为移动设备提供自动化帮助提供了可靠的目标,但研究的可行性表明,今天使用这些数据进行个性化护理的潜力。随着更统一的数字表型研究的发展和扩展到更大的样本量,学生心理健康中心可能会考虑将这些数据整合到大学生的临床实践中。
    Experiencing continued growth in demand for mental health services among students, colleges are seeking digital solutions to increase access to care as classes shift to remote virtual learning during the COVID-19 pandemic. Using smartphones to capture real-time symptoms and behaviours related to mental illnesses, digital phenotyping offers a practical tool to help colleges remotely monitor and assess mental health and provide more customised and responsive care. This narrative review of 25 digital phenotyping studies with college students explored how this method has been deployed, studied and has impacted mental health outcomes. We found the average duration of studies to be 42 days and the average enrolled to be 81 participants. The most common sensor-based streams collected included location, accelerometer and social information and these were used to inform behaviours such as sleep, exercise and social interactions. 52% of the studies included also collected smartphone survey in some form and these were used to assess mood, anxiety and stress among many other outcomes. The collective focus on data that construct features related to sleep, activity and social interactions indicate that this field is already appropriately attentive to the primary drivers of mental health problems among college students. While the heterogeneity of the methods of these studies presents no reliable target for mobile devices to offer automated help-the feasibility across studies suggests the potential to use these data today towards personalising care. As more unified digital phenotyping research evolves and scales to larger sample sizes, student mental health centres may consider integrating these data into their clinical practice for college students.
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  • 文章类型: Journal Article
    OBJECTIVE: Evidence exists regarding the beneficial effects of diets rich in plant-based foods regarding the prevention of cardiometabolic diseases. These plant-based foods are an exclusive and abundant source of a variety of biologically active phytochemicals, including polyphenols, carotenoids, glucosinolates and phytosterols, with known health-promoting effects through a wide range of biological activities, such as improvements in endothelial function, platelet function, blood pressure, blood lipid profile and insulin sensitivity. We know that an individual\'s physical/genetic makeup may influence their response to a dietary intervention, and thereby may influence the benefit/risk associated with consumption of a particular dietary constituent. This inter-individual variation in responsiveness has also been described for dietary plant bioactives but has not been explored in depth. To address this issue, the European scientific experts involved in the COST Action POSITIVe systematically analyzed data from published studies to assess the inter-individual variation in selected clinical biomarkers associated with cardiometabolic risk, in response to the consumption of plant-based bioactives (poly)phenols and phytosterols. The present review summarizes the main findings resulting from the meta-analyses already completed.
    RESULTS: Meta-analyses of randomized controlled trials conducted within POSITIVe suggest that age, sex, ethnicity, pathophysiological status and medication may be responsible for the heterogeneity in the biological responsiveness to (poly)phenol and phytosterol consumption and could lead to inconclusive results in some clinical trials aiming to demonstrate the health effects of specific dietary bioactive compounds. However, the contribution of these factors is not yet demonstrated consistently across all polyphenolic groups and cardiometabolic outcomes, partly due to the heterogeneity in trial designs, low granularity of data reporting, variety of food vectors and target populations, suggesting the need to implement more stringent reporting practices in the future studies. Studies investigating the effects of genetic background or gut microbiome on variability were limited and should be considered in future studies.
    CONCLUSIONS: Understanding why some bioactive plant compounds work effectively in some individuals but not, or less, in others is crucial for a full consideration of these compounds in future strategies of personalized nutrition for a better prevention of cardiometabolic disease. However, there is also still a need for the development of a substantial evidence-base to develop health strategies, food products or lifestyle solutions that embrace this variability.
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  • 文章类型: Journal Article
    Therapeutic monoclonal antibodies (mAbs) are increasingly used to treat a variety of conditions. The sources of their interindividual pharmacokinetic (PK) variability have been extensively studied, but few data on their intraindividual PK variability are available. In this article, we reviewed the published population compartmental models used to describe the time-varying PK of mAbs in clinical settings. Of 189 publications, 13 report the use of time-varying parameters and 30 describe the effects of antidrug antibody (ADA) development. Currently published time-varying models mainly describe fast decreases in clearance due to target-mediated elimination or slow decreases in clearance owing to cachexia reduction. Immunogenicity models mostly describe \'on-off\' increases of clearance due to a rapid elimination of mAbs-ADA complexes. Some more sophisticated models attempted to decipher the time course of immunogenic response, notably by accounting for the time of onset and progressive increase in ADA production. Currently available time-varying and immunogenicity models are empirical approximations of the complex mAb disposition, but they emphasize the necessity to account for the temporal variations of mAb PK in model building. The clinical implications of the time-varying PK of mAbs are not fully understood, but some publications reported a link between clearance decrease and disease improvement. The future perspectives offered by this knowledge include the possibility to adapt the regimen to the disease and the patients\' state, and also to immune status, and to monitor their evolution by monitoring PK variations.
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  • 文章类型: Journal Article
    For several decades, laboratory evolution has served as a powerful method to manipulate microorganisms and to explore long-term dynamics in microbial populations. Next to canonical Escherichia coli planktonic cultures, experimental evolution has expanded into alternative cultivation methods and species, opening the doors to new research questions. Bacillus subtilis, the spore-forming and root-colonizing bacterium, can easily develop in the laboratory as a liquid-air interface colonizing pellicle biofilm. Here, we summarize recent findings derived from this tractable experimental model. Clonal pellicle biofilms of B. subtilis can rapidly undergo morphological and genetic diversification creating new ecological interactions, for example, exploitation by biofilm non-producers. Moreover, long-term exposure to such matrix non-producers can modulate cooperation in biofilms, leading to different phenotypic heterogeneity pattern of matrix production with larger subpopulation of \"ON\" cells. Alternatively, complementary variants of biofilm non-producers, each lacking a distinct matrix component, can engage in a genetic division of labor, resulting in superior biofilm productivity compared to the \"generalist\" wild type. Nevertheless, inter-genetic cooperation appears to be evanescent and rapidly vanquished by individual biofilm formation strategies altering the amount or the properties of the remaining matrix component. Finally, fast-evolving mobile genetic elements can unpredictably shift intra-species interactions in B. subtilis biofilms. Understanding evolution in clonal biofilm populations will facilitate future studies in complex multispecies biofilms that are more representative of nature.
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