Bacterioplankton

浮游细菌
  • 文章类型: Journal Article
    海洋浮游植物在分类单元中的大小差异很大,以及栖息地和生长状态下的细胞悬浮液密度。细胞悬浮液密度和总生物体积决定了浮游植物群落对其环境的总体影响。细胞悬浮密度也决定了浮游植物细胞彼此分离的细胞间距,或者来自共存的浮游细菌。细胞间间距然后决定了共现细胞间溶质交换的平均扩散路径。海洋浮游植物和浮游细菌都产生和清除活性氧(ROS),维持细胞内ROS稳态以支持其细胞过程,同时限制破坏性反应。在ROS中,过氧化氢(H2O2)具有相对较低的反应性,长的细胞内和细胞外寿命,并且容易穿过细胞膜。我们的目标是量化细胞如何通过扩散相互作用影响其他细胞,使用H2O2作为案例研究。为了可视化和限制H2O2的细胞间交换潜力,我们模拟了[H2O2]从代表性浮游植物类群向外减少,并将内部[H2O2]保持在代表性海水[H2O2]之上。从静态细胞表面向外的[H2O2]梯度由体积稀释主导,衰变的影响微不足道。模拟的[H2O2]下降到背景[H2O2]在〜3.1µm内,但从硅藻细胞表面向外延伸90微米。其他的更快衰减,不太稳定的ROS,会降低这些阈值距离。浮游细菌将模拟的局部[H2O2]降低到背景以下,仅从静态细胞表面到1.2µm,即使浮游细菌共同影响海水ROS。细胞周围的这些小的扩散球意味着H2O2的直接细胞与细胞交换不太可能发生在具有广泛间隔的寡营养习惯中,小细胞;富营养化习性适中,细胞间间距较短;但在浮游植物菌落内广泛存在。
    Marine phytoplankton vary widely in size across taxa, and in cell suspension densities across habitats and growth states. Cell suspension density and total biovolume determine the bulk influence of a phytoplankton community upon its environment. Cell suspension density also determines the intercellular spacings separating phytoplankton cells from each other, or from co-occurring bacterioplankton. Intercellular spacing then determines the mean diffusion paths for exchanges of solutes among co-occurring cells. Marine phytoplankton and bacterioplankton both produce and scavenge reactive oxygen species (ROS), to maintain intracellular ROS homeostasis to support their cellular processes, while limiting damaging reactions. Among ROS, hydrogen peroxide (H2O2) has relatively low reactivity, long intracellular and extracellular lifetimes, and readily crosses cell membranes. Our objective was to quantify how cells can influence other cells via diffusional interactions, using H2O2 as a case study. To visualize and constrain potentials for cell-to-cell exchanges of H2O2, we simulated the decrease of [H2O2] outwards from representative phytoplankton taxa maintaining internal [H2O2] above representative seawater [H2O2]. [H2O2] gradients outwards from static cell surfaces were dominated by volumetric dilution, with only a negligible influence from decay. The simulated [H2O2] fell to background [H2O2] within ~3.1 µm from a Prochlorococcus cell surface, but extended outwards 90 µm from a diatom cell surface. More rapid decays of other, less stable ROS, would lower these threshold distances. Bacterioplankton lowered simulated local [H2O2] below background only out to 1.2 µm from the surface of a static cell, even though bacterioplankton collectively act to influence seawater ROS. These small diffusional spheres around cells mean that direct cell-to-cell exchange of H2O2 is unlikely in oligotrophic habits with widely spaced, small cells; moderate in eutrophic habits with shorter cell-to-cell spacing; but extensive within phytoplankton colonies.
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  • 文章类型: Journal Article
    River damming has raised controversial concerns as it simultaneously contributes to socioeconomic development but may jeopardize aquatic ecology. Since bacterioplankton catalyze vital biogeochemical reactions and play important roles in aquatic ecosystems, more attention has been paid to their responses in dammed rivers. Here, a comparative study was conducted between single-dammed (the Yarlung Tsangpo River) and cascade-dammed (the Lancang River) rivers in Southwest China to investigate whether bacterioplankton respond equally to different river regulations. Our results showed that the decreased bacterioplankton abundance and the increased α-diversity always co-occurred in reservoirs of the Yarlung Tsangpo River and the Lancang River. However, the impact of damming on bacterioplankton abundance and α-diversity were resilient in the Lancang River, which can be attributed to the repeated alterations of environmental heterogeneity in cascade damming reaches. Meanwhile, a generalized additive model (GAM) was applied to identify the important drivers affecting bacterioplankton variation. The abundance was influenced by trophic conditions, such as dissolved silicon, while α-diversity was closely related to the microbial dispersal process, such as elevation and distance-from source. And it is also noted that the bacterioplankton dispersal process was interrupted in cascade damming reaches. In addition, based on their important drivers, variations in abundance and α-diversity were also predicted by GAM. As revealed by the quantitative mutual validation between the two rivers, abundance and α-diversity in the cascade-dammed river can be predicted by their response to single-dammed river, suggesting that the impact of cascade damming on bacterioplankton can be pre-assessed by referring to the single stage damming effect. Therefore, our study provides the first trial of quantitative evidence that bacterioplankton do not respond equally to different river regulations, and the impact of cascade damming on bacterioplankton can be predicted based on single stage damming effect, which can contribute to the protection of aquatic ecology in the cascade hydropower development.
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  • 文章类型: Journal Article
    为了确定地理距离的影响,深度,研究了Longhurstian省的细菌群落组成,并将其与光合微真核生物群落组成进行了比较,通过Illumina扩增子测序分析了来自大西洋上层带的深度分辨纬度样带(51°S-47°N)的382个样品。在海洋的100米上,群落相似性向赤道下降了6000公里,但随后又增加了,对于间隔约12,000公里的样本,相似度值达到40-60%,产生U形的距离衰减曲线。我们得出的结论是,适应当地条件可以覆盖大西洋上表层的线性距离-衰减关系,这显然不受扩散障碍的限制,因为相同的类群在最遥远的社区之间共享。样带覆盖的六个Longhurstian省由不同的微生物群落组成;约30%的群落组成变化可以由省解释。属于上层带(140-200m)较深层的细菌群落完全缺乏距离衰减关系,几乎没有地方主义。有趣的是,这些生物地理模式是一致发现的细菌来自三个不同大小的部分的浮游生物具有不同的分类组成,表明保守的潜在机制。对叶绿体16SrRNA基因序列的分析表明,浮游植物的组成与自由生活和颗粒相关的细菌群落组成密切相关(R在0.51和0.62之间,p<0.002)。数据表明,宏观生态学中常见的生物地理模式不适用于海洋浮游细菌,很可能是因为细菌的扩散和进化速度截然不同。
    In order to determine the influence of geographical distance, depth, and Longhurstian province on bacterial community composition and compare it with the composition of photosynthetic micro-eukaryote communities, 382 samples from a depth-resolved latitudinal transect (51°S-47°N) from the epipelagic zone of the Atlantic ocean were analyzed by Illumina amplicon sequencing. In the upper 100 m of the ocean, community similarity decreased toward the equator for 6000 km, but subsequently increased again, reaching similarity values of 40-60% for samples that were separated by ~12,000 km, resulting in a U-shaped distance-decay curve. We conclude that adaptation to local conditions can override the linear distance-decay relationship in the upper epipelagial of the Atlantic Ocean which is apparently not restrained by barriers to dispersal, since the same taxa were shared between the most distant communities. The six Longhurstian provinces covered by the transect were comprised of distinct microbial communities; ~30% of variation in community composition could be explained by province. Bacterial communities belonging to the deeper layer of the epipelagic zone (140-200 m) lacked a distance-decay relationship altogether and showed little provincialism. Interestingly, those biogeographical patterns were consistently found for bacteria from three different size fractions of the plankton with different taxonomic composition, indicating conserved underlying mechanisms. Analysis of the chloroplast 16S rRNA gene sequences revealed that phytoplankton composition was strongly correlated with both free-living and particle associated bacterial community composition (R between 0.51 and 0.62, p < 0.002). The data show that biogeographical patterns commonly found in macroecology do not hold for marine bacterioplankton, most likely because dispersal and evolution occur at drastically different rates in bacteria.
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