儿童肥胖是最常见和最昂贵的营养问题之一,具有高遗传性。儿童肥胖的遗传机制尚不清楚。这里,我们进行了一项全转录组关联研究(TWAS),以鉴定儿童肥胖的新基因.
通过整合儿童体重指数(BMI)的GWAS摘要,我们在39个肥胖优先组织中使用预先计算的基因表达权重进行了TWAS分析.儿童BMI的GWAS汇总统计数据来自早期生长遗传学联盟,来自20项研究的35,668名儿童。
在Bonferroni校正后,我们确定了15个儿童BMI的候选基因。最重要的基因,ADCY3,在13个组织中被鉴定,包括脂肪,大脑,还有血.有趣的是,仅在特定组织中鉴定了八个基因,例如大脑中的FAIM2(P=2.04×10-7)和肌肉中的脂肪量和肥胖相关基因(FTO)(P=1.93×10-8)。与成人BMI的TWAS结果相比,我们发现一个基因TUBA1B仅对儿童肌肉中的BMI有主要影响(P=1.12×10-7)。我们通过查询公共数据库评估了候选基因,并确定了12个与肥胖表型功能相关的基因。包括人类前脂肪细胞分化过程中的9个差异表达基因。其余基因(FAM150B,KNOP1和LMBR1L)被认为是儿童BMI的新候选基因。
我们的研究确定了儿童BMI的多个候选基因,为理解儿童肥胖的遗传机制提供了新的线索。
Childhood obesity is one of the most common and costly nutritional problems with high heritability. The genetic mechanism of childhood obesity remains unclear. Here, we conducted a transcriptome-wide association
study (TWAS) to identify novel genes for childhood obesity.
By integrating the GWAS summary of childhood body mass index (BMI), we conducted TWAS analyses with pre-computed gene expression weights in 39 obesity priority tissues. The GWAS summary statistics of childhood BMI were derived from the early growth genetics consortium with 35,668 children from 20 studies.
We identified 15 candidate genes for childhood BMI after Bonferroni corrections. The most significant gene, ADCY3, was identified in 13 tissues, including adipose, brain, and blood. Interestingly, eight genes were only identified in the specific tissue, such as FAIM2 in the brain (P = 2.04 × 10-7) and fat mass and obesity-associated gene (FTO) in the muscle (P = 1.93 × 10-8). Compared with the TWAS results of adult BMI, we found that one gene TUBA1B with predominant influence only on childhood BMI in the muscle (P = 1.12 × 10-7). We evaluated the candidate genes by querying public databases and identified 12 genes functionally related to obesity phenotypes, including nine differentially expressed genes during the differentiation of human preadipocyte cells. The remaining genes (FAM150B, KNOP1, and LMBR1L) were regarded as novel candidate genes for childhood BMI.
Our
study identified multiple candidate genes for childhood BMI, providing novel clues for understanding the genetic mechanism of childhood obesity.