关键词: Alpha-synuclein Genome-wide association studies (GWAS) Parkinson’s disease SNCA112 mRNA miR-4697-3p rs329638

Mesh : Humans Alleles alpha-Synuclein / genetics metabolism Cell Line, Tumor CRISPR-Cas Systems / genetics Gene Editing / methods Gene Expression Regulation / genetics Genetic Predisposition to Disease Genome-Wide Association Study MicroRNAs / genetics metabolism Parkinson Disease / genetics metabolism Polymorphism, Single Nucleotide / genetics RNA, Messenger / genetics metabolism

来  源:   DOI:10.1007/s11033-024-09725-w

Abstract:
BACKGROUND: Parkinson\'s disease (PD) is a common neurodegenerative disorder characterized by a multifaceted genetic foundation. Genome-Wide Association Studies (GWAS) have played a crucial role in pinpointing genetic variants linked to PD susceptibility. Current study aims to delve into the mechanistic aspects through which the PD-associated Single Nucleotide Polymorphism (SNP) rs329648, identified in prior GWAS, influences the pathogenesis of PD.
RESULTS: Employing the CRISPR/Cas9-mediated genome editing mechanism, we demonstrated the association of the disease-associated allele of rs329648 with increased expression of miR-4697-3p in differentiated SH-SY5Y cells. We revealed that miR-4697-3p contributes to the formation of high molecular weight complexes of α-Synuclein (α-Syn), indicative of α-Syn aggregate formation, as evidenced by Western blot analysis. Furthermore, our study unveiled that miR-4697-3p elevates SNCA112 mRNA levels. The resultant protein product, α-Syn 112, a variant of α-Syn with 112 amino acids, is recognized for augmenting α-Syn aggregation. Notably, this regulatory effect minimally impacts the levels of full-length SNCA140 mRNA, as evidenced by qRT-PCR. Additionally, we observed a correlation between the disease-associated allele and miR-4697-3p with increased cell death, substantiated by assessments including cell viability assays, alterations in cell morphology, and TUNEL assays.
CONCLUSIONS: Our research reveals that the disease-associated allele of rs329648 is linked to higher levels of miR-4697-3p. This increase in miR-4697-3p leads to elevated SNCA112 mRNA levels, consequently promoting the formation of α-Syn aggregates. Furthermore, miR-4697-3p appears to play a role in increased cell death, potentially contributing to the pathogenesis of PD.
摘要:
背景:帕金森病(PD)是一种常见的神经退行性疾病,具有多方面的遗传基础。全基因组关联研究(GWAS)在确定与PD易感性相关的遗传变异方面发挥了至关重要的作用。当前的研究旨在深入研究与PD相关的单核苷酸多态性(SNP)rs329648,在先前的GWAS中确定的机制方面,影响PD的发病机制。
结果:采用CRISPR/Cas9介导的基因组编辑机制,我们证明了rs329648的疾病相关等位基因与分化SH-SY5Y细胞中miR-4697-3p表达增加相关.我们发现miR-4697-3p有助于α-突触核蛋白(α-Syn)的高分子量复合物的形成,指示α-Syn聚集体形成,如Western印迹分析所证明的。此外,我们的研究揭示miR-4697-3p可提高SNCA112mRNA水平.所得的蛋白质产品,α-Syn112,具有112个氨基酸的α-Syn变体,被认为可以增强α-Syn聚集。值得注意的是,这种调节作用对全长SNCA140mRNA的水平影响最小,如qRT-PCR所证明。此外,我们观察到疾病相关等位基因和miR-4697-3p与细胞死亡增加之间的相关性,通过包括细胞活力测定在内的评估得到证实,细胞形态的改变,和TUNEL检测。
结论:我们的研究表明,rs329648的疾病相关等位基因与更高水平的miR-4697-3p相关。miR-4697-3p的增加导致SNCA112mRNA水平升高,从而促进α-Syn聚集体的形成。此外,miR-4697-3p似乎在增加细胞死亡中起作用,可能导致PD的发病机制。
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